RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 C9orf50Q5SZB4 431 aa10.04□□□□□ -0.8
PDLIM5-213ENST00000509357 KCNV1Q6PIU1 500 aa10.04□□□□□ -0.8
PDLIM5-213ENST00000509357 USP17L6PQ6QN14 398 aa10.04□□□□□ -0.8
PDLIM5-213ENST00000509357 HEATR3Q7Z4Q2 680 aa10.04□□□□□ -0.8
PDLIM5-213ENST00000509357 FAM126BQ8IXS8 530 aa10.04□□□□□ -0.8
PDLIM5-213ENST00000509357 DHX37Q8IY37 1157 aaKnown RBP10.04□□□□□ -0.8
PDLIM5-213ENST00000509357 AFG1LQ8WV93 481 aa10.04□□□□□ -0.8
PDLIM5-213ENST00000509357 TMX3Q96JJ7 454 aa10.04□□□□□ -0.8
PDLIM5-213ENST00000509357 ZFP91Q96JP5 570 aaPredicted RBP10.04□□□□□ -0.8
PDLIM5-213ENST00000509357 PGBD1Q96JS3 809 aa10.04□□□□□ -0.8
PDLIM5-213ENST00000509357 SLC26A6Q9BXS9 759 aa10.04□□□□□ -0.8
PDLIM5-213ENST00000509357 TRPV6Q9H1D0 765 aa10.04□□□□□ -0.8
PDLIM5-213ENST00000509357 TMEM260Q9NX78 707 aa10.04□□□□□ -0.8
PDLIM5-213ENST00000509357 VPS54Q9P1Q0 977 aa10.04□□□□□ -0.8
PDLIM5-213ENST00000509357 LIMCH1Q9UPQ0 1083 aa10.04□□□□□ -0.8
PDLIM5-213ENST00000509357 NOD1Q9Y239 953 aa10.04□□□□□ -0.8
PDLIM5-213ENST00000509357 A6NJR5 290 aa10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 M0R2N6 131 aa10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 SUPT20HL2P0C7V6 817 aa10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 SCG2P13521 617 aa10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 CYP2C18P33260 490 aa10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 CLK2P49760 499 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 PURAQ00577 322 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 PPIGQ13427 754 aaKnown RBP eCLIP10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 LAMC2Q13753 1193 aa10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 DGKDQ16760 1214 aa10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 NBPF20Q3BBV1 942 aa10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 GNPTABQ3T906 1256 aa10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 MFSD5Q6N075 450 aa10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 CCDC62Q6P9F0 684 aa10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 VSIG10LQ86VR7 867 aa10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 RASGRP4Q8TDF6 673 aa10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 RNPC3Q96LT9 517 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 RNF26Q9BY78 433 aaPredicted RBP10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 SLKQ9H2G2 1235 aaPredicted RBP10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 HIPK3Q9H422 1215 aa10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 PSTPIP2Q9H939 334 aa10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 MLXIPQ9HAP2 919 aa10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 BARHL2Q9NY43 387 aa10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 DDX41Q9UJV9 622 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 TBX21Q9UL17 535 aa10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 FRMPD4Q14CM0 1322 aa10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 STK36Q9NRP7 1315 aa10.03□□□□□ -0.8
PDLIM5-213ENST00000509357 SPDYE3A6NKU9 549 aa10.02□□□□□ -0.81
PDLIM5-213ENST00000509357 RBAK-RBAKDNI3L0D1 243 aa10.02□□□□□ -0.81
PDLIM5-213ENST00000509357 B4GALT4O60513 344 aa10.02□□□□□ -0.81
PDLIM5-213ENST00000509357 EIF5BO60841 1220 aaKnown RBP10.02□□□□□ -0.81
PDLIM5-213ENST00000509357 RGS20O76081 388 aa10.02□□□□□ -0.81
PDLIM5-213ENST00000509357 CD4P01730 458 aa10.02□□□□□ -0.81
PDLIM5-213ENST00000509357 MMP3P08254 477 aa10.02□□□□□ -0.81
PDLIM5-213ENST00000509357 CCL23P55773 120 aa10.02□□□□□ -0.81
PDLIM5-213ENST00000509357 ARHGAP1Q07960 439 aa10.02□□□□□ -0.81
PDLIM5-213ENST00000509357 ANKRD1Q15327 319 aa10.02□□□□□ -0.81
PDLIM5-213ENST00000509357 EARS2Q5JPH6 523 aaKnown RBP10.02□□□□□ -0.81
PDLIM5-213ENST00000509357 DEFB123Q8N688 67 aa10.02□□□□□ -0.81
PDLIM5-213ENST00000509357 SLC43A3Q8NBI5 491 aa10.02□□□□□ -0.81
PDLIM5-213ENST00000509357 PPP1R13LQ8WUF5 828 aa10.02□□□□□ -0.81
PDLIM5-213ENST00000509357 SPATA33Q96N06 139 aa10.02□□□□□ -0.81
PDLIM5-213ENST00000509357 TRMT13Q9NUP7 481 aaKnown RBP10.02□□□□□ -0.81
PDLIM5-213ENST00000509357 RTEL1Q9NZ71 1219 aa10.02□□□□□ -0.81
PDLIM5-213ENST00000509357 TELO2Q9Y4R8 837 aa10.02□□□□□ -0.81
PDLIM5-213ENST00000509357 SZT2Q5T011 3432 aa10.02□□□□□ -0.81
PDLIM5-213ENST00000509357 GRIN2DO15399 1336 aa10.02□□□□□ -0.81
PDLIM5-213ENST00000509357 CCDC196A0A1B0GTZ2 297 aa10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 FAM205CA6NFA0 338 aa10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 NOP56O00567 594 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 WNT7AO00755 349 aa10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 GGPS1O95749 300 aa10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 ACRP10323 421 aa10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 CYP2C9P11712 490 aa10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 CSF2RAP15509 400 aa10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 FOSBP53539 338 aa10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 EPHB4P54760 987 aa10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 NAPAP54920 295 aa10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 MRPS9P82933 396 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 SEMA3FQ13275 785 aa10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 CUL4AQ13619 759 aa10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 GPR153Q6NV75 609 aa10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 NFRKBQ6P4R8 1299 aa10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 Q7L0L9 218 aa10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 NLRX1Q86UT6 975 aa10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 C7orf31Q8N865 590 aa10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 RETREG2Q8NC44 543 aa10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 OXER1Q8TDS5 423 aa10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 CRYGNQ8WXF5 182 aa10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 ALG1Q9BT22 464 aa10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 BCAS3Q9H6U6 928 aa10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 EHMT1Q9H9B1 1298 aa10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 UPF2Q9HAU5 1272 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 KCNJ14Q9UNX9 436 aa10.01□□□□□ -0.81
PDLIM5-213ENST00000509357 WDR81Q562E7 1941 aa10□□□□□ -0.81
PDLIM5-213ENST00000509357 PIK3CDO00329 1044 aa10□□□□□ -0.81
PDLIM5-213ENST00000509357 STAM2O75886 525 aa10□□□□□ -0.81
PDLIM5-213ENST00000509357 TGFB3P10600 412 aa10□□□□□ -0.81
PDLIM5-213ENST00000509357 AKAP17AQ02040 695 aaKnown RBP10□□□□□ -0.81
PDLIM5-213ENST00000509357 PTPN11Q06124 597 aaPredicted RBP10□□□□□ -0.81
PDLIM5-213ENST00000509357 SSRP1Q08945 709 aaKnown RBP10□□□□□ -0.81
PDLIM5-213ENST00000509357 PTGISQ16647 500 aa10□□□□□ -0.81
PDLIM5-213ENST00000509357 CELF3Q5SZQ8 465 aaKnown RBP10□□□□□ -0.81
PDLIM5-213ENST00000509357 ZNF697Q5TEC3 545 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms