RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 KRT86O43790 486 aa13.92□□□□□ -0.18
SDHA-216ENST00000514027 CACNB3P54284 484 aa13.92□□□□□ -0.18
SDHA-216ENST00000514027 CYP27A1Q02318 531 aa13.92□□□□□ -0.18
SDHA-216ENST00000514027 NFIAQ12857 509 aa13.92□□□□□ -0.18
SDHA-216ENST00000514027 SLC27A3Q5K4L6 730 aa13.92□□□□□ -0.18
SDHA-216ENST00000514027 CENPPQ6IPU0 288 aa13.92□□□□□ -0.18
SDHA-216ENST00000514027 RETREG2Q8NC44 543 aa13.92□□□□□ -0.18
SDHA-216ENST00000514027 MYH4Q9Y623 1939 aa13.92□□□□□ -0.18
SDHA-216ENST00000514027 MACROD2A1Z1Q3 448 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 POTEB2H3BUK9 544 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 ATP1A1P05023 1023 aaKnown RBP13.91□□□□□ -0.18
SDHA-216ENST00000514027 AMPD2Q01433 879 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 TCP10Q12799 353 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 PPP2R5AQ15172 486 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 PPP1R18Q6NYC8 613 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 TMC4Q7Z404 712 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 GLIS3Q8NEA6 775 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 TEKT1Q969V4 418 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 CAPZA3Q96KX2 299 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 MMRN2Q9H8L6 949 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 PSTPIP2Q9H939 334 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 VPS18Q9P253 973 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 PVALEFA0A1B0GWK0 134 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 RCCD1A6NED2 376 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 ANKRD65E5RJM6 399 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 ZBTB5O15062 677 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 SRGAP2O75044 1071 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 MRPL12P52815 198 aaKnown RBP13.91□□□□□ -0.18
SDHA-216ENST00000514027 PDIA5Q14554 519 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 ECM1Q16610 540 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 MAP9Q49MG5 647 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 VWA3BQ502W6 1294 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 ZSCAN29Q8IWY8 852 aaPredicted RBP13.91□□□□□ -0.18
SDHA-216ENST00000514027 NOA1Q8NC60 698 aaKnown RBP13.91□□□□□ -0.18
SDHA-216ENST00000514027 ERGIC2Q96RQ1 377 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 TANGO6Q9C0B7 1094 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 NDST4Q9H3R1 872 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 DBNDD1Q9H9R9 158 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 TRPC5Q9UL62 973 aaPredicted RBP13.91□□□□□ -0.18
SDHA-216ENST00000514027 SUGT1Q9Y2Z0 365 aa13.91□□□□□ -0.18
SDHA-216ENST00000514027 MYH7BA7E2Y1 1941 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 A0A087WUV0 522 aaPredicted RBP13.9□□□□□ -0.18
SDHA-216ENST00000514027 PSMD14O00487 310 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 ERLIN1O75477 346 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 PLEKP08567 350 aaPredicted RBP13.9□□□□□ -0.18
SDHA-216ENST00000514027 SHROOM1Q2M3G4 852 aaPredicted RBP13.9□□□□□ -0.18
SDHA-216ENST00000514027 COBLL1Q53SF7 1204 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 GPATCH4Q5T3I0 446 aaKnown RBP13.9□□□□□ -0.18
SDHA-216ENST00000514027 ZFPM1Q8IX07 1006 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 CCDC42Q96M95 316 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 LACRTQ9GZZ8 138 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 TBC1D7Q9P0N9 293 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 ANKRD31Q8N7Z5 1873 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 KLRG2A4D1S0 409 aaPredicted RBP13.9□□□□□ -0.18
SDHA-216ENST00000514027 USP17L15C9J2P7 530 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 USP17L13C9JLJ4 530 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 USP17L11C9JVI0 530 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 USP17L18D6R9N7 530 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 USP17L22D6RA61 530 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 USP17L17D6RBQ6 530 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 USP17L19D6RCP7 530 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 USP17L20D6RJB6 530 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 EPHB6O15197 1021 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 RBM5P52756 815 aaKnown RBP eCLIP13.9□□□□□ -0.18
SDHA-216ENST00000514027 VSNL1P62760 191 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 USP17L24Q0WX57 530 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 TMEM119Q4V9L6 283 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 PPP4R3AQ6IN85 833 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 USP17L6PQ6QN14 398 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 TRAPPC11Q7Z392 1133 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 KRT26Q7Z3Y9 468 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 C2CD5Q86YS7 1000 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 CCDC170Q8IYT3 715 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 GUF1Q8N442 669 aaKnown RBP13.9□□□□□ -0.18
SDHA-216ENST00000514027 MSANTD4Q8NCY6 345 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 EHBP1Q8NDI1 1231 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 HAS1Q92839 578 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 TSG101Q99816 390 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 TMX4Q9H1E5 349 aaPredicted RBP13.9□□□□□ -0.18
SDHA-216ENST00000514027 PCDHA12Q9UN75 941 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 PCDHAC2Q9Y5I4 1007 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 DUSP10Q9Y6W6 482 aa13.9□□□□□ -0.18
SDHA-216ENST00000514027 GOLGB1Q14789 3259 aaKnown RBP13.89□□□□□ -0.19
SDHA-216ENST00000514027 FGFR1OPO95684 399 aaKnown RBP13.89□□□□□ -0.19
SDHA-216ENST00000514027 CLK2P49760 499 aaKnown RBP13.89□□□□□ -0.19
SDHA-216ENST00000514027 MNAT1P51948 309 aa13.89□□□□□ -0.19
SDHA-216ENST00000514027 COASYQ13057 564 aa13.89□□□□□ -0.19
SDHA-216ENST00000514027 SPA17Q15506 151 aa13.89□□□□□ -0.19
SDHA-216ENST00000514027 MAN2A1Q16706 1144 aa13.89□□□□□ -0.19
SDHA-216ENST00000514027 APOBEC3HQ6NTF7 200 aaKnown RBP13.89□□□□□ -0.19
SDHA-216ENST00000514027 KIAA0825Q8IV33 1275 aa13.89□□□□□ -0.19
SDHA-216ENST00000514027 LRRC27Q9C0I9 530 aa13.89□□□□□ -0.19
SDHA-216ENST00000514027 SUGCTQ9HAC7 445 aa13.89□□□□□ -0.19
SDHA-216ENST00000514027 ABCB6Q9NP58 842 aa13.89□□□□□ -0.19
SDHA-216ENST00000514027 SAR1BQ9Y6B6 198 aa13.89□□□□□ -0.19
SDHA-216ENST00000514027 QSER1Q2KHR3 1735 aa13.89□□□□□ -0.19
SDHA-216ENST00000514027 A0A1W2PQJ5 194 aa13.88□□□□□ -0.19
SDHA-216ENST00000514027 ONECUT3O60422 494 aaPredicted RBP13.88□□□□□ -0.19
SDHA-216ENST00000514027 CRKP46108 304 aa13.88□□□□□ -0.19
SDHA-216ENST00000514027 CACNB1Q02641 598 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms