RNA–Protein interactions for RNA: ENST00000508679.5

CALCOCO2-211, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2 BASIC

Gene CALCOCO2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-211ENST00000508679 TGFB3P10600 412 aa17.03■□□□□ 0.32
CALCOCO2-211ENST00000508679 AKR1A1P14550 325 aa17.03■□□□□ 0.32
CALCOCO2-211ENST00000508679 KCNA2P16389 499 aa17.03■□□□□ 0.32
CALCOCO2-211ENST00000508679 MNX1P50219 401 aaPredicted RBP17.03■□□□□ 0.32
CALCOCO2-211ENST00000508679 IRX5P78411 483 aaPredicted RBP17.03■□□□□ 0.32
CALCOCO2-211ENST00000508679 SAFBQ15424 915 aaKnown RBP eCLIP17.03■□□□□ 0.32
CALCOCO2-211ENST00000508679 Q4G0T1 1027 aa17.03■□□□□ 0.32
CALCOCO2-211ENST00000508679 SEPT14Q6ZU15 432 aa17.03■□□□□ 0.32
CALCOCO2-211ENST00000508679 NEK8Q86SG6 692 aa17.03■□□□□ 0.32
CALCOCO2-211ENST00000508679 COPS5Q92905 334 aa17.03■□□□□ 0.32
CALCOCO2-211ENST00000508679 UPF3AQ9H1J1 476 aaKnown RBP17.03■□□□□ 0.32
CALCOCO2-211ENST00000508679 BRMS1Q9HCU9 246 aa17.03■□□□□ 0.32
CALCOCO2-211ENST00000508679 KCNH7Q9NS40 1196 aa17.03■□□□□ 0.32
CALCOCO2-211ENST00000508679 FAM184BQ9ULE4 1060 aa17.03■□□□□ 0.32
CALCOCO2-211ENST00000508679 TELO2Q9Y4R8 837 aa17.03■□□□□ 0.32
CALCOCO2-211ENST00000508679 MAFGO15525 162 aa17.02■□□□□ 0.32
CALCOCO2-211ENST00000508679 FIBPO43427 364 aa17.02■□□□□ 0.32
CALCOCO2-211ENST00000508679 SLC37A4O43826 429 aa17.02■□□□□ 0.32
CALCOCO2-211ENST00000508679 DUSP11O75319 330 aaKnown RBP17.02■□□□□ 0.32
CALCOCO2-211ENST00000508679 GJB1P08034 283 aa17.02■□□□□ 0.32
CALCOCO2-211ENST00000508679 TNFAIP2Q03169 654 aa17.02■□□□□ 0.32
CALCOCO2-211ENST00000508679 TCHHQ07283 1943 aa17.02■□□□□ 0.32
CALCOCO2-211ENST00000508679 ARHGAP1Q07960 439 aa17.02■□□□□ 0.32
CALCOCO2-211ENST00000508679 LY6KQ17RY6 165 aa17.02■□□□□ 0.32
CALCOCO2-211ENST00000508679 CCSAPQ6IQ19 270 aaPredicted RBP17.02■□□□□ 0.32
CALCOCO2-211ENST00000508679 ABHD8Q96I13 439 aa17.02■□□□□ 0.32
CALCOCO2-211ENST00000508679 SENP7Q9BQF6 1050 aa17.02■□□□□ 0.32
CALCOCO2-211ENST00000508679 OGDHLQ9ULD0 1010 aa17.02■□□□□ 0.32
CALCOCO2-211ENST00000508679 Q9Y3F1 56 aa17.02■□□□□ 0.32
CALCOCO2-211ENST00000508679 MKI67P46013 3256 aaKnown RBP17.02■□□□□ 0.31
CALCOCO2-211ENST00000508679 H3BQV1 296 aa17.02■□□□□ 0.31
CALCOCO2-211ENST00000508679 UBA1P22314 1058 aaKnown RBP17.02■□□□□ 0.31
CALCOCO2-211ENST00000508679 GJA9P57773 515 aa17.02■□□□□ 0.31
CALCOCO2-211ENST00000508679 ITGB3BPQ13352 177 aaPredicted RBP17.02■□□□□ 0.31
CALCOCO2-211ENST00000508679 IFFO2Q5TF58 517 aa17.02■□□□□ 0.31
CALCOCO2-211ENST00000508679 ANO1Q5XXA6 986 aa17.02■□□□□ 0.31
CALCOCO2-211ENST00000508679 B3GNT9Q6UX72 402 aa17.02■□□□□ 0.31
CALCOCO2-211ENST00000508679 C4orf32Q8N8J7 132 aa17.02■□□□□ 0.31
CALCOCO2-211ENST00000508679 KLHDC9Q8NEP7 349 aa17.02■□□□□ 0.31
CALCOCO2-211ENST00000508679 ETNPPLQ8TBG4 499 aa17.02■□□□□ 0.31
CALCOCO2-211ENST00000508679 EMID1Q96A84 441 aaPredicted RBP17.02■□□□□ 0.31
CALCOCO2-211ENST00000508679 RNF208Q9H0X6 261 aa17.02■□□□□ 0.31
CALCOCO2-211ENST00000508679 AGO4Q9HCK5 861 aaKnown RBP17.02■□□□□ 0.31
CALCOCO2-211ENST00000508679 KCNMB3Q9NPA1 279 aa17.02■□□□□ 0.31
CALCOCO2-211ENST00000508679 SYNRGQ9UMZ2 1314 aa17.01■□□□□ 0.31
CALCOCO2-211ENST00000508679 MYADML2A6NDP7 307 aa17.01■□□□□ 0.31
CALCOCO2-211ENST00000508679 MSH4O15457 936 aa17.01■□□□□ 0.31
CALCOCO2-211ENST00000508679 SGPL1O95470 568 aa17.01■□□□□ 0.31
CALCOCO2-211ENST00000508679 BRD1O95696 1058 aa17.01■□□□□ 0.31
CALCOCO2-211ENST00000508679 TXNP10599 105 aaKnown RBP17.01■□□□□ 0.31
CALCOCO2-211ENST00000508679 GJA8P48165 433 aa17.01■□□□□ 0.31
CALCOCO2-211ENST00000508679 MTMR1Q13613 665 aa17.01■□□□□ 0.31
CALCOCO2-211ENST00000508679 TTLL4Q14679 1199 aa17.01■□□□□ 0.31
CALCOCO2-211ENST00000508679 GNPTABQ3T906 1256 aa17.01■□□□□ 0.31
CALCOCO2-211ENST00000508679 MYSM1Q5VVJ2 828 aa17.01■□□□□ 0.31
CALCOCO2-211ENST00000508679 KCNV1Q6PIU1 500 aa17.01■□□□□ 0.31
CALCOCO2-211ENST00000508679 NLRX1Q86UT6 975 aa17.01■□□□□ 0.31
CALCOCO2-211ENST00000508679 HAS1Q92839 578 aa17.01■□□□□ 0.31
CALCOCO2-211ENST00000508679 DEFB118Q96PH6 123 aa17.01■□□□□ 0.31
CALCOCO2-211ENST00000508679 DNAH12Q6ZR08 3092 aa17■□□□□ 0.31
CALCOCO2-211ENST00000508679 SCN10AQ9Y5Y9 1956 aa17■□□□□ 0.31
CALCOCO2-211ENST00000508679 NFASCO94856 1347 aa17■□□□□ 0.31
CALCOCO2-211ENST00000508679 VPS37CA5D8V6 355 aaPredicted RBP17■□□□□ 0.31
CALCOCO2-211ENST00000508679 NKRFO15226 690 aaKnown RBP eCLIP17■□□□□ 0.31
CALCOCO2-211ENST00000508679 MSCO60682 206 aa17■□□□□ 0.31
CALCOCO2-211ENST00000508679 FARP2O94887 1054 aaPredicted RBP17■□□□□ 0.31
CALCOCO2-211ENST00000508679 MYCP01106 439 aaPredicted RBP17■□□□□ 0.31
CALCOCO2-211ENST00000508679 HOXD8P13378 290 aaPredicted RBP17■□□□□ 0.31
CALCOCO2-211ENST00000508679 GCFC2P16383 781 aaKnown RBP17■□□□□ 0.31
CALCOCO2-211ENST00000508679 TRAPPC10P48553 1259 aa17■□□□□ 0.31
CALCOCO2-211ENST00000508679 LETM2Q2VYF4 491 aa17■□□□□ 0.31
CALCOCO2-211ENST00000508679 PRR16Q569H4 304 aa17■□□□□ 0.31
CALCOCO2-211ENST00000508679 CELF3Q5SZQ8 465 aaKnown RBP17■□□□□ 0.31
CALCOCO2-211ENST00000508679 FERMT3Q86UX7 667 aa17■□□□□ 0.31
CALCOCO2-211ENST00000508679 PLA2G4DQ86XP0 818 aa17■□□□□ 0.31
CALCOCO2-211ENST00000508679 SLC5A5Q92911 643 aa17■□□□□ 0.31
CALCOCO2-211ENST00000508679 MTMR9Q96QG7 549 aa17■□□□□ 0.31
CALCOCO2-211ENST00000508679 EIF4ENIF1Q9NRA8 985 aaKnown RBP17■□□□□ 0.31
CALCOCO2-211ENST00000508679 MRVI1Q9Y6F6 885 aa17■□□□□ 0.31
CALCOCO2-211ENST00000508679 ZSCAN22P10073 491 aaPredicted RBP16.99■□□□□ 0.31
CALCOCO2-211ENST00000508679 PDIA4P13667 645 aaKnown RBP16.99■□□□□ 0.31
CALCOCO2-211ENST00000508679 CST5P28325 142 aaPredicted RBP16.99■□□□□ 0.31
CALCOCO2-211ENST00000508679 CNGA1P29973 690 aa16.99■□□□□ 0.31
CALCOCO2-211ENST00000508679 SETQ01105 290 aaPredicted RBP16.99■□□□□ 0.31
CALCOCO2-211ENST00000508679 NBR1Q14596 966 aa16.99■□□□□ 0.31
CALCOCO2-211ENST00000508679 FAM173BQ6P4H8 233 aa16.99■□□□□ 0.31
CALCOCO2-211ENST00000508679 BRAPQ7Z569 592 aa16.99■□□□□ 0.31
CALCOCO2-211ENST00000508679 U2AF1L4Q8WU68 220 aaKnown RBP16.99■□□□□ 0.31
CALCOCO2-211ENST00000508679 CDHR1Q96JP9 859 aa16.99■□□□□ 0.31
CALCOCO2-211ENST00000508679 TMEM60Q9H2L4 133 aa16.99■□□□□ 0.31
CALCOCO2-211ENST00000508679 PCDHB6Q9Y5E3 794 aa16.99■□□□□ 0.31
CALCOCO2-211ENST00000508679 A6NJR5 290 aa16.98■□□□□ 0.31
CALCOCO2-211ENST00000508679 PSMD10O75832 226 aa16.98■□□□□ 0.31
CALCOCO2-211ENST00000508679 HSP90AA1P07900 732 aaKnown RBP16.98■□□□□ 0.31
CALCOCO2-211ENST00000508679 HSDL1Q3SXM5 330 aa16.98■□□□□ 0.31
CALCOCO2-211ENST00000508679 MCTP1Q6DN14 999 aa16.98■□□□□ 0.31
CALCOCO2-211ENST00000508679 UBE2Q1Q7Z7E8 422 aa16.98■□□□□ 0.31
CALCOCO2-211ENST00000508679 TLK2Q86UE8 772 aa16.98■□□□□ 0.31
CALCOCO2-211ENST00000508679 POTEDQ86YR6 584 aa16.98■□□□□ 0.31
CALCOCO2-211ENST00000508679 GJA10Q969M2 543 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms