RNA–Protein interactions for RNA: ENST00000513588.5

CTNND2-215, Transcript of catenin delta 2, humanhuman

TSL 1 (best)

Gene CTNND2, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-215ENST00000513588 NFIXQ14938 502 aa12.64□□□□□ -0.39
CTNND2-215ENST00000513588 PRR16Q569H4 304 aa12.64□□□□□ -0.39
CTNND2-215ENST00000513588 SYCP3Q8IZU3 236 aa12.64□□□□□ -0.39
CTNND2-215ENST00000513588 OTUD6BQ8N6M0 293 aa12.64□□□□□ -0.39
CTNND2-215ENST00000513588 KANSL2Q9H9L4 492 aa12.64□□□□□ -0.39
CTNND2-215ENST00000513588 SERPINB13Q9UIV8 391 aa12.64□□□□□ -0.39
CTNND2-215ENST00000513588 PCDHA1Q9Y5I3 950 aa12.64□□□□□ -0.39
CTNND2-215ENST00000513588 FLOT1O75955 427 aa12.63□□□□□ -0.39
CTNND2-215ENST00000513588 XRCC5P13010 732 aaKnown RBP12.63□□□□□ -0.39
CTNND2-215ENST00000513588 TCP10Q12799 353 aa12.63□□□□□ -0.39
CTNND2-215ENST00000513588 USH1GQ495M9 461 aa12.63□□□□□ -0.39
CTNND2-215ENST00000513588 ARHGEF1Q92888 912 aaKnown RBP12.63□□□□□ -0.39
CTNND2-215ENST00000513588 ZNF219Q9P2Y4 722 aaPredicted RBP12.63□□□□□ -0.39
CTNND2-215ENST00000513588 PLAGL2Q9UPG8 496 aa12.63□□□□□ -0.39
CTNND2-215ENST00000513588 ADAMTS7Q9UKP4 1686 aa12.63□□□□□ -0.39
CTNND2-215ENST00000513588 TRIM66O15016 1216 aa12.63□□□□□ -0.39
CTNND2-215ENST00000513588 SERPING1P05155 500 aa12.63□□□□□ -0.39
CTNND2-215ENST00000513588 SLC10A5Q5PT55 438 aa12.63□□□□□ -0.39
CTNND2-215ENST00000513588 FAM196AQ6ZSG2 479 aa12.63□□□□□ -0.39
CTNND2-215ENST00000513588 TRMT1LQ7Z2T5 733 aaKnown RBP12.63□□□□□ -0.39
CTNND2-215ENST00000513588 DNAJC5Q9H3Z4 198 aa12.63□□□□□ -0.39
CTNND2-215ENST00000513588 SH2D4AQ9H788 454 aa12.63□□□□□ -0.39
CTNND2-215ENST00000513588 SMARCAL1Q9NZC9 954 aa12.63□□□□□ -0.39
CTNND2-215ENST00000513588 PCDHB13Q9Y5F0 798 aa12.63□□□□□ -0.39
CTNND2-215ENST00000513588 FAM170AA1A519 330 aa12.63□□□□□ -0.39
CTNND2-215ENST00000513588 FAM83BQ5T0W9 1011 aa12.63□□□□□ -0.39
CTNND2-215ENST00000513588 GPATCH4Q5T3I0 446 aaKnown RBP12.63□□□□□ -0.39
CTNND2-215ENST00000513588 EMBQ6PCB8 327 aa12.63□□□□□ -0.39
CTNND2-215ENST00000513588 WDR59Q6PJI9 974 aa12.63□□□□□ -0.39
CTNND2-215ENST00000513588 HS2ST1Q7LGA3 356 aa12.63□□□□□ -0.39
CTNND2-215ENST00000513588 ARFGAP2Q8N6H7 521 aa12.63□□□□□ -0.39
CTNND2-215ENST00000513588 CCDC155Q8N6L0 562 aa12.63□□□□□ -0.39
CTNND2-215ENST00000513588 UBLCP1Q8WVY7 318 aaPredicted RBP12.63□□□□□ -0.39
CTNND2-215ENST00000513588 EMILIN3Q9NT22 766 aa12.63□□□□□ -0.39
CTNND2-215ENST00000513588 REXO2Q9Y3B8 237 aaKnown RBP12.63□□□□□ -0.39
CTNND2-215ENST00000513588 PNMA6FA0A0J9YX94 578 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 CALUO43852 315 aaPredicted RBP12.62□□□□□ -0.39
CTNND2-215ENST00000513588 KLRC4O43908 158 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 GCNT3O95395 438 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 PLA2G4BP0C869 781 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 GCFC2P16383 781 aaKnown RBP12.62□□□□□ -0.39
CTNND2-215ENST00000513588 RDXP35241 583 aaKnown RBP12.62□□□□□ -0.39
CTNND2-215ENST00000513588 COASYQ13057 564 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 PABPC4Q13310 644 aaKnown RBP eCLIP12.62□□□□□ -0.39
CTNND2-215ENST00000513588 ORC2Q13416 577 aaPredicted RBP12.62□□□□□ -0.39
CTNND2-215ENST00000513588 GBP6Q6ZN66 633 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 STXBP4Q6ZWJ1 553 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 PEX26Q7Z412 305 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 SRLQ86TD4 932 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 ZNF507Q8TCN5 953 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 CAPN6Q9Y6Q1 641 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 A0A1W2PQJ5 194 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 A6NNZ2 444 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 ADAMTS3O15072 1205 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 TUBB8Q3ZCM7 444 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 CLEC10AQ8IUN9 316 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 C4orf32Q8N8J7 132 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 ZNF384Q8TF68 577 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 NFU1Q9UMS0 254 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 CTDP1Q9Y5B0 961 aaPredicted RBP12.62□□□□□ -0.39
CTNND2-215ENST00000513588 E9PMD0 336 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 PALMO75781 387 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 CYP4A11Q02928 519 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 TMC4Q7Z404 712 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 PROM2Q8N271 834 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 SEMA6BQ9H3T3 888 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 CEP72Q9P209 647 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 RNF14Q9UBS8 474 aa12.62□□□□□ -0.39
CTNND2-215ENST00000513588 GOLGA6L10A0A0M3HER8 536 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 ESYT3A0FGR9 886 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 INPP5BP32019 993 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 AMPD2Q01433 879 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 SEPT2Q15019 361 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 EXOC3L4Q17RC7 722 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 CEP85LQ5SZL2 805 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 PDXDC1Q6P996 788 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 B4GALNT4Q76KP1 1039 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 ZNF142P52746 1687 aaPredicted RBP12.61□□□□□ -0.39
CTNND2-215ENST00000513588 FLT1P17948 1338 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 PKD1L3Q7Z443 1732 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 CHMP2AO43633 222 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 CCDC172P0C7W6 258 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 MNAT1P51948 309 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 CETN1Q12798 172 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 MEA1Q16626 185 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 C16orf86Q6ZW13 317 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 TRIM31Q9BZY9 425 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 CCDC113Q9H0I3 377 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 MEIS1O00470 390 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 LIG3P49916 1009 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 PPP4CP60510 307 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 FIGNQ5HY92 759 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 CENPPQ6IPU0 288 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 RNF10Q8N5U6 811 aaKnown RBP12.61□□□□□ -0.39
CTNND2-215ENST00000513588 KIAA0895Q8NCT3 520 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 LRRC45Q96CN5 670 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 ARHGAP20Q9P2F6 1191 aa12.61□□□□□ -0.39
CTNND2-215ENST00000513588 LOC102724159A0A0B4J2E5 919 aa12.6□□□□□ -0.39
CTNND2-215ENST00000513588 USP17L15C9J2P7 530 aa12.6□□□□□ -0.39
CTNND2-215ENST00000513588 USP17L13C9JLJ4 530 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms