RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 INPP4AQ96PE3 977 aaPredicted RBP12.89□□□□□ -0.35
HTT-213ENST00000513806 DEFB118Q96PH6 123 aa12.89□□□□□ -0.35
HTT-213ENST00000513806 MPHOSPH6Q99547 160 aaKnown RBP12.89□□□□□ -0.35
HTT-213ENST00000513806 FTOQ9C0B1 505 aaKnown RBP eCLIP12.89□□□□□ -0.35
HTT-213ENST00000513806 JADE2Q9NQC1 790 aa12.89□□□□□ -0.35
HTT-213ENST00000513806 ZDHHC9Q9Y397 364 aa12.89□□□□□ -0.35
HTT-213ENST00000513806 MRVI1Q9Y6F6 885 aa12.89□□□□□ -0.35
HTT-213ENST00000513806 RBM47A0AV96 593 aaKnown RBP12.88□□□□□ -0.35
HTT-213ENST00000513806 B4DLN1 442 aa12.88□□□□□ -0.35
HTT-213ENST00000513806 DDX39AO00148 427 aaKnown RBP12.88□□□□□ -0.35
HTT-213ENST00000513806 PGK1P00558 417 aa12.88□□□□□ -0.35
HTT-213ENST00000513806 TXNP10599 105 aaKnown RBP12.88□□□□□ -0.35
HTT-213ENST00000513806 PDCP20941 246 aa12.88□□□□□ -0.35
HTT-213ENST00000513806 UBA1P22314 1058 aaKnown RBP12.88□□□□□ -0.35
HTT-213ENST00000513806 BEX3Q00994 111 aa12.88□□□□□ -0.35
HTT-213ENST00000513806 SP4Q02446 784 aa12.88□□□□□ -0.35
HTT-213ENST00000513806 MTMR1Q13613 665 aa12.88□□□□□ -0.35
HTT-213ENST00000513806 CEP55Q53EZ4 464 aa12.88□□□□□ -0.35
HTT-213ENST00000513806 LHX8Q68G74 356 aa12.88□□□□□ -0.35
HTT-213ENST00000513806 CCDC62Q6P9F0 684 aa12.88□□□□□ -0.35
HTT-213ENST00000513806 POTEDQ86YR6 584 aa12.88□□□□□ -0.35
HTT-213ENST00000513806 DAXXQ9UER7 740 aaPredicted RBP12.88□□□□□ -0.35
HTT-213ENST00000513806 DDX20Q9UHI6 824 aaKnown RBP12.88□□□□□ -0.35
HTT-213ENST00000513806 DDX41Q9UJV9 622 aaKnown RBP12.88□□□□□ -0.35
HTT-213ENST00000513806 FAM184BQ9ULE4 1060 aa12.88□□□□□ -0.35
HTT-213ENST00000513806 PCDHB6Q9Y5E3 794 aa12.88□□□□□ -0.35
HTT-213ENST00000513806 LOC102724159A0A0B4J2E5 919 aa12.87□□□□□ -0.35
HTT-213ENST00000513806 SPATA31C2B4DYI2 1134 aa12.87□□□□□ -0.35
HTT-213ENST00000513806 MEIS1O00470 390 aa12.87□□□□□ -0.35
HTT-213ENST00000513806 MSH4O15457 936 aa12.87□□□□□ -0.35
HTT-213ENST00000513806 SEPT4O43236 478 aa12.87□□□□□ -0.35
HTT-213ENST00000513806 DYNC1LI2O43237 492 aaPredicted RBP12.87□□□□□ -0.35
HTT-213ENST00000513806 AKR1A1P14550 325 aa12.87□□□□□ -0.35
HTT-213ENST00000513806 CIITAP33076 1130 aa12.87□□□□□ -0.35
HTT-213ENST00000513806 MCM7P33993 719 aa12.87□□□□□ -0.35
HTT-213ENST00000513806 USP11P51784 963 aa12.87□□□□□ -0.35
HTT-213ENST00000513806 ITGB3BPQ13352 177 aaPredicted RBP12.87□□□□□ -0.35
HTT-213ENST00000513806 PWP2Q15269 919 aaKnown RBP12.87□□□□□ -0.35
HTT-213ENST00000513806 TTC38Q5R3I4 469 aa12.87□□□□□ -0.35
HTT-213ENST00000513806 MCTP2Q6DN12 878 aa12.87□□□□□ -0.35
HTT-213ENST00000513806 NLRX1Q86UT6 975 aa12.87□□□□□ -0.35
HTT-213ENST00000513806 OR6J1Q8NGC5 347 aa12.87□□□□□ -0.35
HTT-213ENST00000513806 SCFD2Q8WU76 684 aa12.87□□□□□ -0.35
HTT-213ENST00000513806 PPP1R13LQ8WUF5 828 aa12.87□□□□□ -0.35
HTT-213ENST00000513806 ABHD8Q96I13 439 aa12.87□□□□□ -0.35
HTT-213ENST00000513806 TMEM60Q9H2L4 133 aa12.87□□□□□ -0.35
HTT-213ENST00000513806 AGO4Q9HCK5 861 aaKnown RBP12.87□□□□□ -0.35
HTT-213ENST00000513806 PAK6Q9NQU5 681 aaPredicted RBP12.87□□□□□ -0.35
HTT-213ENST00000513806 KCNH7Q9NS40 1196 aa12.87□□□□□ -0.35
HTT-213ENST00000513806 DDX25Q9UHL0 483 aaKnown RBP12.87□□□□□ -0.35
HTT-213ENST00000513806 GNEQ9Y223 722 aaKnown RBP12.87□□□□□ -0.35
HTT-213ENST00000513806 MYH9P35579 1960 aaKnown RBP12.87□□□□□ -0.35
HTT-213ENST00000513806 SYNRGQ9UMZ2 1314 aa12.87□□□□□ -0.35
HTT-213ENST00000513806 FIBPO43427 364 aa12.86□□□□□ -0.35
HTT-213ENST00000513806 GGPS1O95749 300 aa12.86□□□□□ -0.35
HTT-213ENST00000513806 F13A1P00488 732 aa12.86□□□□□ -0.35
HTT-213ENST00000513806 ZSCAN22P10073 491 aaPredicted RBP12.86□□□□□ -0.35
HTT-213ENST00000513806 KCNA2P16389 499 aa12.86□□□□□ -0.35
HTT-213ENST00000513806 ICAM3P32942 547 aa12.86□□□□□ -0.35
HTT-213ENST00000513806 DDIT3P35638 169 aa12.86□□□□□ -0.35
HTT-213ENST00000513806 ARHGAP1Q07960 439 aa12.86□□□□□ -0.35
HTT-213ENST00000513806 TTLL4Q14679 1199 aa12.86□□□□□ -0.35
HTT-213ENST00000513806 IQSEC1Q6DN90 963 aa12.86□□□□□ -0.35
HTT-213ENST00000513806 XRRA1Q6P2D8 792 aa12.86□□□□□ -0.35
HTT-213ENST00000513806 CYFIP1Q7L576 1253 aa12.86□□□□□ -0.35
HTT-213ENST00000513806 TLK2Q86UE8 772 aa12.86□□□□□ -0.35
HTT-213ENST00000513806 TNS4Q8IZW8 715 aa12.86□□□□□ -0.35
HTT-213ENST00000513806 GPRASP2Q96D09 838 aa12.86□□□□□ -0.35
HTT-213ENST00000513806 TRIP12Q14669 1992 aaPredicted RBP12.85□□□□□ -0.35
HTT-213ENST00000513806 CYP3A7-CYP3A51PA0A087WV96 503 aa12.85□□□□□ -0.35
HTT-213ENST00000513806 CTAGE5O15320 804 aa12.85□□□□□ -0.35
HTT-213ENST00000513806 STAM2O75886 525 aa12.85□□□□□ -0.35
HTT-213ENST00000513806 BRD1O95696 1058 aa12.85□□□□□ -0.35
HTT-213ENST00000513806 RARBP10826 455 aa12.85□□□□□ -0.35
HTT-213ENST00000513806 CYP3A7P24462 503 aa12.85□□□□□ -0.35
HTT-213ENST00000513806 SOX10P56693 466 aa12.85□□□□□ -0.35
HTT-213ENST00000513806 CEBPZQ03701 1054 aaKnown RBP12.85□□□□□ -0.35
HTT-213ENST00000513806 GNPTABQ3T906 1256 aa12.85□□□□□ -0.35
HTT-213ENST00000513806 Q4G0T1 1027 aa12.85□□□□□ -0.35
HTT-213ENST00000513806 DUSP28Q4G0W2 176 aa12.85□□□□□ -0.35
HTT-213ENST00000513806 MYSM1Q5VVJ2 828 aa12.85□□□□□ -0.35
HTT-213ENST00000513806 TEX2Q8IWB9 1127 aa12.85□□□□□ -0.35
HTT-213ENST00000513806 MBOAT7Q96N66 472 aa12.85□□□□□ -0.35
HTT-213ENST00000513806 ZNF577Q9BSK1 485 aa12.85□□□□□ -0.35
HTT-213ENST00000513806 XPNPEP3Q9NQH7 507 aa12.85□□□□□ -0.35
HTT-213ENST00000513806 NRBP1Q9UHY1 535 aa12.85□□□□□ -0.35
HTT-213ENST00000513806 CLIC4Q9Y696 253 aa12.85□□□□□ -0.35
HTT-213ENST00000513806 CCDC85CA6NKD9 419 aa12.84□□□□□ -0.35
HTT-213ENST00000513806 DHX15O43143 795 aaKnown RBP12.84□□□□□ -0.35
HTT-213ENST00000513806 CHMP2AO43633 222 aa12.84□□□□□ -0.35
HTT-213ENST00000513806 ADAMTS4O75173 837 aa12.84□□□□□ -0.35
HTT-213ENST00000513806 GH1P01241 217 aa12.84□□□□□ -0.35
HTT-213ENST00000513806 C6orf222P0C671 652 aaPredicted RBP12.84□□□□□ -0.35
HTT-213ENST00000513806 EN2P19622 333 aaPredicted RBP12.84□□□□□ -0.35
HTT-213ENST00000513806 HSDL1Q3SXM5 330 aa12.84□□□□□ -0.35
HTT-213ENST00000513806 CELF3Q5SZQ8 465 aaKnown RBP12.84□□□□□ -0.35
HTT-213ENST00000513806 PPP4R3AQ6IN85 833 aa12.84□□□□□ -0.35
HTT-213ENST00000513806 DHX37Q8IY37 1157 aaKnown RBP12.84□□□□□ -0.35
HTT-213ENST00000513806 ETNPPLQ8TBG4 499 aa12.84□□□□□ -0.35
HTT-213ENST00000513806 U2AF1L4Q8WU68 220 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms