RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 RRP36Q96EU6 259 aaKnown RBP16.93■□□□□ 0.3
SGCA-211ENST00000514934 SCLYQ96I15 445 aa16.93■□□□□ 0.3
SGCA-211ENST00000514934 CCDC69A6NI79 296 aa16.92■□□□□ 0.3
SGCA-211ENST00000514934 GRXCR1A8MXD5 290 aa16.92■□□□□ 0.3
SGCA-211ENST00000514934 SPATA31C2B4DYI2 1134 aa16.92■□□□□ 0.3
SGCA-211ENST00000514934 CALM1P0DP23 149 aa16.92■□□□□ 0.3
SGCA-211ENST00000514934 CALM2P0DP24 149 aa16.92■□□□□ 0.3
SGCA-211ENST00000514934 CALM3P0DP25 149 aa16.92■□□□□ 0.3
SGCA-211ENST00000514934 TGFB3P10600 412 aa16.92■□□□□ 0.3
SGCA-211ENST00000514934 CCND2P30279 289 aa16.92■□□□□ 0.3
SGCA-211ENST00000514934 HOXC8P31273 242 aa16.92■□□□□ 0.3
SGCA-211ENST00000514934 HSPA4P34932 840 aa16.92■□□□□ 0.3
SGCA-211ENST00000514934 PBX2P40425 430 aa16.92■□□□□ 0.3
SGCA-211ENST00000514934 GNAQP50148 359 aa16.92■□□□□ 0.3
SGCA-211ENST00000514934 RBL2Q08999 1139 aa16.92■□□□□ 0.3
SGCA-211ENST00000514934 LAMC2Q13753 1193 aa16.92■□□□□ 0.3
SGCA-211ENST00000514934 PSRC1Q6PGN9 363 aaPredicted RBP16.92■□□□□ 0.3
SGCA-211ENST00000514934 TRAF7Q6Q0C0 670 aa16.92■□□□□ 0.3
SGCA-211ENST00000514934 MICU3Q86XE3 530 aa16.92■□□□□ 0.3
SGCA-211ENST00000514934 CCDC136Q96JN2 1154 aa16.92■□□□□ 0.3
SGCA-211ENST00000514934 C16orf70Q9BSU1 422 aa16.92■□□□□ 0.3
SGCA-211ENST00000514934 SLC12A7Q9Y666 1083 aa16.92■□□□□ 0.3
SGCA-211ENST00000514934 TMEM265A0A087WTH1 108 aa16.91■□□□□ 0.3
SGCA-211ENST00000514934 PITPNM1O00562 1244 aa16.91■□□□□ 0.3
SGCA-211ENST00000514934 GGPS1O95749 300 aa16.91■□□□□ 0.3
SGCA-211ENST00000514934 ZNF286BP0CG31 522 aa16.91■□□□□ 0.3
SGCA-211ENST00000514934 CPA1P15085 419 aa16.91■□□□□ 0.3
SGCA-211ENST00000514934 TRIM71Q2Q1W2 868 aaKnown RBP16.91■□□□□ 0.3
SGCA-211ENST00000514934 BRDTQ58F21 947 aaPredicted RBP16.91■□□□□ 0.3
SGCA-211ENST00000514934 RNF20Q5VTR2 975 aa16.91■□□□□ 0.3
SGCA-211ENST00000514934 NFXL1Q6ZNB6 911 aa16.91■□□□□ 0.3
SGCA-211ENST00000514934 WNT8BQ93098 351 aa16.91■□□□□ 0.3
SGCA-211ENST00000514934 FAM161BQ96MY7 647 aa16.91■□□□□ 0.3
SGCA-211ENST00000514934 AGXT2Q9BYV1 514 aa16.91■□□□□ 0.3
SGCA-211ENST00000514934 GTF2IRD1Q9UHL9 959 aa16.91■□□□□ 0.3
SGCA-211ENST00000514934 SNX14Q9Y5W7 946 aa16.91■□□□□ 0.3
SGCA-211ENST00000514934 TTC28Q96AY4 2481 aa16.9■□□□□ 0.3
SGCA-211ENST00000514934 MYH9P35579 1960 aaKnown RBP16.9■□□□□ 0.3
SGCA-211ENST00000514934 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.9■□□□□ 0.3
SGCA-211ENST00000514934 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.9■□□□□ 0.3
SGCA-211ENST00000514934 SUPT20HL2P0C7V6 817 aa16.9■□□□□ 0.3
SGCA-211ENST00000514934 DNAJB2P25686 324 aa16.9■□□□□ 0.3
SGCA-211ENST00000514934 CDC27P30260 824 aa16.9■□□□□ 0.3
SGCA-211ENST00000514934 PSEN2P49810 448 aa16.9■□□□□ 0.3
SGCA-211ENST00000514934 DGKDQ16760 1214 aa16.9■□□□□ 0.3
SGCA-211ENST00000514934 ZNF697Q5TEC3 545 aa16.9■□□□□ 0.3
SGCA-211ENST00000514934 PCNX4Q63HM2 1172 aa16.9■□□□□ 0.3
SGCA-211ENST00000514934 WWC2Q6AWC2 1192 aa16.9■□□□□ 0.3
SGCA-211ENST00000514934 KCNV1Q6PIU1 500 aa16.9■□□□□ 0.3
SGCA-211ENST00000514934 FBXL16Q8N461 479 aa16.9■□□□□ 0.3
SGCA-211ENST00000514934 CDX2Q99626 313 aaPredicted RBP16.9■□□□□ 0.3
SGCA-211ENST00000514934 PBX4Q9BYU1 374 aa16.9■□□□□ 0.3
SGCA-211ENST00000514934 HDAC6Q9UBN7 1215 aa16.9■□□□□ 0.3
SGCA-211ENST00000514934 COL4A4P53420 1690 aaPredicted RBP16.89■□□□□ 0.29
SGCA-211ENST00000514934 SORBS3O60504 671 aa16.89■□□□□ 0.29
SGCA-211ENST00000514934 PPFIA4O75335 1185 aa16.89■□□□□ 0.29
SGCA-211ENST00000514934 STAM2O75886 525 aa16.89■□□□□ 0.29
SGCA-211ENST00000514934 IQCF3P0C7M6 154 aa16.89■□□□□ 0.29
SGCA-211ENST00000514934 CASTP20810 708 aaKnown RBP16.89■□□□□ 0.29
SGCA-211ENST00000514934 FAM47CQ5HY64 1035 aa16.89■□□□□ 0.29
SGCA-211ENST00000514934 DHX37Q8IY37 1157 aaKnown RBP16.89■□□□□ 0.29
SGCA-211ENST00000514934 MUC3AQ02505 3323 aa16.89■□□□□ 0.29
SGCA-211ENST00000514934 ADAMTS3O15072 1205 aa16.88■□□□□ 0.29
SGCA-211ENST00000514934 ITGB5P18084 799 aa16.88■□□□□ 0.29
SGCA-211ENST00000514934 RCAN1P53805 252 aa16.88■□□□□ 0.29
SGCA-211ENST00000514934 MFSD10Q14728 455 aa16.88■□□□□ 0.29
SGCA-211ENST00000514934 UBE2SQ16763 222 aa16.88■□□□□ 0.29
SGCA-211ENST00000514934 TCTN1Q2MV58 587 aa16.88■□□□□ 0.29
SGCA-211ENST00000514934 OTOP2Q7RTS6 562 aa16.88■□□□□ 0.29
SGCA-211ENST00000514934 CCDC82Q8N4S0 544 aa16.88■□□□□ 0.29
SGCA-211ENST00000514934 SPATA33Q96N06 139 aa16.88■□□□□ 0.29
SGCA-211ENST00000514934 SEC63Q9UGP8 760 aaKnown RBP16.88■□□□□ 0.29
SGCA-211ENST00000514934 YBX2Q9Y2T7 364 aaKnown RBP16.88■□□□□ 0.29
SGCA-211ENST00000514934 PRRC2BQ5JSZ5 2229 aaKnown RBP16.88■□□□□ 0.29
SGCA-211ENST00000514934 XIRP2A4UGR9 3374 aa16.88■□□□□ 0.29
SGCA-211ENST00000514934 EVPLQ92817 2033 aa16.87■□□□□ 0.29
SGCA-211ENST00000514934 BRWD1Q9NSI6 2320 aa16.87■□□□□ 0.29
SGCA-211ENST00000514934 STXBP3O00186 592 aa16.87■□□□□ 0.29
SGCA-211ENST00000514934 ZBTB43O43298 467 aa16.87■□□□□ 0.29
SGCA-211ENST00000514934 ATP9AO75110 1047 aa16.87■□□□□ 0.29
SGCA-211ENST00000514934 FGBP02675 491 aa16.87■□□□□ 0.29
SGCA-211ENST00000514934 KCNA2P16389 499 aa16.87■□□□□ 0.29
SGCA-211ENST00000514934 ZNF200P98182 395 aaPredicted RBP16.87■□□□□ 0.29
SGCA-211ENST00000514934 KRT32Q14532 448 aa16.87■□□□□ 0.29
SGCA-211ENST00000514934 MBTPS1Q14703 1052 aa16.87■□□□□ 0.29
SGCA-211ENST00000514934 GRIN2CQ14957 1233 aa16.87■□□□□ 0.29
SGCA-211ENST00000514934 PTGISQ16647 500 aa16.87■□□□□ 0.29
SGCA-211ENST00000514934 KIAA0753Q2KHM9 967 aa16.87■□□□□ 0.29
SGCA-211ENST00000514934 XRRA1Q6P2D8 792 aa16.87■□□□□ 0.29
SGCA-211ENST00000514934 METTL7BQ6UX53 244 aa16.87■□□□□ 0.29
SGCA-211ENST00000514934 GPR20Q99678 358 aa16.87■□□□□ 0.29
SGCA-211ENST00000514934 PSTPIP2Q9H939 334 aa16.87■□□□□ 0.29
SGCA-211ENST00000514934 RTEL1Q9NZ71 1219 aa16.87■□□□□ 0.29
SGCA-211ENST00000514934 UBIAD1Q9Y5Z9 338 aa16.87■□□□□ 0.29
SGCA-211ENST00000514934 ATG2AQ2TAZ0 1938 aa16.87■□□□□ 0.29
SGCA-211ENST00000514934 NCOR1O75376 2440 aa16.87■□□□□ 0.29
SGCA-211ENST00000514934 KLF18A0A0U1RQI7 1052 aa16.86■□□□□ 0.29
SGCA-211ENST00000514934 FIBPO43427 364 aa16.86■□□□□ 0.29
SGCA-211ENST00000514934 LGALS2P05162 132 aa16.86■□□□□ 0.29
SGCA-211ENST00000514934 RFC2P35250 354 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms