RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 TRIM67Q6ZTA4 783 aa16.33■□□□□ 0.2
DDR1-260ENST00000507533 SUGP1Q8IWZ8 645 aaKnown RBP16.33■□□□□ 0.2
DDR1-260ENST00000507533 DHX37Q8IY37 1157 aaKnown RBP16.33■□□□□ 0.2
DDR1-260ENST00000507533 C5orf42Q9H799 3197 aa16.32■□□□□ 0.2
DDR1-260ENST00000507533 F2P00734 622 aa16.32■□□□□ 0.2
DDR1-260ENST00000507533 MS4A1P11836 297 aa16.32■□□□□ 0.2
DDR1-260ENST00000507533 FOXK2Q01167 660 aa16.32■□□□□ 0.2
DDR1-260ENST00000507533 HYAL1Q12794 435 aa16.32■□□□□ 0.2
DDR1-260ENST00000507533 SMAD4Q13485 552 aaKnown RBP16.32■□□□□ 0.2
DDR1-260ENST00000507533 HIC1Q14526 733 aa16.32■□□□□ 0.2
DDR1-260ENST00000507533 RGS22Q8NE09 1264 aa16.32■□□□□ 0.2
DDR1-260ENST00000507533 WDR19Q8NEZ3 1342 aa16.32■□□□□ 0.2
DDR1-260ENST00000507533 GPATCH3Q96I76 525 aa16.32■□□□□ 0.2
DDR1-260ENST00000507533 TMEM47Q9BQJ4 181 aa16.32■□□□□ 0.2
DDR1-260ENST00000507533 DDX41Q9UJV9 622 aaKnown RBP16.32■□□□□ 0.2
DDR1-260ENST00000507533 CFAP54Q96N23 3096 aa16.32■□□□□ 0.2
DDR1-260ENST00000507533 TOP1P11387 765 aaKnown RBP16.31■□□□□ 0.2
DDR1-260ENST00000507533 CTNNB1P35222 781 aa16.31■□□□□ 0.2
DDR1-260ENST00000507533 LAMC2Q13753 1193 aa16.31■□□□□ 0.2
DDR1-260ENST00000507533 STXBP2Q15833 593 aa16.31■□□□□ 0.2
DDR1-260ENST00000507533 USH1GQ495M9 461 aa16.31■□□□□ 0.2
DDR1-260ENST00000507533 SEPT8Q92599 483 aa16.31■□□□□ 0.2
DDR1-260ENST00000507533 EMID1Q96A84 441 aaPredicted RBP16.31■□□□□ 0.2
DDR1-260ENST00000507533 TAAR1Q96RJ0 339 aa16.31■□□□□ 0.2
DDR1-260ENST00000507533 IGFLR1Q9H665 355 aa16.31■□□□□ 0.2
DDR1-260ENST00000507533 FAM86C1Q9NVL1 165 aa16.31■□□□□ 0.2
DDR1-260ENST00000507533 DDX19BQ9UMR2 479 aa16.31■□□□□ 0.2
DDR1-260ENST00000507533 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.3■□□□□ 0.2
DDR1-260ENST00000507533 SERINC5Q86VE9 423 aa16.3■□□□□ 0.2
DDR1-260ENST00000507533 FIBCD1Q8N539 461 aa16.3■□□□□ 0.2
DDR1-260ENST00000507533 PPTC7Q8NI37 304 aa16.3■□□□□ 0.2
DDR1-260ENST00000507533 NSUN6Q8TEA1 469 aaKnown RBP16.3■□□□□ 0.2
DDR1-260ENST00000507533 TBC1D5Q92609 795 aa16.3■□□□□ 0.2
DDR1-260ENST00000507533 IWS1Q96ST2 819 aa16.3■□□□□ 0.2
DDR1-260ENST00000507533 IFIH1Q9BYX4 1025 aaKnown RBP16.3■□□□□ 0.2
DDR1-260ENST00000507533 LMAN2LQ9H0V9 348 aa16.3■□□□□ 0.2
DDR1-260ENST00000507533 CD207Q9UJ71 328 aa16.3■□□□□ 0.2
DDR1-260ENST00000507533 TECTAO75443 2155 aa16.29■□□□□ 0.2
DDR1-260ENST00000507533 GRM6O15303 877 aa16.29■□□□□ 0.2
DDR1-260ENST00000507533 TBX10O75333 385 aa16.29■□□□□ 0.2
DDR1-260ENST00000507533 RB1P06400 928 aa16.29■□□□□ 0.2
DDR1-260ENST00000507533 PDHBP11177 359 aa16.29■□□□□ 0.2
DDR1-260ENST00000507533 GTF2F1P35269 517 aaKnown RBP eCLIP16.29■□□□□ 0.2
DDR1-260ENST00000507533 ZXDAP98168 799 aa16.29■□□□□ 0.2
DDR1-260ENST00000507533 FBXL6Q8N531 539 aa16.29■□□□□ 0.2
DDR1-260ENST00000507533 SYTL5Q8TDW5 730 aaPredicted RBP16.29■□□□□ 0.2
DDR1-260ENST00000507533 IL17RAQ96F46 866 aa16.29■□□□□ 0.2
DDR1-260ENST00000507533 C11orf84Q9BUA3 381 aaPredicted RBP16.29■□□□□ 0.2
DDR1-260ENST00000507533 MRVI1Q9Y6F6 885 aa16.29■□□□□ 0.2
DDR1-260ENST00000507533 C5orf67F2Z3F1 127 aa16.28■□□□□ 0.2
DDR1-260ENST00000507533 LINC01565O15544 149 aa16.28■□□□□ 0.2
DDR1-260ENST00000507533 ORC4O43929 436 aa16.28■□□□□ 0.2
DDR1-260ENST00000507533 BMPR1AP36894 532 aa16.28■□□□□ 0.2
DDR1-260ENST00000507533 ZNF543Q08ER8 600 aa16.28■□□□□ 0.2
DDR1-260ENST00000507533 ZMYM1Q5SVZ6 1142 aa16.28■□□□□ 0.2
DDR1-260ENST00000507533 RMDN3Q96TC7 470 aa16.28■□□□□ 0.2
DDR1-260ENST00000507533 OSBPL7Q9BZF2 842 aa16.28■□□□□ 0.2
DDR1-260ENST00000507533 MAF1Q9H063 256 aa16.28■□□□□ 0.2
DDR1-260ENST00000507533 TOMM22Q9NS69 142 aa16.28■□□□□ 0.2
DDR1-260ENST00000507533 COL20A1Q9P218 1284 aa16.28■□□□□ 0.2
DDR1-260ENST00000507533 ANAPC4Q9UJX5 808 aa16.28■□□□□ 0.2
DDR1-260ENST00000507533 ZFHX2Q9C0A1 2572 aaPredicted RBP16.28■□□□□ 0.2
DDR1-260ENST00000507533 C17orf102A2RUQ5 167 aa16.27■□□□□ 0.2
DDR1-260ENST00000507533 FOXP2O15409 715 aa16.27■□□□□ 0.2
DDR1-260ENST00000507533 PPFIA4O75335 1185 aa16.27■□□□□ 0.2
DDR1-260ENST00000507533 EIF3JO75822 258 aaKnown RBP16.27■□□□□ 0.2
DDR1-260ENST00000507533 CSPG5O95196 566 aa16.27■□□□□ 0.2
DDR1-260ENST00000507533 ADAM15Q13444 863 aa16.27■□□□□ 0.2
DDR1-260ENST00000507533 RRP12Q5JTH9 1297 aaKnown RBP16.27■□□□□ 0.2
DDR1-260ENST00000507533 ARHGEF16Q5VV41 709 aa16.27■□□□□ 0.2
DDR1-260ENST00000507533 ATOH1Q92858 354 aaPredicted RBP16.27■□□□□ 0.2
DDR1-260ENST00000507533 ATP6V0A1Q93050 837 aa16.27■□□□□ 0.2
DDR1-260ENST00000507533 IRF2BPLQ9H1B7 796 aa16.27■□□□□ 0.2
DDR1-260ENST00000507533 ALG13Q9NP73 1137 aaKnown RBP16.27■□□□□ 0.2
DDR1-260ENST00000507533 MICAL3Q7RTP6 2002 aa16.27■□□□□ 0.2
DDR1-260ENST00000507533 COL4A6Q14031 1691 aa16.27■□□□□ 0.19
DDR1-260ENST00000507533 LOC730098B7Z3J9 87 aa16.26■□□□□ 0.19
DDR1-260ENST00000507533 SORBS3O60504 671 aa16.26■□□□□ 0.19
DDR1-260ENST00000507533 CTSHP09668 335 aa16.26■□□□□ 0.19
DDR1-260ENST00000507533 FGRP09769 529 aa16.26■□□□□ 0.19
DDR1-260ENST00000507533 HOXD8P13378 290 aaPredicted RBP16.26■□□□□ 0.19
DDR1-260ENST00000507533 EIF2AK2P19525 551 aaKnown RBP16.26■□□□□ 0.19
DDR1-260ENST00000507533 NDUFV1P49821 464 aa16.26■□□□□ 0.19
DDR1-260ENST00000507533 FSD1Q9BTV5 496 aa16.26■□□□□ 0.19
DDR1-260ENST00000507533 CHMP4BQ9H444 224 aaKnown RBP16.26■□□□□ 0.19
DDR1-260ENST00000507533 TCP11L1Q9NUJ3 509 aa16.26■□□□□ 0.19
DDR1-260ENST00000507533 RWDD3Q9Y3V2 267 aa16.26■□□□□ 0.19
DDR1-260ENST00000507533 ABCB11O95342 1321 aa16.25■□□□□ 0.19
DDR1-260ENST00000507533 EYA4O95677 639 aa16.25■□□□□ 0.19
DDR1-260ENST00000507533 LINC00271P0C7V0 271 aa16.25■□□□□ 0.19
DDR1-260ENST00000507533 SNHG28P0DPA3 235 aa16.25■□□□□ 0.19
DDR1-260ENST00000507533 HSDL1Q3SXM5 330 aa16.25■□□□□ 0.19
DDR1-260ENST00000507533 MYSM1Q5VVJ2 828 aa16.25■□□□□ 0.19
DDR1-260ENST00000507533 MCF2L2Q86YR7 1114 aa16.25■□□□□ 0.19
DDR1-260ENST00000507533 APBB2Q92870 758 aa16.25■□□□□ 0.19
DDR1-260ENST00000507533 MSLNLQ96KJ4 702 aa16.25■□□□□ 0.19
DDR1-260ENST00000507533 SPATA33Q96N06 139 aa16.25■□□□□ 0.19
DDR1-260ENST00000507533 UBA5Q9GZZ9 404 aa16.25■□□□□ 0.19
DDR1-260ENST00000507533 CPVLQ9H3G5 476 aa16.25■□□□□ 0.19
DDR1-260ENST00000507533 TREHO43280 583 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms