RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 TMEM132EQ6IEE7 984 aa9.95□□□□□ -0.82
TRAPPC11-206ENST00000509857 LDHDQ86WU2 507 aa9.95□□□□□ -0.82
TRAPPC11-206ENST00000509857 SYNPOQ8N3V7 929 aa9.95□□□□□ -0.82
TRAPPC11-206ENST00000509857 SLC7A14Q8TBB6 771 aa9.95□□□□□ -0.82
TRAPPC11-206ENST00000509857 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.95□□□□□ -0.82
TRAPPC11-206ENST00000509857 KCNN1Q92952 543 aa9.95□□□□□ -0.82
TRAPPC11-206ENST00000509857 NDOR1Q9UHB4 597 aa9.95□□□□□ -0.82
TRAPPC11-206ENST00000509857 ZNF652Q9Y2D9 606 aa9.95□□□□□ -0.82
TRAPPC11-206ENST00000509857 SIT1Q9Y3P8 196 aa9.95□□□□□ -0.82
TRAPPC11-206ENST00000509857 PCDHA5Q9Y5H7 936 aa9.95□□□□□ -0.82
TRAPPC11-206ENST00000509857 CLIP1P30622 1438 aa9.95□□□□□ -0.82
TRAPPC11-206ENST00000509857 RAPGEF2Q9Y4G8 1499 aa9.95□□□□□ -0.82
TRAPPC11-206ENST00000509857 SOD2P04179 222 aa9.94□□□□□ -0.82
TRAPPC11-206ENST00000509857 ZNF200P98182 395 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC11-206ENST00000509857 HABP4Q5JVS0 413 aaKnown RBP9.94□□□□□ -0.82
TRAPPC11-206ENST00000509857 MZB1Q8WU39 189 aa9.94□□□□□ -0.82
TRAPPC11-206ENST00000509857 SGPP1Q9BX95 441 aa9.94□□□□□ -0.82
TRAPPC11-206ENST00000509857 RNF38Q9H0F5 515 aa9.94□□□□□ -0.82
TRAPPC11-206ENST00000509857 CD320Q9NPF0 282 aa9.94□□□□□ -0.82
TRAPPC11-206ENST00000509857 VPS8Q8N3P4 1428 aa9.93□□□□□ -0.82
TRAPPC11-206ENST00000509857 FAM47E-STBD1D6RA91 191 aa9.93□□□□□ -0.82
TRAPPC11-206ENST00000509857 N4BP3O15049 544 aa9.93□□□□□ -0.82
TRAPPC11-206ENST00000509857 C8AP07357 584 aa9.93□□□□□ -0.82
TRAPPC11-206ENST00000509857 TMEM253P0C7T8 217 aa9.93□□□□□ -0.82
TRAPPC11-206ENST00000509857 PAK1Q13153 545 aa9.93□□□□□ -0.82
TRAPPC11-206ENST00000509857 FNDC3BQ53EP0 1204 aaKnown RBP9.93□□□□□ -0.82
TRAPPC11-206ENST00000509857 CYP4F22Q6NT55 531 aa9.93□□□□□ -0.82
TRAPPC11-206ENST00000509857 MTDHQ86UE4 582 aaKnown RBP9.93□□□□□ -0.82
TRAPPC11-206ENST00000509857 HOMER1Q86YM7 354 aa9.93□□□□□ -0.82
TRAPPC11-206ENST00000509857 JAM3Q9BX67 310 aa9.93□□□□□ -0.82
TRAPPC11-206ENST00000509857 TRIM39Q9HCM9 518 aa9.93□□□□□ -0.82
TRAPPC11-206ENST00000509857 PALD1Q9ULE6 856 aa9.93□□□□□ -0.82
TRAPPC11-206ENST00000509857 PLA2G2DQ9UNK4 145 aa9.93□□□□□ -0.82
TRAPPC11-206ENST00000509857 PDS5BQ9NTI5 1447 aa9.92□□□□□ -0.82
TRAPPC11-206ENST00000509857 IRS4O14654 1257 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC11-206ENST00000509857 HGSO14964 777 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC11-206ENST00000509857 TADA3O75528 432 aa9.92□□□□□ -0.82
TRAPPC11-206ENST00000509857 CRTAMO95727 393 aa9.92□□□□□ -0.82
TRAPPC11-206ENST00000509857 EPHB3P54753 998 aa9.92□□□□□ -0.82
TRAPPC11-206ENST00000509857 GUCY1A3Q02108 690 aa9.92□□□□□ -0.82
TRAPPC11-206ENST00000509857 STEAP3Q658P3 488 aa9.92□□□□□ -0.82
TRAPPC11-206ENST00000509857 OTOP3Q7RTS5 596 aa9.92□□□□□ -0.82
TRAPPC11-206ENST00000509857 IGDCC3Q8IVU1 814 aa9.92□□□□□ -0.82
TRAPPC11-206ENST00000509857 PCDH19Q8TAB3 1148 aa9.92□□□□□ -0.82
TRAPPC11-206ENST00000509857 APPBP2Q92624 585 aa9.92□□□□□ -0.82
TRAPPC11-206ENST00000509857 IPPKQ9H8X2 491 aa9.92□□□□□ -0.82
TRAPPC11-206ENST00000509857 PCDHA8Q9Y5H6 950 aa9.92□□□□□ -0.82
TRAPPC11-206ENST00000509857 ABCA10Q8WWZ4 1543 aa9.92□□□□□ -0.82
TRAPPC11-206ENST00000509857 FGD5Q6ZNL6 1462 aa9.91□□□□□ -0.82
TRAPPC11-206ENST00000509857 NFIBO00712 420 aa9.91□□□□□ -0.82
TRAPPC11-206ENST00000509857 C1QTNF9P0C862 333 aa9.91□□□□□ -0.82
TRAPPC11-206ENST00000509857 IGFBP6P24592 240 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC11-206ENST00000509857 TARBP2Q15633 366 aaKnown RBP9.91□□□□□ -0.82
TRAPPC11-206ENST00000509857 BRAPQ7Z569 592 aa9.91□□□□□ -0.82
TRAPPC11-206ENST00000509857 MIB1Q86YT6 1006 aa9.91□□□□□ -0.82
TRAPPC11-206ENST00000509857 PHOSPHO1Q8TCT1 267 aa9.91□□□□□ -0.82
TRAPPC11-206ENST00000509857 CPA5Q8WXQ8 436 aa9.91□□□□□ -0.82
TRAPPC11-206ENST00000509857 ALG3Q92685 438 aa9.91□□□□□ -0.82
TRAPPC11-206ENST00000509857 SCLYQ96I15 445 aa9.91□□□□□ -0.82
TRAPPC11-206ENST00000509857 SLC6A20Q9NP91 592 aa9.91□□□□□ -0.82
TRAPPC11-206ENST00000509857 FANCLQ9NW38 375 aa9.91□□□□□ -0.82
TRAPPC11-206ENST00000509857 PCDHA9Q9Y5H5 950 aa9.91□□□□□ -0.82
TRAPPC11-206ENST00000509857 ENPP3O14638 875 aa9.9□□□□□ -0.82
TRAPPC11-206ENST00000509857 PPP1R12AO14974 1030 aaPredicted RBP9.9□□□□□ -0.82
TRAPPC11-206ENST00000509857 RFPL3O75679 317 aa9.9□□□□□ -0.82
TRAPPC11-206ENST00000509857 RAPGEF3O95398 923 aa9.9□□□□□ -0.82
TRAPPC11-206ENST00000509857 ASGR2P07307 311 aa9.9□□□□□ -0.82
TRAPPC11-206ENST00000509857 PMLP29590 882 aa9.9□□□□□ -0.82
TRAPPC11-206ENST00000509857 PKN1Q16512 942 aa9.9□□□□□ -0.82
TRAPPC11-206ENST00000509857 GIMAP6Q6P9H5 292 aa9.9□□□□□ -0.82
TRAPPC11-206ENST00000509857 ATG14Q6ZNE5 492 aa9.9□□□□□ -0.82
TRAPPC11-206ENST00000509857 C16orf86Q6ZW13 317 aa9.9□□□□□ -0.82
TRAPPC11-206ENST00000509857 PIP4K2CQ8TBX8 421 aa9.9□□□□□ -0.82
TRAPPC11-206ENST00000509857 TOPBP1Q92547 1522 aa9.89□□□□□ -0.83
TRAPPC11-206ENST00000509857 MAFKO60675 156 aa9.89□□□□□ -0.83
TRAPPC11-206ENST00000509857 RASGRP1O95267 797 aa9.89□□□□□ -0.83
TRAPPC11-206ENST00000509857 ASMTLO95671 621 aa9.89□□□□□ -0.83
TRAPPC11-206ENST00000509857 SPIRE1Q08AE8 756 aa9.89□□□□□ -0.83
TRAPPC11-206ENST00000509857 TCEA2Q15560 299 aa9.89□□□□□ -0.83
TRAPPC11-206ENST00000509857 AMIGO3Q86WK7 504 aa9.89□□□□□ -0.83
TRAPPC11-206ENST00000509857 MAGEB10Q96LZ2 347 aaPredicted RBP9.89□□□□□ -0.83
TRAPPC11-206ENST00000509857 CLUHP3Q96NS8 147 aa9.89□□□□□ -0.83
TRAPPC11-206ENST00000509857 SMOC1Q9H4F8 434 aa9.89□□□□□ -0.83
TRAPPC11-206ENST00000509857 BCAS3Q9H6U6 928 aa9.89□□□□□ -0.83
TRAPPC11-206ENST00000509857 CUX2O14529 1486 aa9.89□□□□□ -0.83
TRAPPC11-206ENST00000509857 TCRBV5S2A0A599 114 aa9.88□□□□□ -0.83
TRAPPC11-206ENST00000509857 TLDC2A0PJX2 215 aa9.88□□□□□ -0.83
TRAPPC11-206ENST00000509857 TCAF2A6NFQ2 919 aa9.88□□□□□ -0.83
TRAPPC11-206ENST00000509857 KRIT1O00522 736 aa9.88□□□□□ -0.83
TRAPPC11-206ENST00000509857 CDC45O75419 566 aa9.88□□□□□ -0.83
TRAPPC11-206ENST00000509857 GNAT1P11488 350 aa9.88□□□□□ -0.83
TRAPPC11-206ENST00000509857 NCAM1P13591 858 aa9.88□□□□□ -0.83
TRAPPC11-206ENST00000509857 RAP1GAPP47736 663 aa9.88□□□□□ -0.83
TRAPPC11-206ENST00000509857 FGD2Q7Z6J4 655 aa9.88□□□□□ -0.83
TRAPPC11-206ENST00000509857 MILR1Q7Z6M3 343 aa9.88□□□□□ -0.83
TRAPPC11-206ENST00000509857 CILP2Q8IUL8 1156 aa9.88□□□□□ -0.83
TRAPPC11-206ENST00000509857 NLGN1Q8N2Q7 840 aa9.88□□□□□ -0.83
TRAPPC11-206ENST00000509857 UHMK1Q8TAS1 419 aaKnown RBP9.88□□□□□ -0.83
TRAPPC11-206ENST00000509857 FBXW5Q969U6 566 aa9.88□□□□□ -0.83
TRAPPC11-206ENST00000509857 SIGLEC10Q96LC7 697 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms