RNA–Protein interactions for RNA: ENST00000512466.1

PDCD6-209, Transcript of programmed cell death 6, humanhuman

TSL 2

Gene PDCD6, Length 3,763 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-209ENST00000512466 TCP10Q12799 353 aa11.74□□□□□ -0.53
PDCD6-209ENST00000512466 E2F5Q15329 346 aa11.74□□□□□ -0.53
PDCD6-209ENST00000512466 TADA2BQ86TJ2 420 aa11.74□□□□□ -0.53
PDCD6-209ENST00000512466 CCDC84Q86UT8 332 aaPredicted RBP11.74□□□□□ -0.53
PDCD6-209ENST00000512466 MSANTD4Q8NCY6 345 aa11.74□□□□□ -0.53
PDCD6-209ENST00000512466 LARP4BQ92615 738 aaKnown RBP11.74□□□□□ -0.53
PDCD6-209ENST00000512466 GEMIN8Q9NWZ8 242 aaKnown RBP11.74□□□□□ -0.53
PDCD6-209ENST00000512466 CLIC2O15247 247 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 CCDC172P0C7W6 258 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 TCP1P17987 556 aaKnown RBP11.73□□□□□ -0.53
PDCD6-209ENST00000512466 ARHGAP44Q17R89 818 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 C3orf67Q6ZVT6 689 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 DEFB132Q7Z7B7 95 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 MGARPQ8TDB4 240 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 CABS1Q96KC9 395 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 STIM2Q9P246 746 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 CNTNAP5Q8WYK1 1306 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 SEMA3EO15041 775 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 PAK2Q13177 524 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 ASIC2Q16515 512 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 VWA3BQ502W6 1294 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 MUM1L1Q5H9M0 696 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 NT5DC1Q5TFE4 455 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 PDXDC2PQ6P474 469 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 MMS22LQ6ZRQ5 1243 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 TRAPPC11Q7Z392 1133 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 TXNRD3Q86VQ6 643 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 MYOCDQ8IZQ8 938 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 VGLL2Q8N8G2 317 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 TMEM47Q9BQJ4 181 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 TRIM9Q9C026 710 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.73□□□□□ -0.53
PDCD6-209ENST00000512466 CEP83Q9Y592 693 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 KCPQ6ZWJ8 1503 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 NPHP3-ACAD11A0A0J9YXS1 232 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 LRCH2Q5VUJ6 765 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 MICALCLQ6ZW33 695 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 KCTD1Q719H9 257 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 KRT25Q7Z3Z0 450 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 U2AF1L4Q8WU68 220 aaKnown RBP11.73□□□□□ -0.53
PDCD6-209ENST00000512466 DDX12PQ92771 950 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 DHTKD1Q96HY7 919 aaPredicted RBP11.73□□□□□ -0.53
PDCD6-209ENST00000512466 THAP9Q9H5L6 903 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 RGS17Q9UGC6 210 aaPredicted RBP11.73□□□□□ -0.53
PDCD6-209ENST00000512466 SUFUQ9UMX1 484 aa11.73□□□□□ -0.53
PDCD6-209ENST00000512466 SERPINB2P05120 415 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 IFNAR2P48551 515 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 TNNC1P63316 161 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 ADAM9Q13443 819 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 PNMA8AQ86V59 439 aaPredicted RBP11.72□□□□□ -0.53
PDCD6-209ENST00000512466 VPS36Q86VN1 386 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 GPBP1Q86WP2 473 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 GLIS3Q8NEA6 775 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 RPGRIP1Q96KN7 1286 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 PLA2G12BQ9BX93 195 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 ARPP21Q9UBL0 812 aaPredicted RBP11.72□□□□□ -0.53
PDCD6-209ENST00000512466 PCDHA6Q9UN73 950 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 PCDHA8Q9Y5H6 950 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 KDM3BQ7LBC6 1761 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 EPHB6O15197 1021 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 UFL1O94874 794 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 TRAPPC10P48553 1259 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 ACTN3Q08043 901 aaPredicted RBP11.72□□□□□ -0.53
PDCD6-209ENST00000512466 PABPC4Q13310 644 aaKnown RBP eCLIP11.72□□□□□ -0.531e-7■■□□□ 12.2
PDCD6-209ENST00000512466 PEX26Q7Z412 305 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 HNRNPLLQ8WVV9 542 aaKnown RBP11.72□□□□□ -0.53
PDCD6-209ENST00000512466 SHISA4Q96DD7 197 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 MRRFQ96E11 262 aaKnown RBP11.72□□□□□ -0.53
PDCD6-209ENST00000512466 PAIP2Q9BPZ3 127 aaKnown RBP11.72□□□□□ -0.53
PDCD6-209ENST00000512466 PANK4Q9NVE7 773 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 SNX12Q9UMY4 172 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 PCDHA12Q9UN75 941 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 GCOM1H8Y6P7 765 aaPredicted RBP11.72□□□□□ -0.53
PDCD6-209ENST00000512466 KRIT1O00522 736 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 NKRFO15226 690 aaKnown RBP eCLIP11.72□□□□□ -0.53
PDCD6-209ENST00000512466 LDHCP07864 332 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 MYZAPP0CAP1 466 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 FAM26FQ5R3K3 315 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 WDR59Q6PJI9 974 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 DDX47Q9H0S4 455 aaKnown RBP11.72□□□□□ -0.53
PDCD6-209ENST00000512466 ZBTB21Q9ULJ3 1066 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 CDHR2Q9BYE9 1310 aa11.72□□□□□ -0.53
PDCD6-209ENST00000512466 A0A087WUV0 522 aaPredicted RBP11.71□□□□□ -0.53
PDCD6-209ENST00000512466 FAM196BA6NMK8 535 aa11.71□□□□□ -0.53
PDCD6-209ENST00000512466 USP17L5A8MUK1 530 aa11.71□□□□□ -0.53
PDCD6-209ENST00000512466 E9PMD0 336 aa11.71□□□□□ -0.53
PDCD6-209ENST00000512466 MYO1FO00160 1098 aa11.71□□□□□ -0.53
PDCD6-209ENST00000512466 VIMP08670 466 aaKnown RBP11.71□□□□□ -0.53
PDCD6-209ENST00000512466 RPSAP08865 295 aaKnown RBP11.71□□□□□ -0.53
PDCD6-209ENST00000512466 GLI3P10071 1580 aa11.71□□□□□ -0.53
PDCD6-209ENST00000512466 FGFR2P21802 821 aa11.71□□□□□ -0.53
PDCD6-209ENST00000512466 SLCO1A2P46721 670 aa11.71□□□□□ -0.53
PDCD6-209ENST00000512466 SCNN1DP51172 638 aa11.71□□□□□ -0.53
PDCD6-209ENST00000512466 UBE4AQ14139 1066 aa11.71□□□□□ -0.53
PDCD6-209ENST00000512466 NFIXQ14938 502 aa11.71□□□□□ -0.53
PDCD6-209ENST00000512466 NRAPQ86VF7 1730 aa11.71□□□□□ -0.53
PDCD6-209ENST00000512466 NSUN4Q96CB9 384 aaKnown RBP11.71□□□□□ -0.53
PDCD6-209ENST00000512466 RAB21Q9UL25 225 aa11.71□□□□□ -0.53
PDCD6-209ENST00000512466 CACNA1FO60840 1977 aa11.71□□□□□ -0.53
PDCD6-209ENST00000512466 ZNF804BA4D1E1 1349 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms