RNA–Protein interactions for RNA: ENST00000514387.6

GPBP1-208, Transcript of GC-rich promoter binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPBP1, Length 3,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-208ENST00000514387 KCTD16Q68DU8 428 aa9.67□□□□□ -0.86
GPBP1-208ENST00000514387 FAAH2Q6GMR7 532 aa9.67□□□□□ -0.86
GPBP1-208ENST00000514387 SGMS1Q86VZ5 419 aa9.67□□□□□ -0.86
GPBP1-208ENST00000514387 PPP2R3CQ969Q6 453 aa9.67□□□□□ -0.86
GPBP1-208ENST00000514387 CHMP6Q96FZ7 201 aa9.67□□□□□ -0.86
GPBP1-208ENST00000514387 IFT74Q96LB3 600 aa9.67□□□□□ -0.86
GPBP1-208ENST00000514387 NSRP1Q9H0G5 558 aaKnown RBP9.67□□□□□ -0.86
GPBP1-208ENST00000514387 NRDE2Q9H7Z3 1164 aa9.67□□□□□ -0.86
GPBP1-208ENST00000514387 KCNMB3Q9NPA1 279 aa9.67□□□□□ -0.86
GPBP1-208ENST00000514387 PPANQ9NQ55 473 aaKnown RBP9.67□□□□□ -0.86
GPBP1-208ENST00000514387 TRIM10Q9UDY6 481 aa9.67□□□□□ -0.86
GPBP1-208ENST00000514387 TMED5Q9Y3A6 229 aa9.67□□□□□ -0.86
GPBP1-208ENST00000514387 GOLGA8AA7E2F4 631 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 SRGNP10124 158 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 HOXA7P31268 230 aaPredicted RBP9.66□□□□□ -0.86
GPBP1-208ENST00000514387 ACCSLQ4AC99 568 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 SESTD1Q86VW0 696 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 EDC3Q96F86 508 aaKnown RBP9.66□□□□□ -0.86
GPBP1-208ENST00000514387 NEUROD6Q96NK8 337 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 ISCUQ9H1K1 167 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 CCDC134Q9H6E4 229 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 NHEJ1Q9H9Q4 299 aaPredicted RBP9.66□□□□□ -0.86
GPBP1-208ENST00000514387 LUC7LQ9NQ29 371 aaKnown RBP9.66□□□□□ -0.86
GPBP1-208ENST00000514387 DDX21Q9NR30 783 aaKnown RBP eCLIP9.66□□□□□ -0.86
GPBP1-208ENST00000514387 PAPOLBQ9NRJ5 636 aaKnown RBP9.66□□□□□ -0.86
GPBP1-208ENST00000514387 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.66□□□□□ -0.86
GPBP1-208ENST00000514387 CROTQ9UKG9 612 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.66□□□□□ -0.86
GPBP1-208ENST00000514387 ECM29Q5VYK3 1845 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 SLIT3O75094 1523 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 SOS2Q07890 1332 aaPredicted RBP9.66□□□□□ -0.86
GPBP1-208ENST00000514387 LRRD1A4D1F6 860 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 BHMG1C9JSJ3 638 aaPredicted RBP9.66□□□□□ -0.86
GPBP1-208ENST00000514387 P4HA2O15460 535 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 MYBP10242 640 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 ANTXR2P58335 489 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 LRRC23Q53EV4 343 aaPredicted RBP9.66□□□□□ -0.86
GPBP1-208ENST00000514387 ANKRD13DQ6ZTN6 518 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 SLF2Q8IX21 1173 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 LMNTD2Q8IXW0 634 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 EDEM3Q9BZQ6 932 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 TTYH3Q9C0H2 523 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 ZWILCHQ9H900 591 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 PCDH18Q9HCL0 1135 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 MKS1Q9NXB0 559 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 PLAAQ9Y263 795 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 B4DLN1 442 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 RNF225M0QZC1 329 aaPredicted RBP9.66□□□□□ -0.86
GPBP1-208ENST00000514387 M0R2C6 588 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 ZNF185O15231 689 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 SSBP05455 408 aaKnown RBP eCLIP9.66□□□□□ -0.86
GPBP1-208ENST00000514387 IFNAR1P17181 557 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 PTPN12Q05209 780 aaKnown RBP9.66□□□□□ -0.86
GPBP1-208ENST00000514387 TFCP2Q12800 502 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 MAP3K12Q12852 859 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 CNGA3Q16281 694 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 NTRK3Q16288 839 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 CCDC92Q53HC0 331 aaPredicted RBP9.66□□□□□ -0.86
GPBP1-208ENST00000514387 PIGWQ7Z7B1 504 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 ARL10Q8N8L6 244 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 NUP133Q8WUM0 1156 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 RAPGEF5Q92565 580 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 VPS16Q9H269 839 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 ZMAT5Q9UDW3 170 aaKnown RBP9.66□□□□□ -0.86
GPBP1-208ENST00000514387 CTNND2Q9UQB3 1225 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 SPO11Q9Y5K1 396 aa9.66□□□□□ -0.86
GPBP1-208ENST00000514387 FRMD3A2A2Y4 597 aa9.65□□□□□ -0.86
GPBP1-208ENST00000514387 CCT6AP40227 531 aaKnown RBP9.65□□□□□ -0.86
GPBP1-208ENST00000514387 LIFRP42702 1097 aa9.65□□□□□ -0.86
GPBP1-208ENST00000514387 PSMD7P51665 324 aa9.65□□□□□ -0.86
GPBP1-208ENST00000514387 ERMARDQ5T6L9 678 aa9.65□□□□□ -0.86
GPBP1-208ENST00000514387 SH3TC2Q8TF17 1288 aa9.65□□□□□ -0.86
GPBP1-208ENST00000514387 DBNDD2Q9BQY9 259 aa9.65□□□□□ -0.86
GPBP1-208ENST00000514387 TAB2Q9NYJ8 693 aa9.65□□□□□ -0.86
GPBP1-208ENST00000514387 EID1Q9Y6B2 187 aa9.65□□□□□ -0.86
GPBP1-208ENST00000514387 NWD2Q9ULI1 1742 aa9.65□□□□□ -0.86
GPBP1-208ENST00000514387 TRIM64CA6NLI5 447 aa9.65□□□□□ -0.86
GPBP1-208ENST00000514387 H0YGN5 161 aa9.65□□□□□ -0.86
GPBP1-208ENST00000514387 BOLA2-SMG1P6H3BVE0 249 aa9.65□□□□□ -0.86
GPBP1-208ENST00000514387 ZNF213O14771 459 aa9.65□□□□□ -0.86
GPBP1-208ENST00000514387 PEX14O75381 377 aa9.65□□□□□ -0.86
GPBP1-208ENST00000514387 ZNF189O75820 626 aaPredicted RBP9.65□□□□□ -0.86
GPBP1-208ENST00000514387 HEXIM1O94992 359 aaKnown RBP9.65□□□□□ -0.86
GPBP1-208ENST00000514387 PARP1P09874 1014 aaKnown RBP9.65□□□□□ -0.86
GPBP1-208ENST00000514387 NQO1P15559 274 aaKnown RBP9.65□□□□□ -0.86
GPBP1-208ENST00000514387 TCF7P36402 384 aaPredicted RBP9.65□□□□□ -0.86
GPBP1-208ENST00000514387 TOB1P50616 345 aaPredicted RBP9.65□□□□□ -0.86
GPBP1-208ENST00000514387 STX17P56962 302 aa9.65□□□□□ -0.86
GPBP1-208ENST00000514387 C4orf46Q504U0 113 aa9.65□□□□□ -0.86
GPBP1-208ENST00000514387 SMUG1Q53HV7 270 aa9.65□□□□□ -0.86
GPBP1-208ENST00000514387 ZNF570Q96NI8 536 aa9.65□□□□□ -0.86
GPBP1-208ENST00000514387 FAM129AQ9BZQ8 928 aa9.65□□□□□ -0.86
GPBP1-208ENST00000514387 LACRTQ9GZZ8 138 aa9.65□□□□□ -0.86
GPBP1-208ENST00000514387 RPAP3Q9H6T3 665 aaPredicted RBP9.65□□□□□ -0.86
GPBP1-208ENST00000514387 GPBP1L1Q9HC44 474 aaPredicted RBP9.65□□□□□ -0.86
GPBP1-208ENST00000514387 NFS1Q9Y697 457 aa9.65□□□□□ -0.86
GPBP1-208ENST00000514387 FAM25EA8MYX2 175 aa9.64□□□□□ -0.87
GPBP1-208ENST00000514387 ZBTB43O43298 467 aa9.64□□□□□ -0.87
GPBP1-208ENST00000514387 CLASP2O75122 1294 aaKnown RBP9.64□□□□□ -0.87
GPBP1-208ENST00000514387 LINGO3P0C6S8 592 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms