RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 TRAF1Q13077 416 aa12.64□□□□□ -0.39
RNF4-212ENST00000509258 PGM5Q15124 567 aa12.64□□□□□ -0.39
RNF4-212ENST00000509258 AAK1Q2M2I8 961 aa12.64□□□□□ -0.39
RNF4-212ENST00000509258 ARHGEF16Q5VV41 709 aa12.64□□□□□ -0.39
RNF4-212ENST00000509258 SESTD1Q86VW0 696 aa12.64□□□□□ -0.39
RNF4-212ENST00000509258 SRBD1Q8N5C6 995 aaKnown RBP12.64□□□□□ -0.39
RNF4-212ENST00000509258 CAGE1Q8TC20 777 aa12.64□□□□□ -0.39
RNF4-212ENST00000509258 TCEANC2Q96MN5 208 aa12.64□□□□□ -0.39
RNF4-212ENST00000509258 FTOQ9C0B1 505 aaKnown RBP eCLIP12.64□□□□□ -0.39
RNF4-212ENST00000509258 ANO2Q9NQ90 1003 aa12.64□□□□□ -0.39
RNF4-212ENST00000509258 SIP14410 1827 aa12.64□□□□□ -0.39
RNF4-212ENST00000509258 WDR81Q562E7 1941 aa12.64□□□□□ -0.39
RNF4-212ENST00000509258 TRANK1O15050 2925 aa12.63□□□□□ -0.39
RNF4-212ENST00000509258 LOXHD1Q8IVV2 1947 aa12.63□□□□□ -0.39
RNF4-212ENST00000509258 PNMA6FA0A0J9YX94 578 aa12.63□□□□□ -0.39
RNF4-212ENST00000509258 hCG_1642624A0A1W2PR95 340 aa12.63□□□□□ -0.39
RNF4-212ENST00000509258 KIF28PB7ZC32 967 aa12.63□□□□□ -0.39
RNF4-212ENST00000509258 GH1P01241 217 aa12.63□□□□□ -0.39
RNF4-212ENST00000509258 MYCLP12524 364 aaPredicted RBP12.63□□□□□ -0.39
RNF4-212ENST00000509258 POU3F3P20264 500 aaPredicted RBP12.63□□□□□ -0.39
RNF4-212ENST00000509258 CHMP4BP1P59074 171 aa12.63□□□□□ -0.39
RNF4-212ENST00000509258 MRPS9P82933 396 aaKnown RBP12.63□□□□□ -0.39
RNF4-212ENST00000509258 SEMA3FQ13275 785 aa12.63□□□□□ -0.39
RNF4-212ENST00000509258 HIC1Q14526 733 aa12.63□□□□□ -0.39
RNF4-212ENST00000509258 SKIV2LQ15477 1246 aaKnown RBP12.63□□□□□ -0.39
RNF4-212ENST00000509258 STXBP2Q15833 593 aa12.63□□□□□ -0.39
RNF4-212ENST00000509258 PTGISQ16647 500 aa12.63□□□□□ -0.39
RNF4-212ENST00000509258 ADCK5Q3MIX3 580 aa12.63□□□□□ -0.39
RNF4-212ENST00000509258 CATIPQ7Z7H3 387 aa12.63□□□□□ -0.39
RNF4-212ENST00000509258 FCHSD1Q86WN1 690 aa12.63□□□□□ -0.39
RNF4-212ENST00000509258 HERC6Q8IVU3 1022 aa12.63□□□□□ -0.39
RNF4-212ENST00000509258 AFAP1L1Q8TED9 768 aa12.63□□□□□ -0.39
RNF4-212ENST00000509258 IWS1Q96ST2 819 aa12.63□□□□□ -0.39
RNF4-212ENST00000509258 FRMPD4Q14CM0 1322 aa12.62□□□□□ -0.39
RNF4-212ENST00000509258 ERICH2A1L162 156 aa12.62□□□□□ -0.39
RNF4-212ENST00000509258 EIF3JO75822 258 aaKnown RBP12.62□□□□□ -0.39
RNF4-212ENST00000509258 PARNO95453 639 aaKnown RBP12.62□□□□□ -0.39
RNF4-212ENST00000509258 ZNF286BP0CG31 522 aa12.62□□□□□ -0.39
RNF4-212ENST00000509258 CASTP20810 708 aaKnown RBP12.62□□□□□ -0.39
RNF4-212ENST00000509258 KCNJ6P48051 423 aa12.62□□□□□ -0.39
RNF4-212ENST00000509258 GDF6Q6KF10 455 aaPredicted RBP12.62□□□□□ -0.39
RNF4-212ENST00000509258 VSIG10LQ86VR7 867 aa12.62□□□□□ -0.39
RNF4-212ENST00000509258 WNT8BQ93098 351 aa12.62□□□□□ -0.39
RNF4-212ENST00000509258 KATNAL1Q9BW62 490 aa12.62□□□□□ -0.39
RNF4-212ENST00000509258 SPZ1Q9BXG8 430 aa12.62□□□□□ -0.39
RNF4-212ENST00000509258 MTCH2Q9Y6C9 303 aa12.62□□□□□ -0.39
RNF4-212ENST00000509258 MICAL3Q7RTP6 2002 aa12.62□□□□□ -0.39
RNF4-212ENST00000509258 PRRC2BQ5JSZ5 2229 aaKnown RBP12.61□□□□□ -0.39
RNF4-212ENST00000509258 DDAH1O94760 285 aa12.61□□□□□ -0.39
RNF4-212ENST00000509258 CPA1P15085 419 aa12.61□□□□□ -0.39
RNF4-212ENST00000509258 SELPP16109 830 aa12.61□□□□□ -0.39
RNF4-212ENST00000509258 COL9A1P20849 921 aa12.61□□□□□ -0.39
RNF4-212ENST00000509258 UBA1P22314 1058 aaKnown RBP12.61□□□□□ -0.39
RNF4-212ENST00000509258 MCM5P33992 734 aa12.61□□□□□ -0.39
RNF4-212ENST00000509258 TAP1Q03518 808 aa12.61□□□□□ -0.39
RNF4-212ENST00000509258 RBL2Q08999 1139 aa12.61□□□□□ -0.39
RNF4-212ENST00000509258 GPNMBQ14956 572 aa12.61□□□□□ -0.39
RNF4-212ENST00000509258 SART3Q15020 963 aaKnown RBP12.61□□□□□ -0.39
RNF4-212ENST00000509258 DGKDQ16760 1214 aa12.61□□□□□ -0.39
RNF4-212ENST00000509258 TCTN1Q2MV58 587 aa12.61□□□□□ -0.39
RNF4-212ENST00000509258 USP17L6PQ6QN14 398 aa12.61□□□□□ -0.39
RNF4-212ENST00000509258 LRRC8DQ7L1W4 858 aa12.61□□□□□ -0.39
RNF4-212ENST00000509258 SAMD3Q8N6K7 520 aa12.61□□□□□ -0.39
RNF4-212ENST00000509258 ARNTL2Q8WYA1 636 aa12.61□□□□□ -0.39
RNF4-212ENST00000509258 DHX38Q92620 1227 aaKnown RBP12.61□□□□□ -0.39
RNF4-212ENST00000509258 EMID1Q96A84 441 aaPredicted RBP12.61□□□□□ -0.39
RNF4-212ENST00000509258 CERS4Q9HA82 394 aa12.61□□□□□ -0.39
RNF4-212ENST00000509258 MAP3K20Q9NYL2 800 aaKnown RBP12.61□□□□□ -0.39
RNF4-212ENST00000509258 BRPF3Q9ULD4 1205 aa12.61□□□□□ -0.39
RNF4-212ENST00000509258 EPOPA6NHQ4 379 aa12.6□□□□□ -0.39
RNF4-212ENST00000509258 GCOM1H8Y6P7 765 aaPredicted RBP12.6□□□□□ -0.39
RNF4-212ENST00000509258 MEIS2O14770 477 aa12.6□□□□□ -0.39
RNF4-212ENST00000509258 TLL1O43897 1013 aa12.6□□□□□ -0.39
RNF4-212ENST00000509258 F2P00734 622 aa12.6□□□□□ -0.39
RNF4-212ENST00000509258 POLR2MP0CAP2 368 aa12.6□□□□□ -0.39
RNF4-212ENST00000509258 HOXD8P13378 290 aaPredicted RBP12.6□□□□□ -0.39
RNF4-212ENST00000509258 ZNF200P98182 395 aaPredicted RBP12.6□□□□□ -0.39
RNF4-212ENST00000509258 TFF2Q03403 129 aa12.6□□□□□ -0.39
RNF4-212ENST00000509258 HSDL1Q3SXM5 330 aa12.6□□□□□ -0.39
RNF4-212ENST00000509258 MYSM1Q5VVJ2 828 aa12.6□□□□□ -0.39
RNF4-212ENST00000509258 CASC1Q6TDU7 716 aa12.6□□□□□ -0.39
RNF4-212ENST00000509258 C7orf31Q8N865 590 aa12.6□□□□□ -0.39
RNF4-212ENST00000509258 PPTC7Q8NI37 304 aa12.6□□□□□ -0.39
RNF4-212ENST00000509258 TMEM87BQ96K49 555 aa12.6□□□□□ -0.39
RNF4-212ENST00000509258 MAP3K14Q99558 947 aa12.6□□□□□ -0.39
RNF4-212ENST00000509258 HDAC6Q9UBN7 1215 aa12.6□□□□□ -0.39
RNF4-212ENST00000509258 GTF2IRD1Q9UHL9 959 aa12.6□□□□□ -0.39
RNF4-212ENST00000509258 COG5Q9UP83 839 aa12.6□□□□□ -0.39
RNF4-212ENST00000509258 MRVI1Q9Y6F6 885 aa12.6□□□□□ -0.39
RNF4-212ENST00000509258 CNTNAP5Q8WYK1 1306 aa12.6□□□□□ -0.39
RNF4-212ENST00000509258 COL4A4P53420 1690 aaPredicted RBP12.59□□□□□ -0.39
RNF4-212ENST00000509258 HAS3O00219 553 aa12.59□□□□□ -0.39
RNF4-212ENST00000509258 RFXAPO00287 272 aa12.59□□□□□ -0.39
RNF4-212ENST00000509258 ARHGEF15O94989 841 aa12.59□□□□□ -0.39
RNF4-212ENST00000509258 GGPS1O95749 300 aa12.59□□□□□ -0.39
RNF4-212ENST00000509258 BMP1P13497 986 aa12.59□□□□□ -0.39
RNF4-212ENST00000509258 LIFRP42702 1097 aa12.59□□□□□ -0.39
RNF4-212ENST00000509258 PSEN2P49810 448 aa12.59□□□□□ -0.39
RNF4-212ENST00000509258 WDR5P61964 334 aaKnown RBP12.59□□□□□ -0.39
RNF4-212ENST00000509258 EXOSC10Q01780 885 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms