RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 PHOSPHO2Q8TCD6 241 aa17.78■□□□□ 0.44
TPM3-219ENST00000509409 SYMPKQ92797 1274 aaKnown RBP17.78■□□□□ 0.44
TPM3-219ENST00000509409 CUL5Q93034 780 aa17.78■□□□□ 0.44
TPM3-219ENST00000509409 SLC9A7Q96T83 725 aa17.78■□□□□ 0.44
TPM3-219ENST00000509409 LY9Q9HBG7 655 aa17.78■□□□□ 0.44
TPM3-219ENST00000509409 SEC63Q9UGP8 760 aaKnown RBP17.78■□□□□ 0.44
TPM3-219ENST00000509409 SCN10AQ9Y5Y9 1956 aa17.77■□□□□ 0.44
TPM3-219ENST00000509409 DDAH1O94760 285 aa17.77■□□□□ 0.44
TPM3-219ENST00000509409 HOXD11P31277 338 aaPredicted RBP17.77■□□□□ 0.44
TPM3-219ENST00000509409 MCM5P33992 734 aa17.77■□□□□ 0.44
TPM3-219ENST00000509409 GNAQP50148 359 aa17.77■□□□□ 0.44
TPM3-219ENST00000509409 HSDL1Q3SXM5 330 aa17.77■□□□□ 0.44
TPM3-219ENST00000509409 GNPTABQ3T906 1256 aa17.77■□□□□ 0.44
TPM3-219ENST00000509409 LRRC8DQ7L1W4 858 aa17.77■□□□□ 0.44
TPM3-219ENST00000509409 MICALL1Q8N3F8 863 aa17.77■□□□□ 0.44
TPM3-219ENST00000509409 GPKOWQ92917 476 aaPredicted RBP eCLIP17.77■□□□□ 0.441e-12■□□□□ 9.1
TPM3-219ENST00000509409 MAP3K14Q99558 947 aa17.77■□□□□ 0.44
TPM3-219ENST00000509409 LZTS2Q9BRK4 669 aa17.77■□□□□ 0.44
TPM3-219ENST00000509409 PRDM6Q9NQX0 595 aa17.77■□□□□ 0.44
TPM3-219ENST00000509409 RTEL1Q9NZ71 1219 aa17.77■□□□□ 0.44
TPM3-219ENST00000509409 HAS3O00219 553 aa17.76■□□□□ 0.43
TPM3-219ENST00000509409 BAIAP3O94812 1187 aa17.76■□□□□ 0.43
TPM3-219ENST00000509409 PARNO95453 639 aaKnown RBP17.76■□□□□ 0.43
TPM3-219ENST00000509409 F2P00734 622 aa17.76■□□□□ 0.43
TPM3-219ENST00000509409 CA3P07451 260 aa17.76■□□□□ 0.43
TPM3-219ENST00000509409 CKBP12277 381 aa17.76■□□□□ 0.43
TPM3-219ENST00000509409 UBA1P22314 1058 aaKnown RBP17.76■□□□□ 0.43
TPM3-219ENST00000509409 ZNF200P98182 395 aaPredicted RBP17.76■□□□□ 0.43
TPM3-219ENST00000509409 PTK7Q13308 1070 aa17.76■□□□□ 0.43
TPM3-219ENST00000509409 DHX38Q92620 1227 aaKnown RBP17.76■□□□□ 0.43
TPM3-219ENST00000509409 CTAGE1Q96RT6 745 aa17.76■□□□□ 0.43
TPM3-219ENST00000509409 LSG1Q9H089 658 aaKnown RBP17.76■□□□□ 0.43
TPM3-219ENST00000509409 CERS4Q9HA82 394 aa17.76■□□□□ 0.43
TPM3-219ENST00000509409 PRUNE2Q8WUY3 3088 aa17.76■□□□□ 0.43
TPM3-219ENST00000509409 NOP56O00567 594 aaKnown RBP17.75■□□□□ 0.43
TPM3-219ENST00000509409 SLC27A2O14975 620 aa17.75■□□□□ 0.43
TPM3-219ENST00000509409 TJAP1Q5JTD0 557 aa17.75■□□□□ 0.43
TPM3-219ENST00000509409 HERC6Q8IVU3 1022 aa17.75■□□□□ 0.43
TPM3-219ENST00000509409 TMEM87BQ96K49 555 aa17.75■□□□□ 0.43
TPM3-219ENST00000509409 ESYT1Q9BSJ8 1104 aa17.75■□□□□ 0.43
TPM3-219ENST00000509409 MTA3Q9BTC8 594 aa17.75■□□□□ 0.43
TPM3-219ENST00000509409 ZBED2Q9BTP6 218 aa17.75■□□□□ 0.43
TPM3-219ENST00000509409 SPZ1Q9BXG8 430 aa17.75■□□□□ 0.43
TPM3-219ENST00000509409 ANO2Q9NQ90 1003 aa17.75■□□□□ 0.43
TPM3-219ENST00000509409 CUL9Q8IWT3 2517 aa17.75■□□□□ 0.43
TPM3-219ENST00000509409 SH2B2O14492 632 aaPredicted RBP17.74■□□□□ 0.43
TPM3-219ENST00000509409 TLL1O43897 1013 aa17.74■□□□□ 0.43
TPM3-219ENST00000509409 STAM2O75886 525 aa17.74■□□□□ 0.43
TPM3-219ENST00000509409 SMARCA1P28370 1054 aa17.74■□□□□ 0.43
TPM3-219ENST00000509409 MRPS9P82933 396 aaKnown RBP17.74■□□□□ 0.43
TPM3-219ENST00000509409 NEDD9Q14511 834 aa17.74■□□□□ 0.43
TPM3-219ENST00000509409 CREB3L3Q68CJ9 461 aa17.74■□□□□ 0.43
TPM3-219ENST00000509409 CNKSR3Q6P9H4 555 aa17.74■□□□□ 0.43
TPM3-219ENST00000509409 USP17L6PQ6QN14 398 aa17.74■□□□□ 0.43
TPM3-219ENST00000509409 CYFIP1Q7L576 1253 aa17.74■□□□□ 0.43
TPM3-219ENST00000509409 TSPYL2Q9H2G4 693 aaPredicted RBP17.74■□□□□ 0.43
TPM3-219ENST00000509409 BCAS3Q9H6U6 928 aa17.74■□□□□ 0.43
TPM3-219ENST00000509409 MYO9BQ13459 2157 aa17.73■□□□□ 0.43
TPM3-219ENST00000509409 MYH6P13533 1939 aa17.73■□□□□ 0.43
TPM3-219ENST00000509409 C17orf102A2RUQ5 167 aa17.73■□□□□ 0.43
TPM3-219ENST00000509409 SPATA31C2B4DYI2 1134 aa17.73■□□□□ 0.43
TPM3-219ENST00000509409 H3BRB1 525 aa17.73■□□□□ 0.43
TPM3-219ENST00000509409 RFXAPO00287 272 aa17.73■□□□□ 0.43
TPM3-219ENST00000509409 NBNO60934 754 aa17.73■□□□□ 0.43
TPM3-219ENST00000509409 PLEKHA8P1O95397 391 aa17.73■□□□□ 0.43
TPM3-219ENST00000509409 CALM1P0DP23 149 aa17.73■□□□□ 0.43
TPM3-219ENST00000509409 CALM2P0DP24 149 aa17.73■□□□□ 0.43
TPM3-219ENST00000509409 CALM3P0DP25 149 aa17.73■□□□□ 0.43
TPM3-219ENST00000509409 HOXD8P13378 290 aaPredicted RBP17.73■□□□□ 0.43
TPM3-219ENST00000509409 RXRAP19793 462 aa17.73■□□□□ 0.43
TPM3-219ENST00000509409 GPNMBQ14956 572 aa17.73■□□□□ 0.43
TPM3-219ENST00000509409 ZNF618Q5T7W0 954 aa17.73■□□□□ 0.43
TPM3-219ENST00000509409 RAB11FIP4Q86YS3 637 aa17.73■□□□□ 0.43
TPM3-219ENST00000509409 CMTR1Q8N1G2 835 aaKnown RBP17.73■□□□□ 0.43
TPM3-219ENST00000509409 CCDC82Q8N4S0 544 aa17.73■□□□□ 0.43
TPM3-219ENST00000509409 SRBD1Q8N5C6 995 aaKnown RBP17.73■□□□□ 0.43
TPM3-219ENST00000509409 C16orf70Q9BSU1 422 aa17.73■□□□□ 0.43
TPM3-219ENST00000509409 LRRC2Q9BYS8 371 aa17.73■□□□□ 0.43
TPM3-219ENST00000509409 TUT1Q9H6E5 874 aaKnown RBP17.73■□□□□ 0.43
TPM3-219ENST00000509409 THEGQ9P2T0 379 aa17.73■□□□□ 0.43
TPM3-219ENST00000509409 SLC12A7Q9Y666 1083 aa17.73■□□□□ 0.43
TPM3-219ENST00000509409 BAZ2BQ9UIF8 2168 aaKnown RBP17.73■□□□□ 0.43
TPM3-219ENST00000509409 FIBPO43427 364 aa17.72■□□□□ 0.43
TPM3-219ENST00000509409 GTPBP6O43824 516 aaPredicted RBP17.72■□□□□ 0.43
TPM3-219ENST00000509409 CXCL10P02778 98 aa17.72■□□□□ 0.43
TPM3-219ENST00000509409 ICAM3P32942 547 aa17.72■□□□□ 0.43
TPM3-219ENST00000509409 THPOP40225 353 aa17.72■□□□□ 0.43
TPM3-219ENST00000509409 LIFRP42702 1097 aa17.72■□□□□ 0.43
TPM3-219ENST00000509409 WDR5P61964 334 aaKnown RBP17.72■□□□□ 0.43
TPM3-219ENST00000509409 RBL2Q08999 1139 aa17.72■□□□□ 0.43
TPM3-219ENST00000509409 IKBKEQ14164 716 aa17.72■□□□□ 0.43
TPM3-219ENST00000509409 SKIV2LQ15477 1246 aaKnown RBP17.72■□□□□ 0.43
TPM3-219ENST00000509409 UTP14CQ5TAP6 766 aaKnown RBP17.72■□□□□ 0.43
TPM3-219ENST00000509409 SYNE3Q6ZMZ3 975 aa17.72■□□□□ 0.43
TPM3-219ENST00000509409 NLRX1Q86UT6 975 aa17.72■□□□□ 0.43
TPM3-219ENST00000509409 ATXN2LQ8WWM7 1075 aaKnown RBP17.72■□□□□ 0.43
TPM3-219ENST00000509409 ARNTL2Q8WYA1 636 aa17.72■□□□□ 0.43
TPM3-219ENST00000509409 ATP6V0A1Q93050 837 aa17.72■□□□□ 0.43
TPM3-219ENST00000509409 INPP4AQ96PE3 977 aaPredicted RBP17.72■□□□□ 0.43
TPM3-219ENST00000509409 USP26Q9BXU7 913 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms