RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 C16orf70Q9BSU1 422 aa18.56■□□□□ 0.56
RAB40C-202ENST00000509637 MAF1Q9H063 256 aa18.56■□□□□ 0.56
RAB40C-202ENST00000509637 RWDD1Q9H446 243 aaPredicted RBP18.56■□□□□ 0.56
RAB40C-202ENST00000509637 DIAPH3Q9NSV4 1193 aa18.56■□□□□ 0.56
RAB40C-202ENST00000509637 NOD1Q9Y239 953 aa18.56■□□□□ 0.56
RAB40C-202ENST00000509637 B4DLN1 442 aa18.55■□□□□ 0.56
RAB40C-202ENST00000509637 BAIAP3O94812 1187 aa18.55■□□□□ 0.56
RAB40C-202ENST00000509637 MYCLP12524 364 aaPredicted RBP18.55■□□□□ 0.56
RAB40C-202ENST00000509637 MRPL12P52815 198 aaKnown RBP18.55■□□□□ 0.56
RAB40C-202ENST00000509637 MFAP1P55081 439 aaKnown RBP18.55■□□□□ 0.56
RAB40C-202ENST00000509637 DGKDQ16760 1214 aa18.55■□□□□ 0.56
RAB40C-202ENST00000509637 CCDC178Q5BJE1 867 aa18.55■□□□□ 0.56
RAB40C-202ENST00000509637 VSIG10LQ86VR7 867 aa18.55■□□□□ 0.56
RAB40C-202ENST00000509637 MPHOSPH6Q99547 160 aaKnown RBP18.55■□□□□ 0.56
RAB40C-202ENST00000509637 EPHX3Q9H6B9 360 aa18.55■□□□□ 0.56
RAB40C-202ENST00000509637 SUGCTQ9HAC7 445 aa18.55■□□□□ 0.56
RAB40C-202ENST00000509637 CD320Q9NPF0 282 aa18.55■□□□□ 0.56
RAB40C-202ENST00000509637 DHX16O60231 1041 aaKnown RBP18.54■□□□□ 0.56
RAB40C-202ENST00000509637 SEMA3FQ13275 785 aa18.54■□□□□ 0.56
RAB40C-202ENST00000509637 LAMC2Q13753 1193 aa18.54■□□□□ 0.56
RAB40C-202ENST00000509637 PGM5Q15124 567 aa18.54■□□□□ 0.56
RAB40C-202ENST00000509637 SKIV2LQ15477 1246 aaKnown RBP18.54■□□□□ 0.56
RAB40C-202ENST00000509637 IMMTQ16891 758 aaKnown RBP18.54■□□□□ 0.56
RAB40C-202ENST00000509637 CELF3Q5SZQ8 465 aaKnown RBP18.54■□□□□ 0.56
RAB40C-202ENST00000509637 CNKSR3Q6P9H4 555 aa18.54■□□□□ 0.56
RAB40C-202ENST00000509637 DHX37Q8IY37 1157 aaKnown RBP18.54■□□□□ 0.56
RAB40C-202ENST00000509637 PPTC7Q8NI37 304 aa18.54■□□□□ 0.56
RAB40C-202ENST00000509637 GDPD5Q8WTR4 605 aa18.54■□□□□ 0.56
RAB40C-202ENST00000509637 PIGSQ96S52 555 aa18.54■□□□□ 0.56
RAB40C-202ENST00000509637 AMNQ9BXJ7 453 aa18.54■□□□□ 0.56
RAB40C-202ENST00000509637 RIOX1Q9H6W3 641 aa18.54■□□□□ 0.56
RAB40C-202ENST00000509637 MRVI1Q9Y6F6 885 aa18.54■□□□□ 0.56
RAB40C-202ENST00000509637 ZBTB5O15062 677 aa18.53■□□□□ 0.56
RAB40C-202ENST00000509637 PTK7Q13308 1070 aa18.53■□□□□ 0.56
RAB40C-202ENST00000509637 IFIT1BQ5T764 474 aaKnown RBP18.53■□□□□ 0.56
RAB40C-202ENST00000509637 FAM117BQ6P1L5 589 aa18.53■□□□□ 0.56
RAB40C-202ENST00000509637 KRT23Q9C075 422 aa18.53■□□□□ 0.56
RAB40C-202ENST00000509637 PCDHA1Q9Y5I3 950 aa18.53■□□□□ 0.56
RAB40C-202ENST00000509637 BDP1A6H8Y1 2624 aa18.53■□□□□ 0.56
RAB40C-202ENST00000509637 DOCK5Q9H7D0 1870 aa18.52■□□□□ 0.56
RAB40C-202ENST00000509637 LINC01553A4QN01 128 aa18.52■□□□□ 0.56
RAB40C-202ENST00000509637 GJB5O95377 273 aa18.52■□□□□ 0.56
RAB40C-202ENST00000509637 GGPS1O95749 300 aa18.52■□□□□ 0.56
RAB40C-202ENST00000509637 CYP21A2P08686 494 aa18.52■□□□□ 0.56
RAB40C-202ENST00000509637 UBA1P22314 1058 aaKnown RBP18.52■□□□□ 0.56
RAB40C-202ENST00000509637 HOXC8P31273 242 aa18.52■□□□□ 0.56
RAB40C-202ENST00000509637 MRPS9P82933 396 aaKnown RBP18.52■□□□□ 0.56
RAB40C-202ENST00000509637 GRM4Q14833 912 aa18.52■□□□□ 0.56
RAB40C-202ENST00000509637 C7orf31Q8N865 590 aa18.52■□□□□ 0.56
RAB40C-202ENST00000509637 MTUS1Q9ULD2 1270 aa18.52■□□□□ 0.56
RAB40C-202ENST00000509637 GTPBP6O43824 516 aaPredicted RBP18.51■□□□□ 0.55
RAB40C-202ENST00000509637 ANTXR2P58335 489 aa18.51■□□□□ 0.55
RAB40C-202ENST00000509637 ERVK-21P61565 698 aa18.51■□□□□ 0.55
RAB40C-202ENST00000509637 DBF4BQ8NFT6 615 aa18.51■□□□□ 0.55
RAB40C-202ENST00000509637 SPATA33Q96N06 139 aa18.51■□□□□ 0.55
RAB40C-202ENST00000509637 UBAC1Q9BSL1 405 aa18.51■□□□□ 0.55
RAB40C-202ENST00000509637 ABHD14A-ACY1A0A1B0GW23 586 aa18.5■□□□□ 0.55
RAB40C-202ENST00000509637 KIF28PB7ZC32 967 aa18.5■□□□□ 0.55
RAB40C-202ENST00000509637 PPFIA4O75335 1185 aa18.5■□□□□ 0.55
RAB40C-202ENST00000509637 LGR5O75473 907 aa18.5■□□□□ 0.55
RAB40C-202ENST00000509637 KCNJ6P48051 423 aa18.5■□□□□ 0.55
RAB40C-202ENST00000509637 NT5C2P49902 561 aa18.5■□□□□ 0.55
RAB40C-202ENST00000509637 TROAPQ12815 778 aa18.5■□□□□ 0.55
RAB40C-202ENST00000509637 SERINC5Q86VE9 423 aa18.5■□□□□ 0.55
RAB40C-202ENST00000509637 FCHSD1Q86WN1 690 aa18.5■□□□□ 0.55
RAB40C-202ENST00000509637 HOMER1Q86YM7 354 aa18.5■□□□□ 0.55
RAB40C-202ENST00000509637 C17orf80Q9BSJ5 609 aa18.5■□□□□ 0.55
RAB40C-202ENST00000509637 C11orf16Q9NQ32 467 aa18.5■□□□□ 0.55
RAB40C-202ENST00000509637 CTNNA3Q9UI47 895 aa18.5■□□□□ 0.55
RAB40C-202ENST00000509637 SUPT16HQ9Y5B9 1047 aaKnown RBP18.5■□□□□ 0.55
RAB40C-202ENST00000509637 MICAL3Q7RTP6 2002 aa18.49■□□□□ 0.55
RAB40C-202ENST00000509637 TREHO43280 583 aa18.49■□□□□ 0.55
RAB40C-202ENST00000509637 CCDC155Q8N6L0 562 aa18.49■□□□□ 0.55
RAB40C-202ENST00000509637 RAD9AQ99638 391 aa18.49■□□□□ 0.55
RAB40C-202ENST00000509637 TSPYL2Q9H2G4 693 aaPredicted RBP18.49■□□□□ 0.55
RAB40C-202ENST00000509637 RNPEPQ9H4A4 650 aa18.49■□□□□ 0.55
RAB40C-202ENST00000509637 CNNM2Q9H8M5 875 aa18.49■□□□□ 0.55
RAB40C-202ENST00000509637 MYO7AQ13402 2215 aa18.48■□□□□ 0.55
RAB40C-202ENST00000509637 HIP1O00291 1037 aa18.48■□□□□ 0.55
RAB40C-202ENST00000509637 AAMPQ13685 434 aa18.48■□□□□ 0.55
RAB40C-202ENST00000509637 TTC22Q5TAA0 569 aa18.48■□□□□ 0.55
RAB40C-202ENST00000509637 IGDCC4Q8TDY8 1250 aa18.48■□□□□ 0.55
RAB40C-202ENST00000509637 HLA-CQ95604 372 aa18.48■□□□□ 0.55
RAB40C-202ENST00000509637 ZBED2Q9BTP6 218 aa18.48■□□□□ 0.55
RAB40C-202ENST00000509637 COG5Q9UP83 839 aa18.48■□□□□ 0.55
RAB40C-202ENST00000509637 SIP14410 1827 aa18.48■□□□□ 0.55
RAB40C-202ENST00000509637 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.47■□□□□ 0.55
RAB40C-202ENST00000509637 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.47■□□□□ 0.55
RAB40C-202ENST00000509637 LGALS2P05162 132 aa18.47■□□□□ 0.55
RAB40C-202ENST00000509637 SMIM10L2AP0DMW4 78 aa18.47■□□□□ 0.55
RAB40C-202ENST00000509637 SMIM10L2BP0DMW5 78 aa18.47■□□□□ 0.55
RAB40C-202ENST00000509637 CHMLP26374 656 aa18.47■□□□□ 0.55
RAB40C-202ENST00000509637 ADAM17P78536 824 aa18.47■□□□□ 0.55
RAB40C-202ENST00000509637 HTRA4P83105 476 aaPredicted RBP18.47■□□□□ 0.55
RAB40C-202ENST00000509637 IKBKEQ14164 716 aa18.47■□□□□ 0.55
RAB40C-202ENST00000509637 PLEKHG4Q58EX7 1191 aa18.47■□□□□ 0.55
RAB40C-202ENST00000509637 TRIM50Q86XT4 487 aa18.47■□□□□ 0.55
RAB40C-202ENST00000509637 PIBF1Q8WXW3 757 aa18.47■□□□□ 0.55
RAB40C-202ENST00000509637 KATNAL1Q9BW62 490 aa18.47■□□□□ 0.55
RAB40C-202ENST00000509637 MAP3K20Q9NYL2 800 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms