RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 HMGCS2P54868 508 aa6.02□□□□□ -1.45
HTT-211ENST00000513326 RTP1P59025 263 aa6.02□□□□□ -1.45
HTT-211ENST00000513326 GNAI1P63096 354 aa6.02□□□□□ -1.45
HTT-211ENST00000513326 SPRED3Q2MJR0 410 aa6.02□□□□□ -1.45
HTT-211ENST00000513326 CCDC57Q2TAC2 916 aa6.02□□□□□ -1.45
HTT-211ENST00000513326 TAF7LQ5H9L4 462 aa6.02□□□□□ -1.45
HTT-211ENST00000513326 RPS26P11Q5JNZ5 115 aaPredicted RBP6.02□□□□□ -1.45
HTT-211ENST00000513326 BEND3Q5T5X7 828 aa6.02□□□□□ -1.45
HTT-211ENST00000513326 KANK3Q6NY19 840 aa6.02□□□□□ -1.45
HTT-211ENST00000513326 HHIPL2Q6UWX4 724 aa6.02□□□□□ -1.45
HTT-211ENST00000513326 HS2ST1Q7LGA3 356 aa6.02□□□□□ -1.45
HTT-211ENST00000513326 METTL16Q86W50 562 aaKnown RBP6.02□□□□□ -1.45
HTT-211ENST00000513326 VPS37DQ86XT2 251 aa6.02□□□□□ -1.45
HTT-211ENST00000513326 KLHDC4Q8TBB5 520 aa6.02□□□□□ -1.45
HTT-211ENST00000513326 HOOK2Q96ED9 719 aa6.02□□□□□ -1.45
HTT-211ENST00000513326 SUCLG2Q96I99 432 aa6.02□□□□□ -1.45
HTT-211ENST00000513326 LBHD1Q9BQE6 289 aaPredicted RBP6.02□□□□□ -1.45
HTT-211ENST00000513326 NOC4LQ9BVI4 516 aaKnown RBP6.02□□□□□ -1.45
HTT-211ENST00000513326 ASCC2Q9H1I8 757 aaPredicted RBP6.02□□□□□ -1.45
HTT-211ENST00000513326 PORCNQ9H237 461 aa6.02□□□□□ -1.45
HTT-211ENST00000513326 MYH16Q9H6N6 1097 aa6.02□□□□□ -1.45
HTT-211ENST00000513326 PICK1Q9NRD5 415 aa6.02□□□□□ -1.45
HTT-211ENST00000513326 RLFQ13129 1914 aa6.01□□□□□ -1.45
HTT-211ENST00000513326 PIEZO1Q92508 2521 aa6.01□□□□□ -1.45
HTT-211ENST00000513326 TCF20Q9UGU0 1960 aaKnown RBP6.01□□□□□ -1.45
HTT-211ENST00000513326 TRIM43BA6NCK2 446 aa6.01□□□□□ -1.45
HTT-211ENST00000513326 CAPN2P17655 700 aa6.01□□□□□ -1.45
HTT-211ENST00000513326 ERCC5P28715 1186 aaPredicted RBP6.01□□□□□ -1.45
HTT-211ENST00000513326 JAG1P78504 1218 aa6.01□□□□□ -1.45
HTT-211ENST00000513326 SMAD3P84022 425 aaKnown RBP6.01□□□□□ -1.45
HTT-211ENST00000513326 SPP2Q13103 211 aa6.01□□□□□ -1.45
HTT-211ENST00000513326 ANO1Q5XXA6 986 aa6.01□□□□□ -1.45
HTT-211ENST00000513326 NT5DC4Q86YG4 428 aa6.01□□□□□ -1.45
HTT-211ENST00000513326 GALNT6Q8NCL4 622 aa6.01□□□□□ -1.45
HTT-211ENST00000513326 TRPV1Q8NER1 839 aa6.01□□□□□ -1.45
HTT-211ENST00000513326 TBC1D22AQ8WUA7 517 aa6.01□□□□□ -1.45
HTT-211ENST00000513326 EDARADDQ8WWZ3 215 aa6.01□□□□□ -1.45
HTT-211ENST00000513326 USP6NLQ92738 828 aa6.01□□□□□ -1.45
HTT-211ENST00000513326 TRIM43Q96BQ3 446 aaPredicted RBP6.01□□□□□ -1.45
HTT-211ENST00000513326 STK31Q9BXU1 1019 aa6.01□□□□□ -1.45
HTT-211ENST00000513326 CEP44Q9C0F1 390 aa6.01□□□□□ -1.45
HTT-211ENST00000513326 ADAM19Q9H013 955 aa6.01□□□□□ -1.45
HTT-211ENST00000513326 PRDM5Q9NQX1 630 aaPredicted RBP6.01□□□□□ -1.45
HTT-211ENST00000513326 USP40Q9NVE5 1235 aa6.01□□□□□ -1.45
HTT-211ENST00000513326 ATP11BQ9Y2G3 1177 aa6.01□□□□□ -1.45
HTT-211ENST00000513326 MUC6Q6W4X9 2439 aa6□□□□□ -1.45
HTT-211ENST00000513326 ATAD5Q96QE3 1844 aa6□□□□□ -1.45
HTT-211ENST00000513326 MYH13Q9UKX3 1938 aa6□□□□□ -1.45
HTT-211ENST00000513326 GRM8O00222 908 aa6□□□□□ -1.45
HTT-211ENST00000513326 OIP5O43482 229 aa6□□□□□ -1.45
HTT-211ENST00000513326 FRAT2O75474 233 aaPredicted RBP6□□□□□ -1.45
HTT-211ENST00000513326 ZKSCAN1P17029 563 aaPredicted RBP6□□□□□ -1.45
HTT-211ENST00000513326 MAP3K10Q02779 954 aa6□□□□□ -1.45
HTT-211ENST00000513326 PICALMQ13492 652 aa6□□□□□ -1.45
HTT-211ENST00000513326 ADGRE1Q14246 886 aa6□□□□□ -1.45
HTT-211ENST00000513326 CCDC85BQ15834 202 aaPredicted RBP6□□□□□ -1.45
HTT-211ENST00000513326 TWISTNBQ3B726 338 aaPredicted RBP6□□□□□ -1.45
HTT-211ENST00000513326 TRIM60Q495X7 471 aa6□□□□□ -1.45
HTT-211ENST00000513326 METTL24Q5JXM2 366 aa6□□□□□ -1.45
HTT-211ENST00000513326 C20orf204Q6ZNR8 217 aa6□□□□□ -1.45
HTT-211ENST00000513326 C1orf229Q6ZS94 237 aaPredicted RBP6□□□□□ -1.45
HTT-211ENST00000513326 SV2BQ7L1I2 683 aa6□□□□□ -1.45
HTT-211ENST00000513326 ANKRD44Q8N8A2 993 aa6□□□□□ -1.45
HTT-211ENST00000513326 NUDT8Q8WV74 236 aa6□□□□□ -1.45
HTT-211ENST00000513326 ASB2Q96Q27 587 aa6□□□□□ -1.45
HTT-211ENST00000513326 UHRF1Q96T88 793 aaPredicted RBP6□□□□□ -1.45
HTT-211ENST00000513326 P2RX7Q99572 595 aaKnown RBP6□□□□□ -1.45
HTT-211ENST00000513326 MRIQ9BWK5 157 aa6□□□□□ -1.45
HTT-211ENST00000513326 MUC3BQ9H195 1237 aa6□□□□□ -1.45
HTT-211ENST00000513326 CLEC4MQ9H2X3 399 aaPredicted RBP6□□□□□ -1.45
HTT-211ENST00000513326 ZNF576Q9H609 170 aa6□□□□□ -1.45
HTT-211ENST00000513326 EPHX3Q9H6B9 360 aa6□□□□□ -1.45
HTT-211ENST00000513326 JPH1Q9HDC5 661 aaPredicted RBP6□□□□□ -1.45
HTT-211ENST00000513326 PDLIM7Q9NR12 457 aa6□□□□□ -1.45
HTT-211ENST00000513326 MORF4L1Q9UBU8 362 aa6□□□□□ -1.45
HTT-211ENST00000513326 TRIM33Q9UPN9 1127 aa6□□□□□ -1.45
HTT-211ENST00000513326 STARD13Q9Y3M8 1113 aa6□□□□□ -1.45
HTT-211ENST00000513326 MYO9BQ13459 2157 aa6□□□□□ -1.45
HTT-211ENST00000513326 MAST3O60307 1309 aa5.99□□□□□ -1.45
HTT-211ENST00000513326 SIPA1L1O43166 1804 aa5.99□□□□□ -1.45
HTT-211ENST00000513326 GRXCR1A8MXD5 290 aa5.99□□□□□ -1.45
HTT-211ENST00000513326 CTNND1O60716 968 aaKnown RBP5.99□□□□□ -1.45
HTT-211ENST00000513326 WFS1O76024 890 aa5.99□□□□□ -1.45
HTT-211ENST00000513326 NBPF7P0C2Y1 421 aaPredicted RBP5.99□□□□□ -1.45
HTT-211ENST00000513326 RLBP1P12271 317 aa5.99□□□□□ -1.45
HTT-211ENST00000513326 FGFR2P21802 821 aa5.99□□□□□ -1.45
HTT-211ENST00000513326 GMPRP36959 345 aa5.99□□□□□ -1.45
HTT-211ENST00000513326 GCLCP48506 637 aaPredicted RBP5.99□□□□□ -1.45
HTT-211ENST00000513326 WDR43Q15061 677 aaKnown RBP eCLIP5.99□□□□□ -1.45
HTT-211ENST00000513326 GJC2Q5T442 439 aaPredicted RBP5.99□□□□□ -1.45
HTT-211ENST00000513326 GDF6Q6KF10 455 aaPredicted RBP5.99□□□□□ -1.45
HTT-211ENST00000513326 GPR142Q7Z601 462 aa5.99□□□□□ -1.45
HTT-211ENST00000513326 ZNF384Q8TF68 577 aa5.99□□□□□ -1.45
HTT-211ENST00000513326 RNPC3Q96LT9 517 aaKnown RBP5.99□□□□□ -1.45
HTT-211ENST00000513326 LACRTQ9GZZ8 138 aa5.99□□□□□ -1.45
HTT-211ENST00000513326 PRDM12Q9H4Q4 367 aa5.99□□□□□ -1.45
HTT-211ENST00000513326 BICC1Q9H694 974 aaKnown RBP5.99□□□□□ -1.45
HTT-211ENST00000513326 RBPJLQ9UBG7 517 aa5.99□□□□□ -1.45
HTT-211ENST00000513326 GGT7Q9UJ14 662 aa5.99□□□□□ -1.45
HTT-211ENST00000513326 SOX13Q9UN79 622 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms