RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 PPP1R9AQ9ULJ8 1098 aa5.67□□□□□ -1.5
PHF3-210ENST00000509876 SYNPO2Q9UMS6 1093 aa5.67□□□□□ -1.5
PHF3-210ENST00000509876 MYPNQ86TC9 1320 aa5.67□□□□□ -1.5
PHF3-210ENST00000509876 SYNRGQ9UMZ2 1314 aa5.67□□□□□ -1.5
PHF3-210ENST00000509876 HNRNPDLO14979 420 aaKnown RBP5.67□□□□□ -1.5
PHF3-210ENST00000509876 STRNO43815 780 aa5.67□□□□□ -1.5
PHF3-210ENST00000509876 KPNA6O60684 536 aa5.67□□□□□ -1.5
PHF3-210ENST00000509876 OAZ1P54368 228 aa5.67□□□□□ -1.5
PHF3-210ENST00000509876 TSGA10IPQ3SY00 556 aa5.67□□□□□ -1.5
PHF3-210ENST00000509876 TMC6Q7Z403 805 aa5.67□□□□□ -1.5
PHF3-210ENST00000509876 C2orf40Q9H1Z8 148 aa5.67□□□□□ -1.5
PHF3-210ENST00000509876 RGPD1P0DJD0 1748 aa5.67□□□□□ -1.5
PHF3-210ENST00000509876 GTPBP6O43824 516 aaPredicted RBP5.67□□□□□ -1.5
PHF3-210ENST00000509876 KIF23Q02241 960 aaPredicted RBP5.67□□□□□ -1.5
PHF3-210ENST00000509876 SURF1Q15526 300 aa5.67□□□□□ -1.5
PHF3-210ENST00000509876 ARL6IP4Q66PJ3 421 aaKnown RBP5.67□□□□□ -1.5
PHF3-210ENST00000509876 MLKLQ8NB16 471 aa5.67□□□□□ -1.5
PHF3-210ENST00000509876 POMGNT1Q8WZA1 660 aa5.67□□□□□ -1.5
PHF3-210ENST00000509876 RNF34Q969K3 372 aa5.67□□□□□ -1.5
PHF3-210ENST00000509876 GLT1D1Q96MS3 346 aa5.67□□□□□ -1.5
PHF3-210ENST00000509876 PLVAPQ9BX97 442 aa5.67□□□□□ -1.5
PHF3-210ENST00000509876 CPVLQ9H3G5 476 aa5.67□□□□□ -1.5
PHF3-210ENST00000509876 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.67□□□□□ -1.5
PHF3-210ENST00000509876 C4BP0C0L5 1744 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 RIC1Q4ADV7 1423 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 DCDC2CA8MYV0 355 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 MAFGO15525 162 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 HOXC6P09630 235 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 PSMC5P62195 406 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 UVSSAQ2YD98 709 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 AOPEPQ8N6M6 819 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 BLZF1Q9H2G9 400 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 SERTAD1Q9UHV2 236 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 P4HBP07237 508 aaKnown RBP5.66□□□□□ -1.5
PHF3-210ENST00000509876 ZBTB48P10074 688 aaPredicted RBP5.66□□□□□ -1.5
PHF3-210ENST00000509876 CYLC1P35663 651 aaPredicted RBP5.66□□□□□ -1.5
PHF3-210ENST00000509876 CYP2J2P51589 502 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 SP3Q02447 781 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 RAPGEF1Q13905 1077 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 CTTNQ14247 550 aaKnown RBP5.66□□□□□ -1.5
PHF3-210ENST00000509876 KMT5BQ4FZB7 885 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 MICAL1Q8TDZ2 1067 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 DPF3Q92784 378 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 CCDC94Q9BW85 323 aaPredicted RBP5.66□□□□□ -1.5
PHF3-210ENST00000509876 ACBD3Q9H3P7 528 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 GRPEL1Q9HAV7 217 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 DISC1Q9NRI5 854 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 CA12O43570 354 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 AKR1B10O60218 316 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 BCRP11274 1271 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 PTPRAP18433 802 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 LIN9Q5TKA1 542 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 SWSAP1Q6NVH7 229 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 STAG2Q8N3U4 1231 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 PPP2R3CQ969Q6 453 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 NLRP4Q96MN2 994 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 KIF5CO60282 957 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 GGPS1O95749 300 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 RPLP2P05387 115 aaKnown RBP5.66□□□□□ -1.5
PHF3-210ENST00000509876 MYL1P05976 194 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 NR3C2P08235 984 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 GLI3P10071 1580 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 PSMC4P43686 418 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 PPFIA1Q13136 1202 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 SLFN12LQ6IEE8 588 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 CLEC10AQ8IUN9 316 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 MTMR14Q8NCE2 650 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 ACER1Q8TDN7 264 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 NELFBQ8WX92 580 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 CAPNS2Q96L46 248 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 PPP1R16BQ96T49 567 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 CLSTN2Q9H4D0 955 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 GABBR1Q9UBS5 961 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 C10orf71Q711Q0 1435 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 NPM3O75607 178 aaKnown RBP5.66□□□□□ -1.5
PHF3-210ENST00000509876 SRGAP2CP0DJJ0 459 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 NOP2P46087 812 aaKnown RBP5.66□□□□□ -1.5
PHF3-210ENST00000509876 TNNC1P63316 161 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 ANKRD23Q86SG2 305 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 MMS19Q96T76 1030 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 SPATC1LQ9H0A9 340 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 ASCC2Q9H1I8 757 aaPredicted RBP5.66□□□□□ -1.5
PHF3-210ENST00000509876 NMRK2Q9NPI5 230 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 ARGLU1Q9NWB6 273 aaPredicted RBP5.66□□□□□ -1.5
PHF3-210ENST00000509876 PCDHA10Q9Y5I2 948 aa5.66□□□□□ -1.5
PHF3-210ENST00000509876 FZD9O00144 591 aa5.65□□□□□ -1.5
PHF3-210ENST00000509876 IPO5O00410 1097 aaKnown RBP5.65□□□□□ -1.5
PHF3-210ENST00000509876 CMA1P23946 247 aa5.65□□□□□ -1.5
PHF3-210ENST00000509876 IER5Q5VY09 327 aa5.65□□□□□ -1.5
PHF3-210ENST00000509876 EHBP1Q8NDI1 1231 aa5.65□□□□□ -1.5
PHF3-210ENST00000509876 ERCC4Q92889 916 aaPredicted RBP5.65□□□□□ -1.5
PHF3-210ENST00000509876 AGBL1Q96MI9 1066 aa5.65□□□□□ -1.5
PHF3-210ENST00000509876 TMEM260Q9NX78 707 aa5.65□□□□□ -1.5
PHF3-210ENST00000509876 RGPD5Q99666 1765 aa5.65□□□□□ -1.5
PHF3-210ENST00000509876 NFKBIEO00221 500 aa5.65□□□□□ -1.5
PHF3-210ENST00000509876 PFKFB1P16118 471 aa5.65□□□□□ -1.5
PHF3-210ENST00000509876 QARSP47897 775 aaKnown RBP5.65□□□□□ -1.5
PHF3-210ENST00000509876 ZNF280AP59817 542 aaPredicted RBP5.65□□□□□ -1.5
PHF3-210ENST00000509876 MYL5Q02045 173 aa5.65□□□□□ -1.5
PHF3-210ENST00000509876 NFX1Q12986 1120 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms