RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 KRTAP9-7A8MTY7 169 aa8.25□□□□□ -1.09
TOPBP1-206ENST00000508524 DGKIO75912 1065 aa8.25□□□□□ -1.09
TOPBP1-206ENST00000508524 IFRD2Q12894 506 aaPredicted RBP8.25□□□□□ -1.09
TOPBP1-206ENST00000508524 CHRNA2Q15822 529 aa8.25□□□□□ -1.09
TOPBP1-206ENST00000508524 LBX2Q6XYB7 198 aa8.25□□□□□ -1.09
TOPBP1-206ENST00000508524 LIPIQ6XZB0 460 aa8.25□□□□□ -1.09
TOPBP1-206ENST00000508524 SP8Q8IXZ3 490 aa8.25□□□□□ -1.09
TOPBP1-206ENST00000508524 LINC00482Q8N8I6 264 aa8.25□□□□□ -1.09
TOPBP1-206ENST00000508524 SYT8Q8NBV8 401 aa8.25□□□□□ -1.09
TOPBP1-206ENST00000508524 C20orf173Q96LM9 149 aa8.25□□□□□ -1.09
TOPBP1-206ENST00000508524 ASXL2Q76L83 1435 aa8.24□□□□□ -1.09
TOPBP1-206ENST00000508524 A0A0G2JLL6 359 aaPredicted RBP8.24□□□□□ -1.09
TOPBP1-206ENST00000508524 TCRBV5S2A0A599 114 aa8.24□□□□□ -1.09
TOPBP1-206ENST00000508524 FAM221BA6H8Z2 402 aa8.24□□□□□ -1.09
TOPBP1-206ENST00000508524 SLURP1P55000 103 aa8.24□□□□□ -1.09
TOPBP1-206ENST00000508524 FOXB2Q5VYV0 432 aa8.24□□□□□ -1.09
TOPBP1-206ENST00000508524 ARRDC4Q8NCT1 418 aa8.24□□□□□ -1.09
TOPBP1-206ENST00000508524 FEZF2Q8TBJ5 459 aa8.24□□□□□ -1.09
TOPBP1-206ENST00000508524 ZBTB8AQ96BR9 441 aa8.24□□□□□ -1.09
TOPBP1-206ENST00000508524 ZFYVE21Q9BQ24 234 aa8.24□□□□□ -1.09
TOPBP1-206ENST00000508524 JAM3Q9BX67 310 aa8.24□□□□□ -1.09
TOPBP1-206ENST00000508524 SPATA6Q9NWH7 488 aaPredicted RBP8.24□□□□□ -1.09
TOPBP1-206ENST00000508524 PCDHB4Q9Y5E5 795 aa8.24□□□□□ -1.09
TOPBP1-206ENST00000508524 OTOL1A6NHN0 477 aaPredicted RBP8.23□□□□□ -1.09
TOPBP1-206ENST00000508524 SASH1O94885 1247 aa8.23□□□□□ -1.09
TOPBP1-206ENST00000508524 STAT5AP42229 794 aa8.23□□□□□ -1.09
TOPBP1-206ENST00000508524 GPR85P60893 370 aa8.23□□□□□ -1.09
TOPBP1-206ENST00000508524 SF3A1Q15459 793 aaKnown RBP8.23□□□□□ -1.09
TOPBP1-206ENST00000508524 CR1LQ2VPA4 569 aa8.23□□□□□ -1.09
TOPBP1-206ENST00000508524 CD300LDQ6UXZ3 194 aa8.23□□□□□ -1.09
TOPBP1-206ENST00000508524 LRP10Q7Z4F1 713 aa8.23□□□□□ -1.09
TOPBP1-206ENST00000508524 ZBTB38Q8NAP3 1195 aaPredicted RBP8.23□□□□□ -1.09
TOPBP1-206ENST00000508524 DEPDC7Q96QD5 511 aa8.23□□□□□ -1.09
TOPBP1-206ENST00000508524 SNTG2Q9NY99 539 aa8.23□□□□□ -1.09
TOPBP1-206ENST00000508524 GRK2P25098 689 aa8.22□□□□□ -1.09
TOPBP1-206ENST00000508524 GRK3P35626 688 aa8.22□□□□□ -1.09
TOPBP1-206ENST00000508524 SMAD4Q13485 552 aaKnown RBP8.22□□□□□ -1.09
TOPBP1-206ENST00000508524 KIZQ2M2Z5 673 aa8.22□□□□□ -1.09
TOPBP1-206ENST00000508524 LILRA6Q6PI73 481 aa8.22□□□□□ -1.09
TOPBP1-206ENST00000508524 ZC3H18Q86VM9 953 aaKnown RBP8.22□□□□□ -1.09
TOPBP1-206ENST00000508524 SCUBE1Q8IWY4 988 aa8.22□□□□□ -1.09
TOPBP1-206ENST00000508524 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.22□□□□□ -1.09
TOPBP1-206ENST00000508524 PIP4K2CQ8TBX8 421 aa8.22□□□□□ -1.09
TOPBP1-206ENST00000508524 C11orf84Q9BUA3 381 aaPredicted RBP8.22□□□□□ -1.09
TOPBP1-206ENST00000508524 MYOTQ9UBF9 498 aa8.22□□□□□ -1.09
TOPBP1-206ENST00000508524 FAM153BP0C7A2 387 aa8.21□□□□□ -1.1
TOPBP1-206ENST00000508524 ITGA1P56199 1179 aa8.21□□□□□ -1.1
TOPBP1-206ENST00000508524 FAM209AQ5JX71 171 aa8.21□□□□□ -1.1
TOPBP1-206ENST00000508524 IFNL3Q8IZI9 196 aa8.21□□□□□ -1.1
TOPBP1-206ENST00000508524 PHOSPHO1Q8TCT1 267 aa8.21□□□□□ -1.1
TOPBP1-206ENST00000508524 EXOC2Q96KP1 924 aa8.21□□□□□ -1.1
TOPBP1-206ENST00000508524 SPATA25Q9BR10 227 aa8.21□□□□□ -1.1
TOPBP1-206ENST00000508524 SMOC1Q9H4F8 434 aa8.21□□□□□ -1.1
TOPBP1-206ENST00000508524 PCDH18Q9HCL0 1135 aa8.21□□□□□ -1.1
TOPBP1-206ENST00000508524 SLC6A20Q9NP91 592 aa8.21□□□□□ -1.1
TOPBP1-206ENST00000508524 TRAF6Q9Y4K3 522 aa8.21□□□□□ -1.1
TOPBP1-206ENST00000508524 TRBV23-1A0A0A0MS06 115 aa8.2□□□□□ -1.1
TOPBP1-206ENST00000508524 C6orf222P0C671 652 aaPredicted RBP8.2□□□□□ -1.1
TOPBP1-206ENST00000508524 CTSWP56202 376 aa8.2□□□□□ -1.1
TOPBP1-206ENST00000508524 CYP4F22Q6NT55 531 aa8.2□□□□□ -1.1
TOPBP1-206ENST00000508524 OTOP3Q7RTS5 596 aa8.2□□□□□ -1.1
TOPBP1-206ENST00000508524 CARFQ8N187 725 aa8.2□□□□□ -1.1
TOPBP1-206ENST00000508524 CDC6Q99741 560 aa8.2□□□□□ -1.1
TOPBP1-206ENST00000508524 YIPF4Q9BSR8 244 aa8.2□□□□□ -1.1
TOPBP1-206ENST00000508524 RTEL1Q9NZ71 1219 aa8.2□□□□□ -1.1
TOPBP1-206ENST00000508524 DTLQ9NZJ0 730 aa8.2□□□□□ -1.1
TOPBP1-206ENST00000508524 KDM2BQ8NHM5 1336 aa8.2□□□□□ -1.1
TOPBP1-206ENST00000508524 KRIT1O00522 736 aa8.19□□□□□ -1.1
TOPBP1-206ENST00000508524 THBS2P35442 1172 aa8.19□□□□□ -1.1
TOPBP1-206ENST00000508524 KCNC1P48547 511 aa8.19□□□□□ -1.1
TOPBP1-206ENST00000508524 SUMO1P63165 101 aaKnown RBP8.19□□□□□ -1.1
TOPBP1-206ENST00000508524 HABP4Q5JVS0 413 aaKnown RBP8.19□□□□□ -1.1
TOPBP1-206ENST00000508524 DPH6Q7L8W6 267 aa8.19□□□□□ -1.1
TOPBP1-206ENST00000508524 STK32CQ86UX6 486 aa8.19□□□□□ -1.1
TOPBP1-206ENST00000508524 KYQ8NBH2 561 aa8.19□□□□□ -1.1
TOPBP1-206ENST00000508524 TOE1Q96GM8 510 aaKnown RBP8.19□□□□□ -1.1
TOPBP1-206ENST00000508524 NGRNQ9NPE2 291 aaKnown RBP8.19□□□□□ -1.1
TOPBP1-206ENST00000508524 ASH2LQ9UBL3 628 aa8.19□□□□□ -1.1
TOPBP1-206ENST00000508524 MAFKO60675 156 aa8.18□□□□□ -1.1
TOPBP1-206ENST00000508524 LRG1P02750 347 aa8.18□□□□□ -1.1
TOPBP1-206ENST00000508524 SOD2P04179 222 aa8.18□□□□□ -1.1
TOPBP1-206ENST00000508524 NKX3-2P78367 333 aa8.18□□□□□ -1.1
TOPBP1-206ENST00000508524 LONRF2Q1L5Z9 754 aa8.18□□□□□ -1.1
TOPBP1-206ENST00000508524 TEPPQ6URK8 271 aa8.18□□□□□ -1.1
TOPBP1-206ENST00000508524 ZDHHC14Q8IZN3 488 aa8.18□□□□□ -1.1
TOPBP1-206ENST00000508524 SREK1Q8WXA9 508 aaKnown RBP8.18□□□□□ -1.1
TOPBP1-206ENST00000508524 MKL1Q969V6 931 aa8.18□□□□□ -1.1
TOPBP1-206ENST00000508524 SRPK1Q96SB4 655 aaKnown RBP8.18□□□□□ -1.1
TOPBP1-206ENST00000508524 KCNJ15Q99712 375 aa8.18□□□□□ -1.1
TOPBP1-206ENST00000508524 NTMQ9P121 344 aa8.18□□□□□ -1.1
TOPBP1-206ENST00000508524 SLC27A2O14975 620 aa8.17□□□□□ -1.1
TOPBP1-206ENST00000508524 COL6A2P12110 1019 aa8.17□□□□□ -1.1
TOPBP1-206ENST00000508524 SARSP49591 514 aaKnown RBP8.17□□□□□ -1.1
TOPBP1-206ENST00000508524 ADAM9Q13443 819 aa8.17□□□□□ -1.1
TOPBP1-206ENST00000508524 SOGA3Q5TF21 947 aa8.17□□□□□ -1.1
TOPBP1-206ENST00000508524 MAMDC2Q7Z304 686 aaPredicted RBP8.17□□□□□ -1.1
TOPBP1-206ENST00000508524 TTLL11Q8NHH1 800 aa8.17□□□□□ -1.1
TOPBP1-206ENST00000508524 UHMK1Q8TAS1 419 aaKnown RBP8.17□□□□□ -1.1
TOPBP1-206ENST00000508524 PMFBP1Q8TBY8 1022 aa8.17□□□□□ -1.1
TOPBP1-206ENST00000508524 PTPRN2Q92932 1015 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms