RNA–Protein interactions for RNA: ENST00000510281.1

TRIO-215, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-215ENST00000510281 PITPNM1O00562 1244 aa23.2■■□□□ 1.3
TRIO-215ENST00000510281 CA3P07451 260 aa23.2■■□□□ 1.3
TRIO-215ENST00000510281 MYL3P08590 195 aa23.2■■□□□ 1.3
TRIO-215ENST00000510281 ACTN1P12814 892 aa23.2■■□□□ 1.3
TRIO-215ENST00000510281 HSPA4P34932 840 aa23.2■■□□□ 1.3
TRIO-215ENST00000510281 CACNB1Q02641 598 aaPredicted RBP23.2■■□□□ 1.3
TRIO-215ENST00000510281 ARHGEF16Q5VV41 709 aa23.2■■□□□ 1.3
TRIO-215ENST00000510281 NFRKBQ6P4R8 1299 aa23.2■■□□□ 1.3
TRIO-215ENST00000510281 OR6J1Q8NGC5 347 aa23.2■■□□□ 1.3
TRIO-215ENST00000510281 KCNB2Q92953 911 aa23.2■■□□□ 1.3
TRIO-215ENST00000510281 MAF1Q9H063 256 aa23.2■■□□□ 1.3
TRIO-215ENST00000510281 PXMP2Q9NR77 195 aa23.2■■□□□ 1.3
TRIO-215ENST00000510281 NKRFO15226 690 aaKnown RBP eCLIP23.19■■□□□ 1.3
TRIO-215ENST00000510281 TFF2Q03403 129 aa23.19■■□□□ 1.3
TRIO-215ENST00000510281 KRT32Q14532 448 aa23.19■■□□□ 1.3
TRIO-215ENST00000510281 PPP2R5BQ15173 497 aa23.19■■□□□ 1.3
TRIO-215ENST00000510281 DEFB128Q7Z7B8 93 aa23.19■■□□□ 1.3
TRIO-215ENST00000510281 MICALL1Q8N3F8 863 aa23.19■■□□□ 1.3
TRIO-215ENST00000510281 NECAB3Q96P71 396 aaPredicted RBP23.19■■□□□ 1.3
TRIO-215ENST00000510281 BRPF3Q9ULD4 1205 aa23.19■■□□□ 1.3
TRIO-215ENST00000510281 SNX14Q9Y5W7 946 aa23.19■■□□□ 1.3
TRIO-215ENST00000510281 SCN10AQ9Y5Y9 1956 aa23.18■■□□□ 1.3
TRIO-215ENST00000510281 hCG_1642624A0A1W2PR95 340 aa23.18■■□□□ 1.3
TRIO-215ENST00000510281 A6NJR5 290 aa23.18■■□□□ 1.3
TRIO-215ENST00000510281 GTPBP6O43824 516 aaPredicted RBP23.18■■□□□ 1.3
TRIO-215ENST00000510281 KPNA6O60684 536 aa23.18■■□□□ 1.3
TRIO-215ENST00000510281 CALM1P0DP23 149 aa23.18■■□□□ 1.3
TRIO-215ENST00000510281 CALM2P0DP24 149 aa23.18■■□□□ 1.3
TRIO-215ENST00000510281 CALM3P0DP25 149 aa23.18■■□□□ 1.3
TRIO-215ENST00000510281 PTPN11Q06124 597 aaPredicted RBP23.18■■□□□ 1.3
TRIO-215ENST00000510281 NBPF20Q3BBV1 942 aa23.18■■□□□ 1.3
TRIO-215ENST00000510281 BRDTQ58F21 947 aaPredicted RBP23.18■■□□□ 1.3
TRIO-215ENST00000510281 APOA5Q6Q788 366 aa23.18■■□□□ 1.3
TRIO-215ENST00000510281 SEPT14Q6ZU15 432 aa23.18■■□□□ 1.3
TRIO-215ENST00000510281 TMTC3Q6ZXV5 915 aa23.18■■□□□ 1.3
TRIO-215ENST00000510281 CCDC82Q8N4S0 544 aa23.18■■□□□ 1.3
TRIO-215ENST00000510281 SCFD2Q8WU76 684 aa23.18■■□□□ 1.3
TRIO-215ENST00000510281 RRP36Q96EU6 259 aaKnown RBP23.18■■□□□ 1.3
TRIO-215ENST00000510281 JAKMIP1Q96N16 626 aaKnown RBP23.18■■□□□ 1.3
TRIO-215ENST00000510281 B4DLN1 442 aa23.17■■□□□ 1.3
TRIO-215ENST00000510281 GCOM1H8Y6P7 765 aaPredicted RBP23.17■■□□□ 1.3
TRIO-215ENST00000510281 IQCF3P0C7M6 154 aa23.17■■□□□ 1.3
TRIO-215ENST00000510281 POLR2MP0CAP2 368 aa23.17■■□□□ 1.3
TRIO-215ENST00000510281 PLA2G5P39877 138 aa23.17■■□□□ 1.3
TRIO-215ENST00000510281 GNAQP50148 359 aa23.17■■□□□ 1.3
TRIO-215ENST00000510281 MRPL12P52815 198 aaKnown RBP23.17■■□□□ 1.3
TRIO-215ENST00000510281 IL31RAQ8NI17 732 aa23.17■■□□□ 1.3
TRIO-215ENST00000510281 IWS1Q96ST2 819 aa23.17■■□□□ 1.3
TRIO-215ENST00000510281 LZTS2Q9BRK4 669 aa23.17■■□□□ 1.3
TRIO-215ENST00000510281 C1QTNF1Q9BXJ1 281 aa23.17■■□□□ 1.3
TRIO-215ENST00000510281 EPOPA6NHQ4 379 aa23.16■■□□□ 1.3
TRIO-215ENST00000510281 RFXAPO00287 272 aa23.16■■□□□ 1.3
TRIO-215ENST00000510281 REC8O95072 547 aa23.16■■□□□ 1.3
TRIO-215ENST00000510281 NR3C2P08235 984 aa23.16■■□□□ 1.3
TRIO-215ENST00000510281 TXNP10599 105 aaKnown RBP23.16■■□□□ 1.3
TRIO-215ENST00000510281 SMARCA1P28370 1054 aa23.16■■□□□ 1.3
TRIO-215ENST00000510281 C1QBPQ07021 282 aaKnown RBP23.16■■□□□ 1.3
TRIO-215ENST00000510281 FCHSD1Q86WN1 690 aa23.16■■□□□ 1.3
TRIO-215ENST00000510281 FANCBQ8NB91 859 aa23.16■■□□□ 1.3
TRIO-215ENST00000510281 PDCD2LQ9BRP1 358 aa23.16■■□□□ 1.3
TRIO-215ENST00000510281 SEC63Q9UGP8 760 aaKnown RBP23.16■■□□□ 1.3
TRIO-215ENST00000510281 COG5Q9UP83 839 aa23.16■■□□□ 1.3
TRIO-215ENST00000510281 PRRC2BQ5JSZ5 2229 aaKnown RBP23.16■■□□□ 1.3
TRIO-215ENST00000510281 KCNQ1P51787 676 aa23.15■■□□□ 1.3
TRIO-215ENST00000510281 TAP1Q03518 808 aa23.15■■□□□ 1.3
TRIO-215ENST00000510281 TRAF1Q13077 416 aa23.15■■□□□ 1.3
TRIO-215ENST00000510281 BFSP2Q13515 415 aa23.15■■□□□ 1.3
TRIO-215ENST00000510281 STXBP2Q15833 593 aa23.15■■□□□ 1.3
TRIO-215ENST00000510281 FAM47CQ5HY64 1035 aa23.15■■□□□ 1.3
TRIO-215ENST00000510281 CCDC62Q6P9F0 684 aa23.15■■□□□ 1.3
TRIO-215ENST00000510281 HERC6Q8IVU3 1022 aa23.15■■□□□ 1.3
TRIO-215ENST00000510281 RETREG2Q8NC44 543 aa23.15■■□□□ 1.3
TRIO-215ENST00000510281 ZFP91Q96JP5 570 aaPredicted RBP23.15■■□□□ 1.3
TRIO-215ENST00000510281 CNTNAP5Q8WYK1 1306 aa23.14■■□□□ 1.3
TRIO-215ENST00000510281 KLF18A0A0U1RQI7 1052 aa23.14■■□□□ 1.29
TRIO-215ENST00000510281 BAIAP3O94812 1187 aa23.14■■□□□ 1.29
TRIO-215ENST00000510281 ARHGEF15O94989 841 aa23.14■■□□□ 1.29
TRIO-215ENST00000510281 MYCLP12524 364 aaPredicted RBP23.14■■□□□ 1.29
TRIO-215ENST00000510281 PGM5Q15124 567 aa23.14■■□□□ 1.29
TRIO-215ENST00000510281 SKIV2LQ15477 1246 aaKnown RBP23.14■■□□□ 1.29
TRIO-215ENST00000510281 LY6KQ17RY6 165 aa23.14■■□□□ 1.29
TRIO-215ENST00000510281 SYNE3Q6ZMZ3 975 aa23.14■■□□□ 1.29
TRIO-215ENST00000510281 TBC1D32Q96NH3 1257 aa23.14■■□□□ 1.29
TRIO-215ENST00000510281 CERS4Q9HA82 394 aa23.14■■□□□ 1.29
TRIO-215ENST00000510281 MAP3K20Q9NYL2 800 aaKnown RBP23.14■■□□□ 1.29
TRIO-215ENST00000510281 KIF28PB7ZC32 967 aa23.13■■□□□ 1.29
TRIO-215ENST00000510281 ZBTB43O43298 467 aa23.13■■□□□ 1.29
TRIO-215ENST00000510281 HMGB1P09429 215 aaKnown RBP23.13■■□□□ 1.29
TRIO-215ENST00000510281 RTN1Q16799 776 aa23.13■■□□□ 1.29
TRIO-215ENST00000510281 Q6ZUG5 572 aa23.13■■□□□ 1.29
TRIO-215ENST00000510281 SCN5AQ14524 2016 aa23.13■■□□□ 1.29
TRIO-215ENST00000510281 GOLGA8AA7E2F4 631 aa23.12■■□□□ 1.29
TRIO-215ENST00000510281 GOLGA8BA8MQT2 603 aa23.12■■□□□ 1.29
TRIO-215ENST00000510281 EIF3JO75822 258 aaKnown RBP23.12■■□□□ 1.29
TRIO-215ENST00000510281 RGS20O76081 388 aa23.12■■□□□ 1.29
TRIO-215ENST00000510281 USP17L6PQ6QN14 398 aa23.12■■□□□ 1.29
TRIO-215ENST00000510281 BLOC1S2Q6QNY1 142 aa23.12■■□□□ 1.29
TRIO-215ENST00000510281 SAMD3Q8N6K7 520 aa23.12■■□□□ 1.29
TRIO-215ENST00000510281 PPP1R13LQ8WUF5 828 aa23.12■■□□□ 1.29
TRIO-215ENST00000510281 ARNTL2Q8WYA1 636 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms