RNA–Protein interactions for RNA: ENST00000512648.5

SPOCK3-221, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 1 (best) BASIC

Gene SPOCK3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-221ENST00000512648 CHST13Q8NET6 341 aa27.28■■□□□ 1.96
SPOCK3-221ENST00000512648 CNKSR2Q8WXI2 1034 aa27.28■■□□□ 1.96
SPOCK3-221ENST00000512648 TRIM5Q9C035 493 aa27.28■■□□□ 1.96
SPOCK3-221ENST00000512648 HSD3B7Q9H2F3 369 aa27.28■■□□□ 1.96
SPOCK3-221ENST00000512648 PLCB2Q00722 1185 aa27.27■■□□□ 1.96
SPOCK3-221ENST00000512648 COBLL1Q53SF7 1204 aa27.27■■□□□ 1.96
SPOCK3-221ENST00000512648 TREML2Q5T2D2 321 aa27.27■■□□□ 1.96
SPOCK3-221ENST00000512648 GJA10Q969M2 543 aa27.27■■□□□ 1.96
SPOCK3-221ENST00000512648 OTUD5Q96G74 571 aa27.27■■□□□ 1.96
SPOCK3-221ENST00000512648 WDR11Q9BZH6 1224 aa27.27■■□□□ 1.96
SPOCK3-221ENST00000512648 AGTPBP1Q9UPW5 1226 aa27.27■■□□□ 1.96
SPOCK3-221ENST00000512648 PPP1R2P41236 205 aa27.26■■□□□ 1.95
SPOCK3-221ENST00000512648 B3GNT9Q6UX72 402 aa27.26■■□□□ 1.95
SPOCK3-221ENST00000512648 MOB2Q70IA6 237 aa27.26■■□□□ 1.95
SPOCK3-221ENST00000512648 TAAR1Q96RJ0 339 aa27.26■■□□□ 1.95
SPOCK3-221ENST00000512648 ACAD9Q9H845 621 aa27.26■■□□□ 1.95
SPOCK3-221ENST00000512648 JADE2Q9NQC1 790 aa27.26■■□□□ 1.95
SPOCK3-221ENST00000512648 CLEC11AQ9Y240 323 aa27.26■■□□□ 1.95
SPOCK3-221ENST00000512648 PABPC4Q13310 644 aaKnown RBP eCLIP27.25■■□□□ 1.95
SPOCK3-221ENST00000512648 ECM1Q16610 540 aa27.25■■□□□ 1.95
SPOCK3-221ENST00000512648 KMT5BQ4FZB7 885 aa27.25■■□□□ 1.95
SPOCK3-221ENST00000512648 PDCD2LQ9BRP1 358 aa27.25■■□□□ 1.95
SPOCK3-221ENST00000512648 HOMER2Q9NSB8 354 aa27.25■■□□□ 1.95
SPOCK3-221ENST00000512648 LOC285556D6RIA3 1793 aa27.25■■□□□ 1.95
SPOCK3-221ENST00000512648 ITGB5P18084 799 aa27.25■■□□□ 1.95
SPOCK3-221ENST00000512648 MOGSQ13724 837 aa27.25■■□□□ 1.95
SPOCK3-221ENST00000512648 BAATQ14032 418 aaPredicted RBP27.25■■□□□ 1.95
SPOCK3-221ENST00000512648 PGM5Q15124 567 aa27.25■■□□□ 1.95
SPOCK3-221ENST00000512648 LRCH2Q5VUJ6 765 aa27.25■■□□□ 1.95
SPOCK3-221ENST00000512648 GIMAP8Q8ND71 665 aaPredicted RBP27.25■■□□□ 1.95
SPOCK3-221ENST00000512648 OPTNQ96CV9 577 aa27.25■■□□□ 1.95
SPOCK3-221ENST00000512648 MED15Q96RN5 788 aa27.25■■□□□ 1.95
SPOCK3-221ENST00000512648 PXMP2Q9NR77 195 aa27.25■■□□□ 1.95
SPOCK3-221ENST00000512648 FBXO40Q9UH90 709 aa27.25■■□□□ 1.95
SPOCK3-221ENST00000512648 TPM3P06753 285 aa27.24■■□□□ 1.95
SPOCK3-221ENST00000512648 SPATA31C1P0DKV0 1188 aa27.24■■□□□ 1.95
SPOCK3-221ENST00000512648 CD44P16070 742 aaKnown RBP27.24■■□□□ 1.95
SPOCK3-221ENST00000512648 FMR1Q06787 632 aaKnown RBP eCLIP27.24■■□□□ 1.95
SPOCK3-221ENST00000512648 MCM6Q14566 821 aa27.24■■□□□ 1.95
SPOCK3-221ENST00000512648 SPATA1Q5VX52 437 aa27.24■■□□□ 1.95
SPOCK3-221ENST00000512648 SLC30A10Q6XR72 485 aa27.24■■□□□ 1.95
SPOCK3-221ENST00000512648 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.24■■□□□ 1.95
SPOCK3-221ENST00000512648 KCNK18Q7Z418 384 aa27.24■■□□□ 1.95
SPOCK3-221ENST00000512648 CATSPER3Q86XQ3 398 aa27.24■■□□□ 1.95
SPOCK3-221ENST00000512648 RIOX2Q8IUF8 465 aa27.24■■□□□ 1.95
SPOCK3-221ENST00000512648 RMDN3Q96TC7 470 aa27.24■■□□□ 1.95
SPOCK3-221ENST00000512648 HSD17B14Q9BPX1 270 aa27.24■■□□□ 1.95
SPOCK3-221ENST00000512648 ZNF577Q9BSK1 485 aa27.24■■□□□ 1.95
SPOCK3-221ENST00000512648 TUFT1Q9NNX1 390 aa27.24■■□□□ 1.95
SPOCK3-221ENST00000512648 MYMKA6NI61 221 aa27.23■■□□□ 1.95
SPOCK3-221ENST00000512648 MAFGO15525 162 aa27.23■■□□□ 1.95
SPOCK3-221ENST00000512648 MED24O75448 989 aa27.23■■□□□ 1.95
SPOCK3-221ENST00000512648 ARP10275 920 aa27.23■■□□□ 1.95
SPOCK3-221ENST00000512648 MRPS9P82933 396 aaKnown RBP27.23■■□□□ 1.95
SPOCK3-221ENST00000512648 NSMFQ6X4W1 530 aa27.23■■□□□ 1.95
SPOCK3-221ENST00000512648 GADL1Q6ZQY3 521 aa27.23■■□□□ 1.95
SPOCK3-221ENST00000512648 UNC13DQ70J99 1090 aa27.23■■□□□ 1.95
SPOCK3-221ENST00000512648 RWDD2AQ9UIY3 292 aa27.23■■□□□ 1.95
SPOCK3-221ENST00000512648 KIAA1024Q9UPX6 916 aa27.23■■□□□ 1.95
SPOCK3-221ENST00000512648 ZNF18P17022 549 aa27.22■■□□□ 1.95
SPOCK3-221ENST00000512648 UBXN2AP68543 259 aa27.22■■□□□ 1.95
SPOCK3-221ENST00000512648 NCAPH2Q6IBW4 605 aa27.22■■□□□ 1.95
SPOCK3-221ENST00000512648 POTEEQ6S8J3 1075 aa27.22■■□□□ 1.95
SPOCK3-221ENST00000512648 VSIG10LQ86VR7 867 aa27.22■■□□□ 1.95
SPOCK3-221ENST00000512648 ADSSL1Q8N142 457 aa27.22■■□□□ 1.95
SPOCK3-221ENST00000512648 NSUN6Q8TEA1 469 aaKnown RBP27.22■■□□□ 1.95
SPOCK3-221ENST00000512648 SLC10A4Q96EP9 437 aa27.22■■□□□ 1.95
SPOCK3-221ENST00000512648 CYP39A1Q9NYL5 469 aa27.22■■□□□ 1.95
SPOCK3-221ENST00000512648 PTPRFP10586 1907 aa27.22■■□□□ 1.95
SPOCK3-221ENST00000512648 GOLGA6L6A8MZA4 724 aa27.21■■□□□ 1.95
SPOCK3-221ENST00000512648 IPO5O00410 1097 aaKnown RBP27.21■■□□□ 1.95
SPOCK3-221ENST00000512648 GAS7O60861 476 aa27.21■■□□□ 1.95
SPOCK3-221ENST00000512648 STAM2O75886 525 aa27.21■■□□□ 1.95
SPOCK3-221ENST00000512648 COPB2P35606 906 aa27.21■■□□□ 1.95
SPOCK3-221ENST00000512648 PSMD2Q13200 908 aa27.21■■□□□ 1.95
SPOCK3-221ENST00000512648 EPHA7Q15375 998 aa27.21■■□□□ 1.95
SPOCK3-221ENST00000512648 MAP1SQ66K74 1059 aaPredicted RBP27.21■■□□□ 1.95
SPOCK3-221ENST00000512648 IL31RAQ8NI17 732 aa27.21■■□□□ 1.95
SPOCK3-221ENST00000512648 TEKT3Q9BXF9 490 aa27.21■■□□□ 1.95
SPOCK3-221ENST00000512648 KCNH7Q9NS40 1196 aa27.21■■□□□ 1.95
SPOCK3-221ENST00000512648 BMP2KQ9NSY1 1161 aaPredicted RBP27.21■■□□□ 1.95
SPOCK3-221ENST00000512648 FANCLQ9NW38 375 aa27.21■■□□□ 1.95
SPOCK3-221ENST00000512648 ASIC1P78348 528 aa27.2■■□□□ 1.95
SPOCK3-221ENST00000512648 IRX3P78415 501 aaPredicted RBP27.2■■□□□ 1.95
SPOCK3-221ENST00000512648 SNAPC2Q13487 334 aa27.2■■□□□ 1.95
SPOCK3-221ENST00000512648 ARHGEF16Q5VV41 709 aa27.2■■□□□ 1.95
SPOCK3-221ENST00000512648 NEK9Q8TD19 979 aa27.2■■□□□ 1.95
SPOCK3-221ENST00000512648 EIF2AK1Q9BQI3 630 aaKnown RBP27.2■■□□□ 1.95
SPOCK3-221ENST00000512648 ASCC2Q9H1I8 757 aaPredicted RBP27.2■■□□□ 1.95
SPOCK3-221ENST00000512648 TBC1D22BQ9NU19 505 aa27.2■■□□□ 1.95
SPOCK3-221ENST00000512648 DNM3Q9UQ16 869 aa27.2■■□□□ 1.95
SPOCK3-221ENST00000512648 NFE2L3Q9Y4A8 694 aa27.2■■□□□ 1.95
SPOCK3-221ENST00000512648 RBBP6Q7Z6E9 1792 aaKnown RBP27.2■■□□□ 1.95
SPOCK3-221ENST00000512648 EML1O00423 815 aa27.19■■□□□ 1.94
SPOCK3-221ENST00000512648 PLA2G4BP0C869 781 aa27.19■■□□□ 1.94
SPOCK3-221ENST00000512648 POTEIP0CG38 1075 aa27.19■■□□□ 1.94
SPOCK3-221ENST00000512648 POTEJP0CG39 1038 aa27.19■■□□□ 1.94
SPOCK3-221ENST00000512648 OSBPP22059 807 aa27.19■■□□□ 1.94
SPOCK3-221ENST00000512648 EHHADHQ08426 723 aa27.19■■□□□ 1.94
SPOCK3-221ENST00000512648 DHTKD1Q96HY7 919 aaPredicted RBP27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms