RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 MYH7BA7E2Y1 1941 aa17.82■□□□□ 0.44
SH3TC1-220ENST00000511002 A0A1W2PPC1 479 aa17.81■□□□□ 0.44
SH3TC1-220ENST00000511002 SMCO2A6NFE2 343 aa17.81■□□□□ 0.44
SH3TC1-220ENST00000511002 MEIS2O14770 477 aa17.81■□□□□ 0.44
SH3TC1-220ENST00000511002 KIAA0355O15063 1070 aa17.81■□□□□ 0.44
SH3TC1-220ENST00000511002 FOSBP53539 338 aa17.81■□□□□ 0.44
SH3TC1-220ENST00000511002 CUL4AQ13619 759 aa17.81■□□□□ 0.44
SH3TC1-220ENST00000511002 TTLL4Q14679 1199 aa17.81■□□□□ 0.44
SH3TC1-220ENST00000511002 HSCBQ8IWL3 235 aa17.81■□□□□ 0.44
SH3TC1-220ENST00000511002 FAM126BQ8IXS8 530 aa17.81■□□□□ 0.44
SH3TC1-220ENST00000511002 SLC43A3Q8NBI5 491 aa17.81■□□□□ 0.44
SH3TC1-220ENST00000511002 CUL5Q93034 780 aa17.81■□□□□ 0.44
SH3TC1-220ENST00000511002 LBHD1Q9BQE6 289 aaPredicted RBP17.81■□□□□ 0.44
SH3TC1-220ENST00000511002 RIC8AQ9NPQ8 531 aa17.81■□□□□ 0.44
SH3TC1-220ENST00000511002 TBX21Q9UL17 535 aa17.81■□□□□ 0.44
SH3TC1-220ENST00000511002 ESYT2A0FGR8 921 aa17.8■□□□□ 0.44
SH3TC1-220ENST00000511002 B4DLN1 442 aa17.8■□□□□ 0.44
SH3TC1-220ENST00000511002 PIK3CDO00329 1044 aa17.8■□□□□ 0.44
SH3TC1-220ENST00000511002 MYL3P08590 195 aa17.8■□□□□ 0.44
SH3TC1-220ENST00000511002 MRPL12P52815 198 aaKnown RBP17.8■□□□□ 0.44
SH3TC1-220ENST00000511002 EPHB4P54760 987 aa17.8■□□□□ 0.44
SH3TC1-220ENST00000511002 PURAQ00577 322 aaKnown RBP17.8■□□□□ 0.44
SH3TC1-220ENST00000511002 ARHGAP1Q07960 439 aa17.8■□□□□ 0.44
SH3TC1-220ENST00000511002 ITGA7Q13683 1181 aa17.8■□□□□ 0.44
SH3TC1-220ENST00000511002 TDHQ8IZJ6 230 aa17.8■□□□□ 0.44
SH3TC1-220ENST00000511002 CCDC148Q8NFR7 591 aa17.8■□□□□ 0.44
SH3TC1-220ENST00000511002 CCDC12Q8WUD4 166 aaPredicted RBP17.8■□□□□ 0.44
SH3TC1-220ENST00000511002 WASF1Q92558 559 aa17.8■□□□□ 0.44
SH3TC1-220ENST00000511002 TOX2Q96NM4 488 aa17.8■□□□□ 0.44
SH3TC1-220ENST00000511002 ZMYND12Q9H0C1 365 aa17.8■□□□□ 0.44
SH3TC1-220ENST00000511002 SH3GLB2Q9NR46 395 aa17.8■□□□□ 0.44
SH3TC1-220ENST00000511002 TMEM39AQ9NV64 488 aa17.8■□□□□ 0.44
SH3TC1-220ENST00000511002 MAP3K20Q9NYL2 800 aaKnown RBP17.8■□□□□ 0.44
SH3TC1-220ENST00000511002 KCNJ14Q9UNX9 436 aa17.8■□□□□ 0.44
SH3TC1-220ENST00000511002 FRMPD4Q14CM0 1322 aa17.79■□□□□ 0.44
SH3TC1-220ENST00000511002 DCDC2CA8MYV0 355 aa17.79■□□□□ 0.44
SH3TC1-220ENST00000511002 NKRFO15226 690 aaKnown RBP eCLIP17.79■□□□□ 0.443e-6■■■■□ 22.4
SH3TC1-220ENST00000511002 ZEB2O60315 1214 aa17.79■□□□□ 0.44
SH3TC1-220ENST00000511002 SORBS3O60504 671 aa17.79■□□□□ 0.44
SH3TC1-220ENST00000511002 HMGN5P82970 282 aaKnown RBP17.79■□□□□ 0.44
SH3TC1-220ENST00000511002 C9orf50Q5SZB4 431 aa17.79■□□□□ 0.44
SH3TC1-220ENST00000511002 VSIG10LQ86VR7 867 aa17.79■□□□□ 0.44
SH3TC1-220ENST00000511002 SAMD3Q8N6K7 520 aa17.79■□□□□ 0.44
SH3TC1-220ENST00000511002 AFG1LQ8WV93 481 aa17.79■□□□□ 0.44
SH3TC1-220ENST00000511002 DDX41Q9UJV9 622 aaKnown RBP17.79■□□□□ 0.44
SH3TC1-220ENST00000511002 DOCK5Q9H7D0 1870 aa17.79■□□□□ 0.44
SH3TC1-220ENST00000511002 A6NJR5 290 aa17.78■□□□□ 0.44
SH3TC1-220ENST00000511002 EIF3JO75822 258 aaKnown RBP17.78■□□□□ 0.44
SH3TC1-220ENST00000511002 CABYRO75952 493 aa17.78■□□□□ 0.44
SH3TC1-220ENST00000511002 CD4P01730 458 aa17.78■□□□□ 0.44
SH3TC1-220ENST00000511002 NLRP5P59047 1200 aa17.78■□□□□ 0.44
SH3TC1-220ENST00000511002 MRPS9P82933 396 aaKnown RBP17.78■□□□□ 0.44
SH3TC1-220ENST00000511002 NPY5RQ15761 445 aa17.78■□□□□ 0.44
SH3TC1-220ENST00000511002 BCAS3Q9H6U6 928 aa17.78■□□□□ 0.44
SH3TC1-220ENST00000511002 C6orf50Q9HD87 102 aa17.78■□□□□ 0.44
SH3TC1-220ENST00000511002 TMEM260Q9NX78 707 aa17.78■□□□□ 0.44
SH3TC1-220ENST00000511002 B4GALT4O60513 344 aa17.77■□□□□ 0.44
SH3TC1-220ENST00000511002 GH1P01241 217 aa17.77■□□□□ 0.44
SH3TC1-220ENST00000511002 RAG1P15918 1043 aa17.77■□□□□ 0.44
SH3TC1-220ENST00000511002 GJB2P29033 226 aa17.77■□□□□ 0.44
SH3TC1-220ENST00000511002 CLK2P49760 499 aaKnown RBP17.77■□□□□ 0.44
SH3TC1-220ENST00000511002 CPT1AP50416 773 aa17.77■□□□□ 0.44
SH3TC1-220ENST00000511002 SP2Q02086 613 aa17.77■□□□□ 0.44
SH3TC1-220ENST00000511002 SHHQ15465 462 aa17.77■□□□□ 0.44
SH3TC1-220ENST00000511002 FAM184AQ8NB25 1140 aa17.77■□□□□ 0.44
SH3TC1-220ENST00000511002 RASGRP4Q8TDF6 673 aa17.77■□□□□ 0.44
SH3TC1-220ENST00000511002 PGBD1Q96JS3 809 aa17.77■□□□□ 0.44
SH3TC1-220ENST00000511002 PHF20Q9BVI0 1012 aa17.77■□□□□ 0.44
SH3TC1-220ENST00000511002 PPP1R12CQ9BZL4 782 aa17.77■□□□□ 0.44
SH3TC1-220ENST00000511002 TRPV6Q9H1D0 765 aa17.77■□□□□ 0.44
SH3TC1-220ENST00000511002 FOXD4L1Q9NU39 408 aa17.77■□□□□ 0.44
SH3TC1-220ENST00000511002 POLR3EQ9NVU0 708 aa17.77■□□□□ 0.44
SH3TC1-220ENST00000511002 SMC3Q9UQE7 1217 aa17.77■□□□□ 0.44
SH3TC1-220ENST00000511002 MRVI1Q9Y6F6 885 aa17.77■□□□□ 0.44
SH3TC1-220ENST00000511002 SZT2Q5T011 3432 aa17.77■□□□□ 0.43
SH3TC1-220ENST00000511002 UMODL1Q5DID0 1318 aa17.76■□□□□ 0.43
SH3TC1-220ENST00000511002 MROH7Q68CQ1 1323 aa17.76■□□□□ 0.43
SH3TC1-220ENST00000511002 MMP3P08254 477 aa17.76■□□□□ 0.43
SH3TC1-220ENST00000511002 GNA11P29992 359 aa17.76■□□□□ 0.43
SH3TC1-220ENST00000511002 CCND2P30279 289 aa17.76■□□□□ 0.43
SH3TC1-220ENST00000511002 GUCY1B3Q02153 619 aa17.76■□□□□ 0.43
SH3TC1-220ENST00000511002 SEMA3FQ13275 785 aa17.76■□□□□ 0.43
SH3TC1-220ENST00000511002 JAKMIP3Q5VZ66 844 aa17.76■□□□□ 0.43
SH3TC1-220ENST00000511002 REXO1Q8N1G1 1221 aaKnown RBP17.76■□□□□ 0.43
SH3TC1-220ENST00000511002 MTG1Q9BT17 334 aaPredicted RBP17.76■□□□□ 0.43
SH3TC1-220ENST00000511002 GLT8D2Q9H1C3 349 aa17.76■□□□□ 0.43
SH3TC1-220ENST00000511002 PCDHA4Q9UN74 947 aa17.76■□□□□ 0.43
SH3TC1-220ENST00000511002 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.76■□□□□ 0.43
SH3TC1-220ENST00000511002 RBAK-RBAKDNI3L0D1 243 aa17.75■□□□□ 0.43
SH3TC1-220ENST00000511002 XBP1P17861 261 aa17.75■□□□□ 0.43
SH3TC1-220ENST00000511002 UBA1P22314 1058 aaKnown RBP17.75■□□□□ 0.43
SH3TC1-220ENST00000511002 NBPF20Q3BBV1 942 aa17.75■□□□□ 0.43
SH3TC1-220ENST00000511002 KRT40Q6A162 431 aa17.75■□□□□ 0.43
SH3TC1-220ENST00000511002 FAM177A1Q8N128 213 aaPredicted RBP17.75■□□□□ 0.43
SH3TC1-220ENST00000511002 DAGLBQ8NCG7 672 aa17.75■□□□□ 0.43
SH3TC1-220ENST00000511002 C8orf76Q96K31 380 aa17.75■□□□□ 0.43
SH3TC1-220ENST00000511002 TRMT13Q9NUP7 481 aaKnown RBP17.75■□□□□ 0.43
SH3TC1-220ENST00000511002 RTEL1Q9NZ71 1219 aa17.75■□□□□ 0.43
SH3TC1-220ENST00000511002 PCDHA6Q9UN73 950 aa17.75■□□□□ 0.43
SH3TC1-220ENST00000511002 PCDHA8Q9Y5H6 950 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms