RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 B4GALT4O60513 344 aa6.69□□□□□ -1.34
NEDD4-211ENST00000514893 CASP7P55210 303 aa6.69□□□□□ -1.34
NEDD4-211ENST00000514893 RACK1P63244 317 aaKnown RBP6.69□□□□□ -1.34
NEDD4-211ENST00000514893 PAK2Q13177 524 aa6.69□□□□□ -1.34
NEDD4-211ENST00000514893 E4F1Q66K89 784 aaPredicted RBP6.69□□□□□ -1.34
NEDD4-211ENST00000514893 VHLLQ6RSH7 139 aa6.69□□□□□ -1.34
NEDD4-211ENST00000514893 KLHL36Q8N4N3 616 aa6.69□□□□□ -1.34
NEDD4-211ENST00000514893 MBD6Q96DN6 1003 aa6.69□□□□□ -1.34
NEDD4-211ENST00000514893 TMEM209Q96SK2 561 aa6.69□□□□□ -1.34
NEDD4-211ENST00000514893 BARX1Q9HBU1 254 aaPredicted RBP6.69□□□□□ -1.34
NEDD4-211ENST00000514893 FTSJ1Q9UET6 329 aa6.69□□□□□ -1.34
NEDD4-211ENST00000514893 ZNF652Q9Y2D9 606 aa6.69□□□□□ -1.34
NEDD4-211ENST00000514893 HS3ST3A1Q9Y663 406 aa6.69□□□□□ -1.34
NEDD4-211ENST00000514893 ZNF623O75123 536 aa6.68□□□□□ -1.34
NEDD4-211ENST00000514893 SELENOPP49908 381 aa6.68□□□□□ -1.34
NEDD4-211ENST00000514893 MLLT6P55198 1093 aaPredicted RBP6.68□□□□□ -1.34
NEDD4-211ENST00000514893 GTF2IRD2BQ6EKJ0 949 aa6.68□□□□□ -1.34
NEDD4-211ENST00000514893 GTF2IRD2Q86UP8 949 aa6.68□□□□□ -1.34
NEDD4-211ENST00000514893 FRS2Q8WU20 508 aa6.68□□□□□ -1.34
NEDD4-211ENST00000514893 CPLX3Q8WVH0 158 aa6.68□□□□□ -1.34
NEDD4-211ENST00000514893 TMEM169Q96HH4 297 aa6.68□□□□□ -1.34
NEDD4-211ENST00000514893 PCED1AQ9H1Q7 454 aa6.68□□□□□ -1.34
NEDD4-211ENST00000514893 APEX2Q9UBZ4 518 aa6.68□□□□□ -1.34
NEDD4-211ENST00000514893 ZDHHC9Q9Y397 364 aa6.68□□□□□ -1.34
NEDD4-211ENST00000514893 PATE3B3GLJ2 98 aa6.67□□□□□ -1.34
NEDD4-211ENST00000514893 MUSKO15146 869 aa6.67□□□□□ -1.34
NEDD4-211ENST00000514893 ZNF16P17020 682 aaPredicted RBP6.67□□□□□ -1.34
NEDD4-211ENST00000514893 FPR2P25090 351 aa6.67□□□□□ -1.34
NEDD4-211ENST00000514893 HS1BP3Q53T59 392 aa6.67□□□□□ -1.34
NEDD4-211ENST00000514893 TRIM59Q8IWR1 403 aa6.67□□□□□ -1.34
NEDD4-211ENST00000514893 PALM2Q8IXS6 379 aa6.67□□□□□ -1.34
NEDD4-211ENST00000514893 Q8N1Y9 231 aa6.67□□□□□ -1.34
NEDD4-211ENST00000514893 DIO2Q92813 273 aa6.67□□□□□ -1.34
NEDD4-211ENST00000514893 NKX2-4Q9H2Z4 354 aa6.67□□□□□ -1.34
NEDD4-211ENST00000514893 CROTQ9UKG9 612 aa6.67□□□□□ -1.34
NEDD4-211ENST00000514893 BCL6P41182 706 aa6.66□□□□□ -1.34
NEDD4-211ENST00000514893 NFATC3Q12968 1075 aa6.66□□□□□ -1.34
NEDD4-211ENST00000514893 NPLOC4Q8TAT6 608 aa6.66□□□□□ -1.34
NEDD4-211ENST00000514893 PPP1R14AQ96A00 147 aa6.66□□□□□ -1.34
NEDD4-211ENST00000514893 DTLQ9NZJ0 730 aa6.66□□□□□ -1.34
NEDD4-211ENST00000514893 H7BY64 318 aa6.65□□□□□ -1.34
NEDD4-211ENST00000514893 HOXC12P31275 282 aa6.65□□□□□ -1.34
NEDD4-211ENST00000514893 NCAPHQ15003 741 aa6.65□□□□□ -1.34
NEDD4-211ENST00000514893 STEAP3Q658P3 488 aa6.65□□□□□ -1.34
NEDD4-211ENST00000514893 TRMT10BQ6PF06 316 aaKnown RBP6.65□□□□□ -1.34
NEDD4-211ENST00000514893 TEPPQ6URK8 271 aa6.65□□□□□ -1.34
NEDD4-211ENST00000514893 CCDC140Q96MF4 163 aa6.65□□□□□ -1.34
NEDD4-211ENST00000514893 PCDHB4Q9Y5E5 795 aa6.65□□□□□ -1.34
NEDD4-211ENST00000514893 TADA3O75528 432 aa6.64□□□□□ -1.35
NEDD4-211ENST00000514893 KCNAB2Q13303 367 aa6.64□□□□□ -1.35
NEDD4-211ENST00000514893 CRB2Q5IJ48 1285 aa6.64□□□□□ -1.35
NEDD4-211ENST00000514893 ARRDC4Q8NCT1 418 aa6.64□□□□□ -1.35
NEDD4-211ENST00000514893 RASGRP4Q8TDF6 673 aa6.64□□□□□ -1.35
NEDD4-211ENST00000514893 GPRASP2Q96D09 838 aa6.64□□□□□ -1.35
NEDD4-211ENST00000514893 MRGPRX3Q96LB0 322 aa6.64□□□□□ -1.35
NEDD4-211ENST00000514893 ZSWIM3Q96MP5 696 aa6.64□□□□□ -1.35
NEDD4-211ENST00000514893 WWC2-AS2Q96NR7 200 aa6.64□□□□□ -1.35
NEDD4-211ENST00000514893 ZNF341Q9BYN7 854 aa6.64□□□□□ -1.35
NEDD4-211ENST00000514893 TCRBV5S2A0A599 114 aa6.63□□□□□ -1.35
NEDD4-211ENST00000514893 MEFVO15553 781 aaPredicted RBP6.63□□□□□ -1.35
NEDD4-211ENST00000514893 MAFKO60675 156 aa6.63□□□□□ -1.35
NEDD4-211ENST00000514893 DGKIO75912 1065 aa6.63□□□□□ -1.35
NEDD4-211ENST00000514893 TGFB2P61812 414 aa6.63□□□□□ -1.35
NEDD4-211ENST00000514893 LSAMPQ13449 338 aa6.63□□□□□ -1.35
NEDD4-211ENST00000514893 R3HDM1Q15032 1099 aaKnown RBP6.63□□□□□ -1.35
NEDD4-211ENST00000514893 Q8TCH9 128 aa6.63□□□□□ -1.35
NEDD4-211ENST00000514893 SHDQ96IW2 340 aa6.63□□□□□ -1.35
NEDD4-211ENST00000514893 CHAMP1Q96JM3 812 aa6.63□□□□□ -1.35
NEDD4-211ENST00000514893 PTPN18Q99952 460 aa6.63□□□□□ -1.35
NEDD4-211ENST00000514893 HSPBP1Q9NZL4 362 aa6.63□□□□□ -1.35
NEDD4-211ENST00000514893 CPP00450 1065 aa6.62□□□□□ -1.35
NEDD4-211ENST00000514893 LRG1P02750 347 aa6.62□□□□□ -1.35
NEDD4-211ENST00000514893 SPDYAQ5MJ70 313 aa6.62□□□□□ -1.35
NEDD4-211ENST00000514893 PHOSPHO1Q8TCT1 267 aa6.62□□□□□ -1.35
NEDD4-211ENST00000514893 ZCCHC14Q8WYQ9 949 aaKnown RBP6.62□□□□□ -1.35
NEDD4-211ENST00000514893 SEC61A2Q9H9S3 476 aa6.62□□□□□ -1.35
NEDD4-211ENST00000514893 ADAM29Q9UKF5 820 aa6.62□□□□□ -1.35
NEDD4-211ENST00000514893 SCAMP3O14828 347 aaKnown RBP6.61□□□□□ -1.35
NEDD4-211ENST00000514893 EMC4Q5J8M3 183 aa6.61□□□□□ -1.35
NEDD4-211ENST00000514893 ACBD5Q5T8D3 534 aaPredicted RBP6.61□□□□□ -1.35
NEDD4-211ENST00000514893 NLRP10Q86W26 655 aa6.61□□□□□ -1.35
NEDD4-211ENST00000514893 CCDC103Q8IW40 242 aa6.61□□□□□ -1.35
NEDD4-211ENST00000514893 TRIM48Q8IWZ4 208 aa6.61□□□□□ -1.35
NEDD4-211ENST00000514893 SMOC1Q9H4F8 434 aa6.61□□□□□ -1.35
NEDD4-211ENST00000514893 CHGBP05060 677 aa6.6□□□□□ -1.35
NEDD4-211ENST00000514893 SCG5P05408 212 aa6.6□□□□□ -1.35
NEDD4-211ENST00000514893 SNRPB2P08579 225 aaKnown RBP6.6□□□□□ -1.35
NEDD4-211ENST00000514893 LTBRP36941 435 aa6.6□□□□□ -1.35
NEDD4-211ENST00000514893 ECI1P42126 302 aa6.6□□□□□ -1.35
NEDD4-211ENST00000514893 NASPP49321 788 aaPredicted RBP6.6□□□□□ -1.35
NEDD4-211ENST00000514893 KLF10Q13118 480 aa6.6□□□□□ -1.35
NEDD4-211ENST00000514893 PRKD1Q15139 912 aaPredicted RBP6.6□□□□□ -1.35
NEDD4-211ENST00000514893 TESK1Q15569 626 aa6.6□□□□□ -1.35
NEDD4-211ENST00000514893 RCBTB1Q8NDN9 531 aa6.6□□□□□ -1.35
NEDD4-211ENST00000514893 SEC16BQ96JE7 1060 aa6.6□□□□□ -1.35
NEDD4-211ENST00000514893 LRP2BPQ9P2M1 347 aa6.6□□□□□ -1.35
NEDD4-211ENST00000514893 TMEFF2Q9UIK5 374 aaPredicted RBP6.6□□□□□ -1.35
NEDD4-211ENST00000514893 PCDHA2Q9Y5H9 948 aa6.6□□□□□ -1.35
NEDD4-211ENST00000514893 ARNTLO00327 626 aa6.59□□□□□ -1.35
NEDD4-211ENST00000514893 CYP4F3Q08477 520 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms