RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 FPGSQ05932 587 aa10.77□□□□□ -0.69
DDX41-209ENST00000508279 FUT2Q10981 343 aa10.77□□□□□ -0.69
DDX41-209ENST00000508279 LAMC2Q13753 1193 aa10.77□□□□□ -0.69
DDX41-209ENST00000508279 TOB2Q14106 344 aaPredicted RBP10.77□□□□□ -0.69
DDX41-209ENST00000508279 SHHQ15465 462 aa10.77□□□□□ -0.69
DDX41-209ENST00000508279 DGKDQ16760 1214 aa10.77□□□□□ -0.69
DDX41-209ENST00000508279 C9orf50Q5SZB4 431 aa10.77□□□□□ -0.69
DDX41-209ENST00000508279 CELF3Q5SZQ8 465 aaKnown RBP10.77□□□□□ -0.69
DDX41-209ENST00000508279 TYW1BQ6NUM6 668 aa10.77□□□□□ -0.69
DDX41-209ENST00000508279 KCNV1Q6PIU1 500 aa10.77□□□□□ -0.69
DDX41-209ENST00000508279 SLC26A6Q9BXS9 759 aa10.77□□□□□ -0.69
DDX41-209ENST00000508279 ALDH8A1Q9H2A2 487 aaPredicted RBP10.77□□□□□ -0.69
DDX41-209ENST00000508279 HIPK3Q9H422 1215 aa10.77□□□□□ -0.69
DDX41-209ENST00000508279 EHMT1Q9H9B1 1298 aa10.77□□□□□ -0.69
DDX41-209ENST00000508279 TBX21Q9UL17 535 aa10.77□□□□□ -0.69
DDX41-209ENST00000508279 PCDHA6Q9UN73 950 aa10.77□□□□□ -0.69
DDX41-209ENST00000508279 NOD1Q9Y239 953 aa10.77□□□□□ -0.69
DDX41-209ENST00000508279 PCDHA8Q9Y5H6 950 aa10.77□□□□□ -0.69
DDX41-209ENST00000508279 SCN5AQ14524 2016 aa10.76□□□□□ -0.69
DDX41-209ENST00000508279 NOP56O00567 594 aaKnown RBP10.76□□□□□ -0.69
DDX41-209ENST00000508279 CD4P01730 458 aa10.76□□□□□ -0.69
DDX41-209ENST00000508279 ACRP10323 421 aa10.76□□□□□ -0.69
DDX41-209ENST00000508279 CYP2C9P11712 490 aa10.76□□□□□ -0.69
DDX41-209ENST00000508279 SCG2P13521 617 aa10.76□□□□□ -0.69
DDX41-209ENST00000508279 PDIA3P30101 505 aaKnown RBP10.76□□□□□ -0.69
DDX41-209ENST00000508279 RCAN1P53805 252 aa10.76□□□□□ -0.69
DDX41-209ENST00000508279 PCNX4Q63HM2 1172 aa10.76□□□□□ -0.69
DDX41-209ENST00000508279 CYFIP1Q7L576 1253 aa10.76□□□□□ -0.69
DDX41-209ENST00000508279 NLRX1Q86UT6 975 aa10.76□□□□□ -0.69
DDX41-209ENST00000508279 SLC43A3Q8NBI5 491 aa10.76□□□□□ -0.69
DDX41-209ENST00000508279 BCAS3Q9H6U6 928 aa10.76□□□□□ -0.69
DDX41-209ENST00000508279 TMEM260Q9NX78 707 aa10.76□□□□□ -0.69
DDX41-209ENST00000508279 BARHL2Q9NY43 387 aa10.76□□□□□ -0.69
DDX41-209ENST00000508279 FRMPD4Q14CM0 1322 aa10.76□□□□□ -0.69
DDX41-209ENST00000508279 UMODL1Q5DID0 1318 aa10.76□□□□□ -0.69
DDX41-209ENST00000508279 CPLX1O14810 134 aa10.75□□□□□ -0.69
DDX41-209ENST00000508279 FIBPO43427 364 aa10.75□□□□□ -0.69
DDX41-209ENST00000508279 STAM2O75886 525 aa10.75□□□□□ -0.69
DDX41-209ENST00000508279 SLC34A2O95436 690 aa10.75□□□□□ -0.69
DDX41-209ENST00000508279 TGFB3P10600 412 aa10.75□□□□□ -0.69
DDX41-209ENST00000508279 CSF2RAP15509 400 aa10.75□□□□□ -0.69
DDX41-209ENST00000508279 PSEN2P49810 448 aa10.75□□□□□ -0.69
DDX41-209ENST00000508279 EPHB4P54760 987 aa10.75□□□□□ -0.69
DDX41-209ENST00000508279 SEMA3FQ13275 785 aa10.75□□□□□ -0.69
DDX41-209ENST00000508279 PFKFB3Q16875 520 aaPredicted RBP10.75□□□□□ -0.69
DDX41-209ENST00000508279 HSDL1Q3SXM5 330 aa10.75□□□□□ -0.69
DDX41-209ENST00000508279 UTP14CQ5TAP6 766 aaKnown RBP10.75□□□□□ -0.69
DDX41-209ENST00000508279 MYSM1Q5VVJ2 828 aa10.75□□□□□ -0.69
DDX41-209ENST00000508279 JAKMIP3Q5VZ66 844 aa10.75□□□□□ -0.69
DDX41-209ENST00000508279 MFSD5Q6N075 450 aa10.75□□□□□ -0.69
DDX41-209ENST00000508279 PPP1R18Q6NYC8 613 aa10.75□□□□□ -0.69
DDX41-209ENST00000508279 TMEM199Q8N511 208 aa10.75□□□□□ -0.69
DDX41-209ENST00000508279 PPTC7Q8NI37 304 aa10.75□□□□□ -0.69
DDX41-209ENST00000508279 RNPC3Q96LT9 517 aaKnown RBP10.75□□□□□ -0.69
DDX41-209ENST00000508279 INPP4AQ96PE3 977 aaPredicted RBP10.75□□□□□ -0.69
DDX41-209ENST00000508279 ANO3Q9BYT9 981 aa10.75□□□□□ -0.69
DDX41-209ENST00000508279 AGXT2Q9BYV1 514 aa10.75□□□□□ -0.69
DDX41-209ENST00000508279 TM6SF1Q9BZW5 370 aa10.75□□□□□ -0.69
DDX41-209ENST00000508279 RIC8AQ9NPQ8 531 aa10.75□□□□□ -0.69
DDX41-209ENST00000508279 SPATA31C2B4DYI2 1134 aa10.74□□□□□ -0.69
DDX41-209ENST00000508279 hCG_1984214I3L0E3 225 aa10.74□□□□□ -0.69
DDX41-209ENST00000508279 PRPF3O43395 683 aaKnown RBP10.74□□□□□ -0.69
DDX41-209ENST00000508279 DTNBO60941 627 aa10.74□□□□□ -0.69
DDX41-209ENST00000508279 SEC24BO95487 1268 aa10.74□□□□□ -0.69
DDX41-209ENST00000508279 SUPT20HL2P0C7V6 817 aa10.74□□□□□ -0.69
DDX41-209ENST00000508279 ZNF76P36508 570 aa10.74□□□□□ -0.69
DDX41-209ENST00000508279 SSRP1Q08945 709 aaKnown RBP10.74□□□□□ -0.69
DDX41-209ENST00000508279 PPIGQ13427 754 aaKnown RBP eCLIP10.74□□□□□ -0.692e-8■■□□□ 14.4
DDX41-209ENST00000508279 NEDD9Q14511 834 aa10.74□□□□□ -0.69
DDX41-209ENST00000508279 MFSD10Q14728 455 aa10.74□□□□□ -0.69
DDX41-209ENST00000508279 PTGISQ16647 500 aa10.74□□□□□ -0.69
DDX41-209ENST00000508279 KIAA0753Q2KHM9 967 aa10.74□□□□□ -0.69
DDX41-209ENST00000508279 XRRA1Q6P2D8 792 aa10.74□□□□□ -0.69
DDX41-209ENST00000508279 NFRKBQ6P4R8 1299 aa10.74□□□□□ -0.69
DDX41-209ENST00000508279 TRIM22Q8IYM9 498 aa10.74□□□□□ -0.69
DDX41-209ENST00000508279 FBXL16Q8N461 479 aa10.74□□□□□ -0.69
DDX41-209ENST00000508279 ZNF713Q8N859 430 aaPredicted RBP10.74□□□□□ -0.69
DDX41-209ENST00000508279 C7orf31Q8N865 590 aa10.74□□□□□ -0.69
DDX41-209ENST00000508279 KAT2BQ92831 832 aa10.74□□□□□ -0.69
DDX41-209ENST00000508279 EMID1Q96A84 441 aaPredicted RBP10.74□□□□□ -0.69
DDX41-209ENST00000508279 SCLYQ96I15 445 aa10.74□□□□□ -0.69
DDX41-209ENST00000508279 KATNAL1Q9BW62 490 aa10.74□□□□□ -0.69
DDX41-209ENST00000508279 SEZ6LQ9BYH1 1024 aa10.74□□□□□ -0.69
DDX41-209ENST00000508279 VPS54Q9P1Q0 977 aa10.74□□□□□ -0.69
DDX41-209ENST00000508279 HDAC6Q9UBN7 1215 aa10.74□□□□□ -0.69
DDX41-209ENST00000508279 ATP9AO75110 1047 aa10.73□□□□□ -0.69
DDX41-209ENST00000508279 FOSP01100 380 aaPredicted RBP10.73□□□□□ -0.69
DDX41-209ENST00000508279 ITGB5P18084 799 aa10.73□□□□□ -0.69
DDX41-209ENST00000508279 ICAM3P32942 547 aa10.73□□□□□ -0.69
DDX41-209ENST00000508279 MTMR1Q13613 665 aa10.73□□□□□ -0.69
DDX41-209ENST00000508279 NTRK3Q16288 839 aa10.73□□□□□ -0.69
DDX41-209ENST00000508279 PKN1Q16512 942 aa10.73□□□□□ -0.69
DDX41-209ENST00000508279 LRIT3Q3SXY7 679 aa10.73□□□□□ -0.69
DDX41-209ENST00000508279 GDF6Q6KF10 455 aaPredicted RBP10.73□□□□□ -0.69
DDX41-209ENST00000508279 CPLX2Q6PUV4 134 aaKnown RBP10.73□□□□□ -0.69
DDX41-209ENST00000508279 METTL7BQ6UX53 244 aa10.73□□□□□ -0.69
DDX41-209ENST00000508279 DEFB128Q7Z7B8 93 aa10.73□□□□□ -0.69
DDX41-209ENST00000508279 CCDC12Q8WUD4 166 aaPredicted RBP10.73□□□□□ -0.69
DDX41-209ENST00000508279 UIMC1Q96RL1 719 aa10.73□□□□□ -0.69
DDX41-209ENST00000508279 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.73□□□□□ -0.694e-9■■□□□ 14.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms