RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 ADKP55263 362 aaKnown RBP14.36□□□□□ -0.11
HMGB2-205ENST00000511316 CUL4BQ13620 913 aa14.36□□□□□ -0.11
HMGB2-205ENST00000511316 Q3C1V9 767 aa14.36□□□□□ -0.11
HMGB2-205ENST00000511316 IQCEQ6IPM2 695 aa14.36□□□□□ -0.11
HMGB2-205ENST00000511316 WDR93Q6P2C0 686 aa14.36□□□□□ -0.11
HMGB2-205ENST00000511316 OTOP1Q7RTM1 612 aa14.36□□□□□ -0.11
HMGB2-205ENST00000511316 CCDC148Q8NFR7 591 aa14.36□□□□□ -0.11
HMGB2-205ENST00000511316 FAM71BQ8TC56 605 aa14.36□□□□□ -0.11
HMGB2-205ENST00000511316 VCPKMTQ9H867 229 aa14.36□□□□□ -0.11
HMGB2-205ENST00000511316 RWDD2AQ9UIY3 292 aa14.36□□□□□ -0.11
HMGB2-205ENST00000511316 PPP1R2P41236 205 aa14.36□□□□□ -0.11
HMGB2-205ENST00000511316 ZSCAN26Q16670 478 aa14.36□□□□□ -0.11
HMGB2-205ENST00000511316 TSR1Q2NL82 804 aaKnown RBP14.36□□□□□ -0.11
HMGB2-205ENST00000511316 CTU1Q7Z7A3 348 aaKnown RBP14.36□□□□□ -0.11
HMGB2-205ENST00000511316 ZNF444Q8N0Y2 327 aaPredicted RBP14.36□□□□□ -0.11
HMGB2-205ENST00000511316 GOLGA6L1Q8N7Z2 621 aa14.36□□□□□ -0.11
HMGB2-205ENST00000511316 RLFQ13129 1914 aa14.35□□□□□ -0.11
HMGB2-205ENST00000511316 POLR3GO15318 223 aaPredicted RBP14.35□□□□□ -0.11
HMGB2-205ENST00000511316 PRPF3O43395 683 aaKnown RBP14.35□□□□□ -0.11
HMGB2-205ENST00000511316 CNMDO75829 334 aa14.35□□□□□ -0.11
HMGB2-205ENST00000511316 ACTN2P35609 894 aa14.35□□□□□ -0.11
HMGB2-205ENST00000511316 USP14P54578 494 aa14.35□□□□□ -0.11
HMGB2-205ENST00000511316 CKAP4Q07065 602 aaKnown RBP14.35□□□□□ -0.11
HMGB2-205ENST00000511316 RAB11FIP4Q86YS3 637 aa14.35□□□□□ -0.11
HMGB2-205ENST00000511316 ANKRD13CQ8N6S4 541 aa14.35□□□□□ -0.11
HMGB2-205ENST00000511316 NOC3LQ8WTT2 800 aaKnown RBP14.35□□□□□ -0.11
HMGB2-205ENST00000511316 TRIM47Q96LD4 638 aa14.35□□□□□ -0.11
HMGB2-205ENST00000511316 HAUS4Q9H6D7 363 aa14.35□□□□□ -0.11
HMGB2-205ENST00000511316 TMOD4Q9NZQ9 345 aa14.35□□□□□ -0.11
HMGB2-205ENST00000511316 ZSWIM8A7E2V4 1837 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 MYH8P13535 1937 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 FANCGO15287 622 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 SASH3O75995 380 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 HERVK_113P62684 666 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 IRX5P78411 483 aaPredicted RBP14.34□□□□□ -0.11
HMGB2-205ENST00000511316 BEND6Q5SZJ8 279 aaPredicted RBP14.34□□□□□ -0.11
HMGB2-205ENST00000511316 RCSD1Q6JBY9 416 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 ZNF654Q8IZM8 581 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 TNS4Q8IZW8 715 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 SPICE1Q8N0Z3 855 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 FAM107BQ9H098 131 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 CSRNP2Q9H175 543 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 ZNF287Q9HBT7 754 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 ST7Q9NRC1 585 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 ADAM21Q9UKJ8 722 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 TARSL2A2RTX5 802 aaKnown RBP14.34□□□□□ -0.11
HMGB2-205ENST00000511316 USP17L15C9J2P7 530 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 USP17L13C9JLJ4 530 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 USP17L11C9JVI0 530 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 USP17L18D6R9N7 530 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 USP17L22D6RA61 530 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 USP17L17D6RBQ6 530 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 USP17L19D6RCP7 530 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 USP17L20D6RJB6 530 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 DDAH1O94760 285 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 SEC31AO94979 1220 aaKnown RBP14.34□□□□□ -0.11
HMGB2-205ENST00000511316 RBL2Q08999 1139 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 USP17L24Q0WX57 530 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 DPYDQ12882 1025 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 ARL6IP4Q66PJ3 421 aaKnown RBP14.34□□□□□ -0.11
HMGB2-205ENST00000511316 LBX2Q6XYB7 198 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 APTXQ7Z2E3 356 aaKnown RBP14.34□□□□□ -0.11
HMGB2-205ENST00000511316 LPAR1Q92633 364 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 PAGE5Q96GU1 130 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 RPAP3Q9H6T3 665 aaPredicted RBP14.34□□□□□ -0.11
HMGB2-205ENST00000511316 SAMSN1Q9NSI8 373 aaKnown RBP14.34□□□□□ -0.11
HMGB2-205ENST00000511316 MORF4L1Q9UBU8 362 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 ADAMTS5Q9UNA0 930 aa14.34□□□□□ -0.11
HMGB2-205ENST00000511316 A0A1W2PQC6 194 aa14.33□□□□□ -0.12
HMGB2-205ENST00000511316 F5H6K3 240 aa14.33□□□□□ -0.12
HMGB2-205ENST00000511316 GTPBP6O43824 516 aaPredicted RBP14.33□□□□□ -0.12
HMGB2-205ENST00000511316 KRT83P78385 493 aa14.33□□□□□ -0.12
HMGB2-205ENST00000511316 KLRC3Q07444 240 aa14.33□□□□□ -0.12
HMGB2-205ENST00000511316 FAM110CQ1W6H9 321 aa14.33□□□□□ -0.12
HMGB2-205ENST00000511316 ZNF569Q5MCW4 686 aa14.33□□□□□ -0.12
HMGB2-205ENST00000511316 CCDC70Q6NSX1 233 aa14.33□□□□□ -0.12
HMGB2-205ENST00000511316 CATIPQ7Z7H3 387 aa14.33□□□□□ -0.12
HMGB2-205ENST00000511316 RETREG2Q8NC44 543 aa14.33□□□□□ -0.12
HMGB2-205ENST00000511316 PHF20Q9BVI0 1012 aa14.33□□□□□ -0.12
HMGB2-205ENST00000511316 MRPL44Q9H9J2 332 aaKnown RBP14.33□□□□□ -0.12
HMGB2-205ENST00000511316 ARHGEF10LQ9HCE6 1279 aa14.33□□□□□ -0.12
HMGB2-205ENST00000511316 TCP11L1Q9NUJ3 509 aa14.33□□□□□ -0.12
HMGB2-205ENST00000511316 ZNHIT6Q9NWK9 470 aaKnown RBP14.33□□□□□ -0.12
HMGB2-205ENST00000511316 PNMA3Q9UL41 463 aa14.33□□□□□ -0.12
HMGB2-205ENST00000511316 L1RE1Q9UN81 338 aa14.33□□□□□ -0.12
HMGB2-205ENST00000511316 PCDHB6Q9Y5E3 794 aa14.33□□□□□ -0.12
HMGB2-205ENST00000511316 DOCK3Q8IZD9 2030 aa14.33□□□□□ -0.12
HMGB2-205ENST00000511316 SPDYE16A6NNV3 312 aaPredicted RBP14.32□□□□□ -0.12
HMGB2-205ENST00000511316 A6NNZ2 444 aa14.32□□□□□ -0.12
HMGB2-205ENST00000511316 PRR29P0C7W0 189 aa14.32□□□□□ -0.12
HMGB2-205ENST00000511316 TSPY3P0CV98 308 aa14.32□□□□□ -0.12
HMGB2-205ENST00000511316 TSPY8P0CW00 308 aa14.32□□□□□ -0.12
HMGB2-205ENST00000511316 RXRAP19793 462 aa14.32□□□□□ -0.12
HMGB2-205ENST00000511316 OSBPP22059 807 aa14.32□□□□□ -0.12
HMGB2-205ENST00000511316 PSMC4P43686 418 aa14.32□□□□□ -0.12
HMGB2-205ENST00000511316 GCLCP48506 637 aaPredicted RBP14.32□□□□□ -0.12
HMGB2-205ENST00000511316 RAD51AP2Q09MP3 1159 aa14.32□□□□□ -0.12
HMGB2-205ENST00000511316 PABPC4Q13310 644 aaKnown RBP eCLIP14.32□□□□□ -0.123e-50■■□□□ 14.2
HMGB2-205ENST00000511316 STIM1Q13586 685 aa14.32□□□□□ -0.12
HMGB2-205ENST00000511316 TUBB8Q3ZCM7 444 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms