RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 MTMR9Q96QG7 549 aa16.08■□□□□ 0.16
RNF4-208ENST00000507247 KATNBL1Q9H079 304 aa16.08■□□□□ 0.16
RNF4-208ENST00000507247 KCNMB3Q9NPA1 279 aa16.08■□□□□ 0.16
RNF4-208ENST00000507247 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.08■□□□□ 0.16
RNF4-208ENST00000507247 RCOR1Q9UKL0 485 aa16.08■□□□□ 0.16
RNF4-208ENST00000507247 SYNGAP1Q96PV0 1343 aa16.08■□□□□ 0.16
RNF4-208ENST00000507247 SPTLC2O15270 562 aa16.07■□□□□ 0.16
RNF4-208ENST00000507247 MSH4O15457 936 aa16.07■□□□□ 0.16
RNF4-208ENST00000507247 BMP15O95972 392 aa16.07■□□□□ 0.16
RNF4-208ENST00000507247 GNRH1P01148 92 aa16.07■□□□□ 0.16
RNF4-208ENST00000507247 OR52Z1P0C646 297 aa16.07■□□□□ 0.16
RNF4-208ENST00000507247 HOXD10P28358 340 aa16.07■□□□□ 0.16
RNF4-208ENST00000507247 MARCKSP29966 332 aaPredicted RBP16.07■□□□□ 0.16
RNF4-208ENST00000507247 SETQ01105 290 aaPredicted RBP16.07■□□□□ 0.16
RNF4-208ENST00000507247 MTMR1Q13613 665 aa16.07■□□□□ 0.16
RNF4-208ENST00000507247 CALCRLQ16602 461 aa16.07■□□□□ 0.16
RNF4-208ENST00000507247 SEPT14Q6ZU15 432 aa16.07■□□□□ 0.16
RNF4-208ENST00000507247 OTOP1Q7RTM1 612 aa16.07■□□□□ 0.16
RNF4-208ENST00000507247 NLRX1Q86UT6 975 aa16.07■□□□□ 0.16
RNF4-208ENST00000507247 TRIB2Q92519 343 aa16.07■□□□□ 0.16
RNF4-208ENST00000507247 GPRASP2Q96D09 838 aa16.07■□□□□ 0.16
RNF4-208ENST00000507247 SPATA32Q96LK8 384 aa16.07■□□□□ 0.16
RNF4-208ENST00000507247 MCOLN1Q9GZU1 580 aa16.07■□□□□ 0.16
RNF4-208ENST00000507247 KCNH7Q9NS40 1196 aa16.07■□□□□ 0.16
RNF4-208ENST00000507247 CEP131Q9UPN4 1083 aa16.07■□□□□ 0.16
RNF4-208ENST00000507247 MORC2Q9Y6X9 1032 aaPredicted RBP16.07■□□□□ 0.16
RNF4-208ENST00000507247 ICAM3P32942 547 aa16.06■□□□□ 0.16
RNF4-208ENST00000507247 CYP2C19P33261 490 aa16.06■□□□□ 0.16
RNF4-208ENST00000507247 GRIN1Q05586 938 aa16.06■□□□□ 0.16
RNF4-208ENST00000507247 IRF5Q13568 498 aa16.06■□□□□ 0.16
RNF4-208ENST00000507247 IL17AQ16552 155 aa16.06■□□□□ 0.16
RNF4-208ENST00000507247 SCAND2PQ9GZW5 306 aaPredicted RBP16.06■□□□□ 0.16
RNF4-208ENST00000507247 AGO4Q9HCK5 861 aaKnown RBP16.06■□□□□ 0.16
RNF4-208ENST00000507247 PDGFCQ9NRA1 345 aa16.06■□□□□ 0.16
RNF4-208ENST00000507247 PKD2L1Q9P0L9 805 aa16.06■□□□□ 0.16
RNF4-208ENST00000507247 FBXO2Q9UK22 296 aaPredicted RBP16.06■□□□□ 0.16
RNF4-208ENST00000507247 TRIM17Q9Y577 477 aa16.06■□□□□ 0.16
RNF4-208ENST00000507247 SPATA31C2B4DYI2 1134 aa16.05■□□□□ 0.16
RNF4-208ENST00000507247 LAD1O00515 517 aa16.05■□□□□ 0.16
RNF4-208ENST00000507247 TBX3O15119 743 aa16.05■□□□□ 0.16
RNF4-208ENST00000507247 ATP9AO75110 1047 aa16.05■□□□□ 0.16
RNF4-208ENST00000507247 PPP6R2O75170 966 aa16.05■□□□□ 0.16
RNF4-208ENST00000507247 ARHGEF6Q15052 776 aa16.05■□□□□ 0.16
RNF4-208ENST00000507247 GNPTABQ3T906 1256 aa16.05■□□□□ 0.16
RNF4-208ENST00000507247 PRAMEF19Q5SWL8 479 aa16.05■□□□□ 0.16
RNF4-208ENST00000507247 TAPT1Q6NXT6 567 aa16.05■□□□□ 0.16
RNF4-208ENST00000507247 SLC5A5Q92911 643 aa16.05■□□□□ 0.16
RNF4-208ENST00000507247 GBP4Q96PP9 640 aa16.05■□□□□ 0.16
RNF4-208ENST00000507247 VTA1Q9NP79 307 aa16.05■□□□□ 0.16
RNF4-208ENST00000507247 WDR81Q562E7 1941 aa16.04■□□□□ 0.16
RNF4-208ENST00000507247 CCDC85CA6NKD9 419 aa16.04■□□□□ 0.16
RNF4-208ENST00000507247 ARIH2O95376 493 aa16.04■□□□□ 0.16
RNF4-208ENST00000507247 ELNP15502 786 aa16.04■□□□□ 0.16
RNF4-208ENST00000507247 KCNA2P16389 499 aa16.04■□□□□ 0.16
RNF4-208ENST00000507247 PRPHP41219 470 aa16.04■□□□□ 0.16
RNF4-208ENST00000507247 TXKP42681 527 aa16.04■□□□□ 0.16
RNF4-208ENST00000507247 SP2Q02086 613 aa16.04■□□□□ 0.16
RNF4-208ENST00000507247 TRIM32Q13049 653 aa16.04■□□□□ 0.16
RNF4-208ENST00000507247 ITGB3BPQ13352 177 aaPredicted RBP16.04■□□□□ 0.16
RNF4-208ENST00000507247 ACVR2BQ13705 512 aa16.04■□□□□ 0.16
RNF4-208ENST00000507247 TMEM63BQ5T3F8 832 aa16.04■□□□□ 0.16
RNF4-208ENST00000507247 ARL6IP4Q66PJ3 421 aaKnown RBP16.04■□□□□ 0.16
RNF4-208ENST00000507247 TMEM87AQ8NBN3 555 aa16.04■□□□□ 0.16
RNF4-208ENST00000507247 KCNG4Q8TDN1 519 aa16.04■□□□□ 0.16
RNF4-208ENST00000507247 CLIC6Q96NY7 704 aa16.04■□□□□ 0.16
RNF4-208ENST00000507247 ZNF577Q9BSK1 485 aa16.04■□□□□ 0.16
RNF4-208ENST00000507247 ABHD16BQ9H3Z7 469 aa16.04■□□□□ 0.16
RNF4-208ENST00000507247 BCAS3Q9H6U6 928 aa16.04■□□□□ 0.16
RNF4-208ENST00000507247 ZHX1Q9UKY1 873 aaPredicted RBP16.04■□□□□ 0.16
RNF4-208ENST00000507247 PCDHA7Q9UN72 937 aa16.04■□□□□ 0.16
RNF4-208ENST00000507247 ELP1O95163 1332 aa16.03■□□□□ 0.16
RNF4-208ENST00000507247 RBM47A0AV96 593 aaKnown RBP16.03■□□□□ 0.16
RNF4-208ENST00000507247 VWA3AA6NCI4 1184 aa16.03■□□□□ 0.16
RNF4-208ENST00000507247 IPO5O00410 1097 aaKnown RBP16.03■□□□□ 0.16
RNF4-208ENST00000507247 MAFGO15525 162 aa16.03■□□□□ 0.16
RNF4-208ENST00000507247 DHX15O43143 795 aaKnown RBP16.03■□□□□ 0.16
RNF4-208ENST00000507247 ADCY3O60266 1144 aa16.03■□□□□ 0.16
RNF4-208ENST00000507247 PSMD10O75832 226 aa16.03■□□□□ 0.16
RNF4-208ENST00000507247 ZNF865P0CJ78 1059 aaPredicted RBP16.03■□□□□ 0.16
RNF4-208ENST00000507247 PRMT2P55345 433 aa16.03■□□□□ 0.16
RNF4-208ENST00000507247 AXDND1Q5T1B0 1012 aaPredicted RBP16.03■□□□□ 0.16
RNF4-208ENST00000507247 CCDC62Q6P9F0 684 aa16.03■□□□□ 0.16
RNF4-208ENST00000507247 TRMT44Q8IYL2 757 aaKnown RBP16.03■□□□□ 0.16
RNF4-208ENST00000507247 SLFN12Q8IYM2 578 aa16.03■□□□□ 0.16
RNF4-208ENST00000507247 TRPV1Q8NER1 839 aa16.03■□□□□ 0.16
RNF4-208ENST00000507247 RAET1EQ8TD07 263 aa16.03■□□□□ 0.16
RNF4-208ENST00000507247 CDHR1Q96JP9 859 aa16.03■□□□□ 0.16
RNF4-208ENST00000507247 FAM20AQ96MK3 541 aa16.03■□□□□ 0.16
RNF4-208ENST00000507247 TTC12Q9H892 705 aaPredicted RBP16.03■□□□□ 0.16
RNF4-208ENST00000507247 SRPRBQ9Y5M8 271 aaKnown RBP16.03■□□□□ 0.16
RNF4-208ENST00000507247 PTCH2Q9Y6C5 1203 aa16.03■□□□□ 0.16
RNF4-208ENST00000507247 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.02■□□□□ 0.16
RNF4-208ENST00000507247 ADCY6O43306 1168 aa16.02■□□□□ 0.16
RNF4-208ENST00000507247 MARCH6O60337 910 aa16.02■□□□□ 0.16
RNF4-208ENST00000507247 CYBAP13498 195 aa16.02■□□□□ 0.16
RNF4-208ENST00000507247 UBA1P22314 1058 aaKnown RBP16.02■□□□□ 0.16
RNF4-208ENST00000507247 PTGS1P23219 599 aa16.02■□□□□ 0.16
RNF4-208ENST00000507247 ADCYAP1R1P41586 468 aa16.02■□□□□ 0.16
RNF4-208ENST00000507247 TECP42680 631 aa16.02■□□□□ 0.16
RNF4-208ENST00000507247 ME1P48163 572 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms