RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 ARIH2O95376 493 aa11.4□□□□□ -0.59
CCL28-203ENST00000513525 TXNP10599 105 aaKnown RBP11.4□□□□□ -0.59
CCL28-203ENST00000513525 CSF2RAP15509 400 aa11.4□□□□□ -0.59
CCL28-203ENST00000513525 DDIT3P35638 169 aa11.4□□□□□ -0.59
CCL28-203ENST00000513525 PSMC6P62333 389 aa11.4□□□□□ -0.59
CCL28-203ENST00000513525 TROAPQ12815 778 aa11.4□□□□□ -0.59
CCL28-203ENST00000513525 TRAF1Q13077 416 aa11.4□□□□□ -0.59
CCL28-203ENST00000513525 WTAPQ15007 396 aa11.4□□□□□ -0.59
CCL28-203ENST00000513525 STXBP2Q15833 593 aa11.4□□□□□ -0.59
CCL28-203ENST00000513525 TMEM240Q5SV17 173 aa11.4□□□□□ -0.59
CCL28-203ENST00000513525 RASIP1Q5U651 963 aa11.4□□□□□ -0.59
CCL28-203ENST00000513525 CCDC62Q6P9F0 684 aa11.4□□□□□ -0.59
CCL28-203ENST00000513525 PSRC1Q6PGN9 363 aaPredicted RBP11.4□□□□□ -0.59
CCL28-203ENST00000513525 C16orf59Q7L2K0 433 aa11.4□□□□□ -0.59
CCL28-203ENST00000513525 MB21D2Q8IYB1 491 aaPredicted RBP11.4□□□□□ -0.59
CCL28-203ENST00000513525 RMDN3Q96TC7 470 aa11.4□□□□□ -0.59
CCL28-203ENST00000513525 MTG1Q9BT17 334 aaPredicted RBP11.4□□□□□ -0.59
CCL28-203ENST00000513525 MTA3Q9BTC8 594 aa11.4□□□□□ -0.59
CCL28-203ENST00000513525 ALDH8A1Q9H2A2 487 aaPredicted RBP11.4□□□□□ -0.59
CCL28-203ENST00000513525 HIPK3Q9H422 1215 aa11.4□□□□□ -0.59
CCL28-203ENST00000513525 ANO2Q9NQ90 1003 aa11.4□□□□□ -0.59
CCL28-203ENST00000513525 RBM8AQ9Y5S9 174 aaKnown RBP11.4□□□□□ -0.59
CCL28-203ENST00000513525 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.39□□□□□ -0.59
CCL28-203ENST00000513525 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.39□□□□□ -0.59
CCL28-203ENST00000513525 PPP1R11O60927 126 aaPredicted RBP11.39□□□□□ -0.59
CCL28-203ENST00000513525 CFBP00751 764 aa11.39□□□□□ -0.59
CCL28-203ENST00000513525 MYL3P08590 195 aa11.39□□□□□ -0.59
CCL28-203ENST00000513525 CYP2C18P33260 490 aa11.39□□□□□ -0.59
CCL28-203ENST00000513525 MCM2P49736 904 aa11.39□□□□□ -0.59
CCL28-203ENST00000513525 ANTXR2P58335 489 aa11.39□□□□□ -0.59
CCL28-203ENST00000513525 SLC35G1Q2M3R5 365 aa11.39□□□□□ -0.59
CCL28-203ENST00000513525 IGDCC4Q8TDY8 1250 aa11.39□□□□□ -0.59
CCL28-203ENST00000513525 COPS5Q92905 334 aa11.39□□□□□ -0.59
CCL28-203ENST00000513525 MAP3K14Q99558 947 aa11.39□□□□□ -0.59
CCL28-203ENST00000513525 NOC4LQ9BVI4 516 aaKnown RBP11.39□□□□□ -0.59
CCL28-203ENST00000513525 SENP2Q9HC62 589 aa11.39□□□□□ -0.59
CCL28-203ENST00000513525 IL23AQ9NPF7 189 aa11.39□□□□□ -0.59
CCL28-203ENST00000513525 PXMP2Q9NR77 195 aa11.39□□□□□ -0.59
CCL28-203ENST00000513525 CYTH3O43739 400 aa11.38□□□□□ -0.59
CCL28-203ENST00000513525 SUPT20HL2P0C7V6 817 aa11.38□□□□□ -0.59
CCL28-203ENST00000513525 PTPN11Q06124 597 aaPredicted RBP11.38□□□□□ -0.59
CCL28-203ENST00000513525 DSG2Q14126 1118 aa11.38□□□□□ -0.59
CCL28-203ENST00000513525 ARHGEF16Q5VV41 709 aa11.38□□□□□ -0.59
CCL28-203ENST00000513525 NFRKBQ6P4R8 1299 aa11.38□□□□□ -0.59
CCL28-203ENST00000513525 ZNF454Q8N9F8 522 aa11.38□□□□□ -0.59
CCL28-203ENST00000513525 LSG1Q9H089 658 aaKnown RBP11.38□□□□□ -0.59
CCL28-203ENST00000513525 TRPV6Q9H1D0 765 aa11.38□□□□□ -0.59
CCL28-203ENST00000513525 TTYH1Q9H313 450 aaPredicted RBP11.38□□□□□ -0.59
CCL28-203ENST00000513525 SEMA6BQ9H3T3 888 aa11.38□□□□□ -0.59
CCL28-203ENST00000513525 PCDHA1Q9Y5I3 950 aa11.38□□□□□ -0.59
CCL28-203ENST00000513525 UMODL1Q5DID0 1318 aa11.38□□□□□ -0.59
CCL28-203ENST00000513525 PRUNE2Q8WUY3 3088 aa11.37□□□□□ -0.59
CCL28-203ENST00000513525 A0A0C4DFX4 3053 aa11.37□□□□□ -0.59
CCL28-203ENST00000513525 PNMA6FA0A0J9YX94 578 aa11.37□□□□□ -0.59
CCL28-203ENST00000513525 EIF3JO75822 258 aaKnown RBP11.37□□□□□ -0.59
CCL28-203ENST00000513525 CD2BP2O95400 341 aaKnown RBP11.37□□□□□ -0.59
CCL28-203ENST00000513525 GH1P01241 217 aa11.37□□□□□ -0.59
CCL28-203ENST00000513525 NR3C2P08235 984 aa11.37□□□□□ -0.59
CCL28-203ENST00000513525 HSPA4P34932 840 aa11.37□□□□□ -0.59
CCL28-203ENST00000513525 ARHGAP1Q07960 439 aa11.37□□□□□ -0.59
CCL28-203ENST00000513525 NBPF20Q3BBV1 942 aa11.37□□□□□ -0.59
CCL28-203ENST00000513525 TMEM67Q5HYA8 995 aa11.37□□□□□ -0.59
CCL28-203ENST00000513525 SEPT14Q6ZU15 432 aa11.37□□□□□ -0.59
CCL28-203ENST00000513525 ZNF365Q70YC5 407 aa11.37□□□□□ -0.59
CCL28-203ENST00000513525 CHST3Q7LGC8 479 aa11.37□□□□□ -0.59
CCL28-203ENST00000513525 CATIPQ7Z7H3 387 aa11.37□□□□□ -0.59
CCL28-203ENST00000513525 SLC17A8Q8NDX2 589 aa11.37□□□□□ -0.59
CCL28-203ENST00000513525 HERVK_113Q902F9 699 aa11.37□□□□□ -0.59
CCL28-203ENST00000513525 WNT2BQ93097 391 aa11.37□□□□□ -0.59
CCL28-203ENST00000513525 EMID1Q96A84 441 aaPredicted RBP11.37□□□□□ -0.59
CCL28-203ENST00000513525 FAM161BQ96MY7 647 aa11.37□□□□□ -0.59
CCL28-203ENST00000513525 PIGSQ96S52 555 aa11.37□□□□□ -0.59
CCL28-203ENST00000513525 PDCD2LQ9BRP1 358 aa11.37□□□□□ -0.59
CCL28-203ENST00000513525 WNT8AQ9H1J5 351 aa11.37□□□□□ -0.59
CCL28-203ENST00000513525 LY9Q9HBG7 655 aa11.37□□□□□ -0.59
CCL28-203ENST00000513525 CHD9Q3L8U1 2897 aa11.37□□□□□ -0.59
CCL28-203ENST00000513525 MICAL3Q7RTP6 2002 aa11.37□□□□□ -0.59
CCL28-203ENST00000513525 DDAH1O94760 285 aa11.36□□□□□ -0.59
CCL28-203ENST00000513525 HSP90AA1P07900 732 aaKnown RBP11.36□□□□□ -0.59
CCL28-203ENST00000513525 MMP3P08254 477 aa11.36□□□□□ -0.59
CCL28-203ENST00000513525 EIF2AK2P19525 551 aaKnown RBP11.36□□□□□ -0.59
CCL28-203ENST00000513525 DNAJB2P25686 324 aa11.36□□□□□ -0.59
CCL28-203ENST00000513525 SMARCA1P28370 1054 aa11.36□□□□□ -0.59
CCL28-203ENST00000513525 LY6KQ17RY6 165 aa11.36□□□□□ -0.59
CCL28-203ENST00000513525 HOMER1Q86YM7 354 aa11.36□□□□□ -0.59
CCL28-203ENST00000513525 ZNF654Q8IZM8 581 aa11.36□□□□□ -0.59
CCL28-203ENST00000513525 CDX2Q99626 313 aaPredicted RBP11.36□□□□□ -0.59
CCL28-203ENST00000513525 MTIF3Q9H2K0 278 aaKnown RBP11.36□□□□□ -0.59
CCL28-203ENST00000513525 TRMT13Q9NUP7 481 aaKnown RBP11.36□□□□□ -0.59
CCL28-203ENST00000513525 DDX41Q9UJV9 622 aaKnown RBP11.36□□□□□ -0.59
CCL28-203ENST00000513525 FGBP02675 491 aa11.35□□□□□ -0.59
CCL28-203ENST00000513525 PFKMP08237 780 aa11.35□□□□□ -0.59
CCL28-203ENST00000513525 ACRP10323 421 aa11.35□□□□□ -0.59
CCL28-203ENST00000513525 MCM5P33992 734 aa11.35□□□□□ -0.59
CCL28-203ENST00000513525 CCL23P55773 120 aa11.35□□□□□ -0.59
CCL28-203ENST00000513525 PGM5Q15124 567 aa11.35□□□□□ -0.59
CCL28-203ENST00000513525 NECTIN1Q15223 517 aa11.35□□□□□ -0.59
CCL28-203ENST00000513525 KCNV1Q6PIU1 500 aa11.35□□□□□ -0.59
CCL28-203ENST00000513525 SESTD1Q86VW0 696 aa11.35□□□□□ -0.59
CCL28-203ENST00000513525 RPUSD2Q8IZ73 545 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms