RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 RTEL1Q9NZ71 1219 aa20.68■□□□□ 0.9
TPM3-220ENST00000509601 SPATA31C2B4DYI2 1134 aa20.67■□□□□ 0.9
TPM3-220ENST00000509601 PSEN2P49810 448 aa20.67■□□□□ 0.9
TPM3-220ENST00000509601 FUT2Q10981 343 aa20.67■□□□□ 0.9
TPM3-220ENST00000509601 KRT32Q14532 448 aa20.67■□□□□ 0.9
TPM3-220ENST00000509601 PTGISQ16647 500 aa20.67■□□□□ 0.9
TPM3-220ENST00000509601 SYNE3Q6ZMZ3 975 aa20.67■□□□□ 0.9
TPM3-220ENST00000509601 OTOP2Q7RTS6 562 aa20.67■□□□□ 0.9
TPM3-220ENST00000509601 SMARCC2Q8TAQ2 1214 aa20.67■□□□□ 0.9
TPM3-220ENST00000509601 SPATA33Q96N06 139 aa20.67■□□□□ 0.9
TPM3-220ENST00000509601 PSTPIP2Q9H939 334 aa20.67■□□□□ 0.9
TPM3-220ENST00000509601 FAM217BQ9NTX9 383 aaPredicted RBP20.67■□□□□ 0.9
TPM3-220ENST00000509601 HDAC6Q9UBN7 1215 aa20.67■□□□□ 0.9
TPM3-220ENST00000509601 A0A0C4DFX4 3053 aa20.66■□□□□ 0.9
TPM3-220ENST00000509601 STAM2O75886 525 aa20.66■□□□□ 0.9
TPM3-220ENST00000509601 IQCF3P0C7M6 154 aa20.66■□□□□ 0.9
TPM3-220ENST00000509601 PBX2P40425 430 aa20.66■□□□□ 0.9
TPM3-220ENST00000509601 CUL5Q93034 780 aa20.66■□□□□ 0.9
TPM3-220ENST00000509601 PBX4Q9BYU1 374 aa20.66■□□□□ 0.9
TPM3-220ENST00000509601 TRIP12Q14669 1992 aaPredicted RBP20.65■□□□□ 0.9
TPM3-220ENST00000509601 TMEM265A0A087WTH1 108 aa20.65■□□□□ 0.9
TPM3-220ENST00000509601 PITPNM1O00562 1244 aa20.65■□□□□ 0.9
TPM3-220ENST00000509601 F2P00734 622 aa20.65■□□□□ 0.9
TPM3-220ENST00000509601 ZNF286BP0CG31 522 aa20.65■□□□□ 0.9
TPM3-220ENST00000509601 CPA1P15085 419 aa20.65■□□□□ 0.9
TPM3-220ENST00000509601 DNAJB2P25686 324 aa20.65■□□□□ 0.9
TPM3-220ENST00000509601 HSPA4P34932 840 aa20.65■□□□□ 0.9
TPM3-220ENST00000509601 MFSD10Q14728 455 aa20.65■□□□□ 0.9
TPM3-220ENST00000509601 KIAA0753Q2KHM9 967 aa20.65■□□□□ 0.9
TPM3-220ENST00000509601 PCNX4Q63HM2 1172 aa20.65■□□□□ 0.9
TPM3-220ENST00000509601 C16orf70Q9BSU1 422 aa20.65■□□□□ 0.9
TPM3-220ENST00000509601 ALG1Q9BT22 464 aa20.65■□□□□ 0.9
TPM3-220ENST00000509601 MLXIPQ9HAP2 919 aa20.65■□□□□ 0.9
TPM3-220ENST00000509601 GTF2IRD1Q9UHL9 959 aa20.65■□□□□ 0.9
TPM3-220ENST00000509601 SNX14Q9Y5W7 946 aa20.65■□□□□ 0.9
TPM3-220ENST00000509601 ZBTB43O43298 467 aa20.64■□□□□ 0.89
TPM3-220ENST00000509601 HMGB1P09429 215 aaKnown RBP20.64■□□□□ 0.89
TPM3-220ENST00000509601 HIC1Q14526 733 aa20.64■□□□□ 0.89
TPM3-220ENST00000509601 GPNMBQ14956 572 aa20.64■□□□□ 0.89
TPM3-220ENST00000509601 GNPTABQ3T906 1256 aa20.64■□□□□ 0.89
TPM3-220ENST00000509601 XRRA1Q6P2D8 792 aa20.64■□□□□ 0.89
TPM3-220ENST00000509601 DEFB128Q7Z7B8 93 aa20.64■□□□□ 0.89
TPM3-220ENST00000509601 RETREG2Q8NC44 543 aa20.64■□□□□ 0.89
TPM3-220ENST00000509601 SLC17A8Q8NDX2 589 aa20.64■□□□□ 0.89
TPM3-220ENST00000509601 DHX38Q92620 1227 aaKnown RBP20.64■□□□□ 0.89
TPM3-220ENST00000509601 RBM28Q9NW13 759 aaKnown RBP20.64■□□□□ 0.89
TPM3-220ENST00000509601 TELO2Q9Y4R8 837 aa20.64■□□□□ 0.89
TPM3-220ENST00000509601 SCN5AQ14524 2016 aa20.63■□□□□ 0.89
TPM3-220ENST00000509601 CNTNAP5Q8WYK1 1306 aa20.63■□□□□ 0.89
TPM3-220ENST00000509601 CDC27P30260 824 aa20.63■□□□□ 0.89
TPM3-220ENST00000509601 ZNF200P98182 395 aaPredicted RBP20.63■□□□□ 0.89
TPM3-220ENST00000509601 BFSP2Q13515 415 aa20.63■□□□□ 0.89
TPM3-220ENST00000509601 NEDD9Q14511 834 aa20.63■□□□□ 0.89
TPM3-220ENST00000509601 GRIN2CQ14957 1233 aa20.63■□□□□ 0.89
TPM3-220ENST00000509601 UBE2SQ16763 222 aa20.63■□□□□ 0.89
TPM3-220ENST00000509601 RTN1Q16799 776 aa20.63■□□□□ 0.89
TPM3-220ENST00000509601 TYW1BQ6NUM6 668 aa20.63■□□□□ 0.89
TPM3-220ENST00000509601 CYFIP1Q7L576 1253 aa20.63■□□□□ 0.89
TPM3-220ENST00000509601 C7orf31Q8N865 590 aa20.63■□□□□ 0.89
TPM3-220ENST00000509601 TIFAQ96CG3 184 aa20.63■□□□□ 0.89
TPM3-220ENST00000509601 KATNAL1Q9BW62 490 aa20.63■□□□□ 0.89
TPM3-220ENST00000509601 NOD1Q9Y239 953 aa20.63■□□□□ 0.89
TPM3-220ENST00000509601 V9GY48 417 aaPredicted RBP20.63■□□□□ 0.89
TPM3-220ENST00000509601 TET1Q8NFU7 2136 aa20.63■□□□□ 0.89
TPM3-220ENST00000509601 MYO9BQ13459 2157 aa20.62■□□□□ 0.89
TPM3-220ENST00000509601 KLF18A0A0U1RQI7 1052 aa20.62■□□□□ 0.89
TPM3-220ENST00000509601 FIBPO43427 364 aa20.62■□□□□ 0.89
TPM3-220ENST00000509601 PFKMP08237 780 aa20.62■□□□□ 0.89
TPM3-220ENST00000509601 RFC2P35250 354 aa20.62■□□□□ 0.89
TPM3-220ENST00000509601 WWC2Q6AWC2 1192 aa20.62■□□□□ 0.89
TPM3-220ENST00000509601 METTL7BQ6UX53 244 aa20.62■□□□□ 0.89
TPM3-220ENST00000509601 HEATR3Q7Z4Q2 680 aa20.62■□□□□ 0.89
TPM3-220ENST00000509601 MYLIPQ8WY64 445 aa20.62■□□□□ 0.89
TPM3-220ENST00000509601 SENP7Q9BQF6 1050 aa20.62■□□□□ 0.89
TPM3-220ENST00000509601 ZNF576Q9H609 170 aa20.62■□□□□ 0.89
TPM3-220ENST00000509601 PCDHA6Q9UN73 950 aa20.62■□□□□ 0.89
TPM3-220ENST00000509601 PCDHA8Q9Y5H6 950 aa20.62■□□□□ 0.89
TPM3-220ENST00000509601 ATP9AO75110 1047 aa20.61■□□□□ 0.89
TPM3-220ENST00000509601 ADD1P35611 737 aaKnown RBP20.61■□□□□ 0.89
TPM3-220ENST00000509601 RBL2Q08999 1139 aa20.61■□□□□ 0.89
TPM3-220ENST00000509601 TRIM71Q2Q1W2 868 aaKnown RBP20.61■□□□□ 0.89
TPM3-220ENST00000509601 Q6ZUG5 572 aa20.61■□□□□ 0.89
TPM3-220ENST00000509601 CAGE1Q8TC20 777 aa20.61■□□□□ 0.89
TPM3-220ENST00000509601 WNT8BQ93098 351 aa20.61■□□□□ 0.89
TPM3-220ENST00000509601 JAKMIP1Q96N16 626 aaKnown RBP20.61■□□□□ 0.89
TPM3-220ENST00000509601 GPR20Q99678 358 aa20.61■□□□□ 0.89
TPM3-220ENST00000509601 MTIF3Q9H2K0 278 aaKnown RBP20.61■□□□□ 0.89
TPM3-220ENST00000509601 EYSQ5T1H1 3165 aa20.61■□□□□ 0.89
TPM3-220ENST00000509601 GOLGA8AA7E2F4 631 aa20.6■□□□□ 0.89
TPM3-220ENST00000509601 GOLGA8BA8MQT2 603 aa20.6■□□□□ 0.89
TPM3-220ENST00000509601 ITGB5P18084 799 aa20.6■□□□□ 0.89
TPM3-220ENST00000509601 RCAN1P53805 252 aa20.6■□□□□ 0.89
TPM3-220ENST00000509601 APOBRQ0VD83 1088 aa20.6■□□□□ 0.89
TPM3-220ENST00000509601 NLRX1Q86UT6 975 aa20.6■□□□□ 0.89
TPM3-220ENST00000509601 FBXL16Q8N461 479 aa20.6■□□□□ 0.89
TPM3-220ENST00000509601 AFAP1L1Q8TED9 768 aa20.6■□□□□ 0.89
TPM3-220ENST00000509601 YBX2Q9Y2T7 364 aaKnown RBP20.6■□□□□ 0.89
TPM3-220ENST00000509601 UBIAD1Q9Y5Z9 338 aa20.6■□□□□ 0.89
TPM3-220ENST00000509601 SLC4A7Q9Y6M7 1214 aa20.6■□□□□ 0.89
TPM3-220ENST00000509601 CHD9Q3L8U1 2897 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms