RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 FOXP3Q9BZS1 431 aa9.46□□□□□ -0.9
RFC1-214ENST00000512726 MKS1Q9NXB0 559 aa9.46□□□□□ -0.9
RFC1-214ENST00000512726 CLDND1Q9NY35 253 aa9.46□□□□□ -0.9
RFC1-214ENST00000512726 PPARGC1AQ9UBK2 798 aaKnown RBP9.46□□□□□ -0.9
RFC1-214ENST00000512726 FZD9O00144 591 aa9.45□□□□□ -0.9
RFC1-214ENST00000512726 YBX3P16989 372 aaKnown RBP eCLIP9.45□□□□□ -0.9
RFC1-214ENST00000512726 VCAM1P19320 739 aa9.45□□□□□ -0.9
RFC1-214ENST00000512726 BCL6P41182 706 aa9.45□□□□□ -0.9
RFC1-214ENST00000512726 CDKAL1Q5VV42 579 aa9.45□□□□□ -0.9
RFC1-214ENST00000512726 CREB3L3Q68CJ9 461 aa9.45□□□□□ -0.9
RFC1-214ENST00000512726 SLC12A8A0AV02 714 aa9.44□□□□□ -0.9
RFC1-214ENST00000512726 TGM5O43548 720 aa9.44□□□□□ -0.9
RFC1-214ENST00000512726 NPHS1O60500 1241 aa9.44□□□□□ -0.9
RFC1-214ENST00000512726 FKTNO75072 461 aa9.44□□□□□ -0.9
RFC1-214ENST00000512726 KRT37O76014 449 aa9.44□□□□□ -0.9
RFC1-214ENST00000512726 PDE6AP16499 860 aa9.44□□□□□ -0.9
RFC1-214ENST00000512726 ADMP35318 185 aa9.44□□□□□ -0.9
RFC1-214ENST00000512726 PURAQ00577 322 aaKnown RBP9.44□□□□□ -0.9
RFC1-214ENST00000512726 GTF2H3Q13889 308 aa9.44□□□□□ -0.9
RFC1-214ENST00000512726 RASSF3Q86WH2 238 aa9.44□□□□□ -0.9
RFC1-214ENST00000512726 AMOTL1Q8IY63 956 aa9.44□□□□□ -0.9
RFC1-214ENST00000512726 FBXO41Q8TF61 875 aa9.44□□□□□ -0.9
RFC1-214ENST00000512726 CLIP3Q96DZ5 547 aa9.44□□□□□ -0.9
RFC1-214ENST00000512726 RCAN3Q9UKA8 241 aa9.44□□□□□ -0.9
RFC1-214ENST00000512726 CNTNAP5Q8WYK1 1306 aa9.43□□□□□ -0.9
RFC1-214ENST00000512726 C7orf72A4D263 438 aa9.43□□□□□ -0.9
RFC1-214ENST00000512726 H7BY64 318 aa9.43□□□□□ -0.9
RFC1-214ENST00000512726 LDHAP00338 332 aaKnown RBP9.43□□□□□ -0.9
RFC1-214ENST00000512726 LSP1P33241 339 aa9.43□□□□□ -0.9
RFC1-214ENST00000512726 PHC1P78364 1004 aa9.43□□□□□ -0.9
RFC1-214ENST00000512726 GPR19Q15760 415 aa9.43□□□□□ -0.9
RFC1-214ENST00000512726 DUSP27Q5VZP5 1158 aa9.43□□□□□ -0.9
RFC1-214ENST00000512726 TSHZ1Q6ZSZ6 1077 aa9.43□□□□□ -0.9
RFC1-214ENST00000512726 SLC39A13Q96H72 371 aa9.43□□□□□ -0.9
RFC1-214ENST00000512726 CHST12Q9NRB3 414 aa9.43□□□□□ -0.9
RFC1-214ENST00000512726 ZSWIM5Q9P217 1185 aa9.43□□□□□ -0.9
RFC1-214ENST00000512726 NOC2LQ9Y3T9 749 aaKnown RBP9.43□□□□□ -0.9
RFC1-214ENST00000512726 SPO11Q9Y5K1 396 aa9.43□□□□□ -0.9
RFC1-214ENST00000512726 ZNF561-AS1K7EIQ3 104 aa9.42□□□□□ -0.9
RFC1-214ENST00000512726 LTFP02788 710 aa9.42□□□□□ -0.9
RFC1-214ENST00000512726 GNAT1P11488 350 aa9.42□□□□□ -0.9
RFC1-214ENST00000512726 LTKP29376 864 aa9.42□□□□□ -0.9
RFC1-214ENST00000512726 SAFB2Q14151 953 aaKnown RBP eCLIP9.42□□□□□ -0.9
RFC1-214ENST00000512726 TERF2Q15554 542 aa9.42□□□□□ -0.9
RFC1-214ENST00000512726 VPS72Q15906 364 aa9.42□□□□□ -0.9
RFC1-214ENST00000512726 ZNF765Q7L2R6 523 aa9.42□□□□□ -0.9
RFC1-214ENST00000512726 THAP5Q7Z6K1 395 aa9.42□□□□□ -0.9
RFC1-214ENST00000512726 OSTM1Q86WC4 334 aa9.42□□□□□ -0.9
RFC1-214ENST00000512726 SVIPQ8NHG7 77 aa9.42□□□□□ -0.9
RFC1-214ENST00000512726 USP33Q8TEY7 942 aa9.42□□□□□ -0.9
RFC1-214ENST00000512726 HSPBAP1Q96EW2 488 aa9.42□□□□□ -0.9
RFC1-214ENST00000512726 TMEM169Q96HH4 297 aa9.42□□□□□ -0.9
RFC1-214ENST00000512726 NUP88Q99567 741 aaPredicted RBP9.42□□□□□ -0.9
RFC1-214ENST00000512726 CDIP1Q9H305 208 aa9.42□□□□□ -0.9
RFC1-214ENST00000512726 ADGRE2Q9UHX3 823 aa9.42□□□□□ -0.9
RFC1-214ENST00000512726 DUSP13Q9UII6 198 aa9.42□□□□□ -0.9
RFC1-214ENST00000512726 FBXL7Q9UJT9 491 aa9.42□□□□□ -0.9
RFC1-214ENST00000512726 KRT15P19012 456 aa9.41□□□□□ -0.9
RFC1-214ENST00000512726 SCAND1P57086 179 aa9.41□□□□□ -0.9
RFC1-214ENST00000512726 IRF9Q00978 393 aa9.41□□□□□ -0.9
RFC1-214ENST00000512726 SPIRE1Q08AE8 756 aa9.41□□□□□ -0.9
RFC1-214ENST00000512726 LRRC32Q14392 662 aa9.41□□□□□ -0.9
RFC1-214ENST00000512726 GAB4Q2WGN9 574 aa9.41□□□□□ -0.9
RFC1-214ENST00000512726 EP400NLQ6ZTU2 488 aa9.41□□□□□ -0.9
RFC1-214ENST00000512726 CMTR2Q8IYT2 770 aaKnown RBP9.41□□□□□ -0.9
RFC1-214ENST00000512726 KIAA1958Q8N8K9 716 aa9.41□□□□□ -0.9
RFC1-214ENST00000512726 UBE2FQ969M7 185 aa9.41□□□□□ -0.9
RFC1-214ENST00000512726 JAM3Q9BX67 310 aa9.41□□□□□ -0.9
RFC1-214ENST00000512726 PCIF1Q9H4Z3 704 aa9.41□□□□□ -0.9
RFC1-214ENST00000512726 SMURF1Q9HCE7 757 aa9.41□□□□□ -0.9
RFC1-214ENST00000512726 TOMM22Q9NS69 142 aa9.41□□□□□ -0.9
RFC1-214ENST00000512726 ZBTB21Q9ULJ3 1066 aa9.41□□□□□ -0.9
RFC1-214ENST00000512726 KLHL33A6NCF5 533 aa9.4□□□□□ -0.9
RFC1-214ENST00000512726 TRIM75PA6NK02 468 aa9.4□□□□□ -0.9
RFC1-214ENST00000512726 FAM170BA6NMN3 283 aa9.4□□□□□ -0.9
RFC1-214ENST00000512726 GOLGA8AA7E2F4 631 aa9.4□□□□□ -0.9
RFC1-214ENST00000512726 GOLGA8BA8MQT2 603 aa9.4□□□□□ -0.9
RFC1-214ENST00000512726 H3BS24 57 aa9.4□□□□□ -0.9
RFC1-214ENST00000512726 ERC2O15083 957 aa9.4□□□□□ -0.9
RFC1-214ENST00000512726 XPOTO43592 962 aaKnown RBP9.4□□□□□ -0.9
RFC1-214ENST00000512726 CREB3O43889 395 aa9.4□□□□□ -0.9
RFC1-214ENST00000512726 TRIM27P14373 513 aa9.4□□□□□ -0.9
RFC1-214ENST00000512726 SLC9A1P19634 815 aa9.4□□□□□ -0.9
RFC1-214ENST00000512726 JAM2P57087 298 aa9.4□□□□□ -0.9
RFC1-214ENST00000512726 NKPD1Q17RQ9 610 aa9.4□□□□□ -0.9
RFC1-214ENST00000512726 LONRF3Q496Y0 759 aa9.4□□□□□ -0.9
RFC1-214ENST00000512726 GPR158Q5T848 1215 aa9.4□□□□□ -0.9
RFC1-214ENST00000512726 EFCAB2Q5VUJ9 269 aa9.4□□□□□ -0.9
RFC1-214ENST00000512726 HHIPL2Q6UWX4 724 aa9.4□□□□□ -0.9
RFC1-214ENST00000512726 ZNF610Q8N9Z0 462 aa9.4□□□□□ -0.9
RFC1-214ENST00000512726 HSPA12BQ96MM6 686 aa9.4□□□□□ -0.9
RFC1-214ENST00000512726 AIFM3Q96NN9 605 aa9.4□□□□□ -0.9
RFC1-214ENST00000512726 C7orf69Q9H7B7 122 aa9.4□□□□□ -0.9
RFC1-214ENST00000512726 MKNK2Q9HBH9 465 aa9.4□□□□□ -0.9
RFC1-214ENST00000512726 BTG4Q9NY30 223 aa9.4□□□□□ -0.9
RFC1-214ENST00000512726 HMX2A2RU54 273 aa9.39□□□□□ -0.91
RFC1-214ENST00000512726 WTIPA6NIX2 430 aaPredicted RBP9.39□□□□□ -0.91
RFC1-214ENST00000512726 WASH4PA8MWX3 477 aa9.39□□□□□ -0.91
RFC1-214ENST00000512726 HIP1RO75146 1068 aa9.39□□□□□ -0.91
RFC1-214ENST00000512726 IL33O95760 270 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms