RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 ZMYM6O95789 1325 aa11.18□□□□□ -0.62
CLCN3-205ENST00000506924 NEDD4P46934 1319 aa11.18□□□□□ -0.62
CLCN3-205ENST00000506924 ADGRA2Q96PE1 1338 aa11.18□□□□□ -0.62
CLCN3-205ENST00000506924 IGKV6D-41A0A0C4DH26 115 aa11.18□□□□□ -0.62
CLCN3-205ENST00000506924 ZBTB39O15060 712 aa11.18□□□□□ -0.62
CLCN3-205ENST00000506924 MZF1P28698 734 aaPredicted RBP11.18□□□□□ -0.62
CLCN3-205ENST00000506924 USP14P54578 494 aa11.18□□□□□ -0.62
CLCN3-205ENST00000506924 ARHGAP4P98171 946 aa11.18□□□□□ -0.62
CLCN3-205ENST00000506924 PABPC4Q13310 644 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLCN3-205ENST00000506924 AKNAD1Q5T1N1 836 aa11.18□□□□□ -0.62
CLCN3-205ENST00000506924 TREML4Q6UXN2 200 aa11.18□□□□□ -0.62
CLCN3-205ENST00000506924 MFSD6Q6ZSS7 791 aa11.18□□□□□ -0.62
CLCN3-205ENST00000506924 SND1Q7KZF4 910 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLCN3-205ENST00000506924 LRRC47Q8N1G4 583 aaKnown RBP11.18□□□□□ -0.62
CLCN3-205ENST00000506924 NEDD1Q8NHV4 660 aa11.18□□□□□ -0.62
CLCN3-205ENST00000506924 SLC45A1Q9Y2W3 748 aa11.18□□□□□ -0.62
CLCN3-205ENST00000506924 TMX2Q9Y320 296 aa11.18□□□□□ -0.62
CLCN3-205ENST00000506924 GREB1LQ9C091 1923 aaPredicted RBP11.17□□□□□ -0.62
CLCN3-205ENST00000506924 ORC4O43929 436 aa11.17□□□□□ -0.62
CLCN3-205ENST00000506924 CDC45O75419 566 aa11.17□□□□□ -0.62
CLCN3-205ENST00000506924 PCSK2P16519 638 aa11.17□□□□□ -0.62
CLCN3-205ENST00000506924 CTGFP29279 349 aa11.17□□□□□ -0.62
CLCN3-205ENST00000506924 MAP2K3P46734 347 aa11.17□□□□□ -0.62
CLCN3-205ENST00000506924 GAS6Q14393 721 aa11.17□□□□□ -0.62
CLCN3-205ENST00000506924 IMMTQ16891 758 aaKnown RBP11.17□□□□□ -0.62
CLCN3-205ENST00000506924 KIAA1211Q6ZU35 1233 aa11.17□□□□□ -0.62
CLCN3-205ENST00000506924 STAG1Q8WVM7 1258 aa11.17□□□□□ -0.62
CLCN3-205ENST00000506924 C12orf42Q96LP6 360 aa11.17□□□□□ -0.62
CLCN3-205ENST00000506924 CITED4Q96RK1 184 aa11.17□□□□□ -0.62
CLCN3-205ENST00000506924 NUP88Q99567 741 aaPredicted RBP11.17□□□□□ -0.62
CLCN3-205ENST00000506924 ZKSCAN3Q9BRR0 538 aa11.17□□□□□ -0.62
CLCN3-205ENST00000506924 PAGR1Q9BTK6 254 aa11.17□□□□□ -0.62
CLCN3-205ENST00000506924 TANGO6Q9C0B7 1094 aa11.17□□□□□ -0.62
CLCN3-205ENST00000506924 MCOLN1Q9GZU1 580 aa11.17□□□□□ -0.62
CLCN3-205ENST00000506924 VCPKMTQ9H867 229 aa11.17□□□□□ -0.62
CLCN3-205ENST00000506924 IL17RBQ9NRM6 502 aa11.17□□□□□ -0.62
CLCN3-205ENST00000506924 MTMR4Q9NYA4 1195 aa11.17□□□□□ -0.62
CLCN3-205ENST00000506924 CTNNA3Q9UI47 895 aa11.17□□□□□ -0.62
CLCN3-205ENST00000506924 FNDC3AQ9Y2H6 1198 aaKnown RBP11.17□□□□□ -0.62
CLCN3-205ENST00000506924 TRIM17Q9Y577 477 aa11.17□□□□□ -0.62
CLCN3-205ENST00000506924 TAF6LQ9Y6J9 622 aa11.17□□□□□ -0.62
CLCN3-205ENST00000506924 MYH4Q9Y623 1939 aa11.17□□□□□ -0.62
CLCN3-205ENST00000506924 B4E1Z4 1266 aa11.16□□□□□ -0.62
CLCN3-205ENST00000506924 TTLL1O95922 423 aa11.16□□□□□ -0.62
CLCN3-205ENST00000506924 FGRP09769 529 aa11.16□□□□□ -0.62
CLCN3-205ENST00000506924 BCRP11274 1271 aa11.16□□□□□ -0.62
CLCN3-205ENST00000506924 MX2P20592 715 aa11.16□□□□□ -0.62
CLCN3-205ENST00000506924 HOXA7P31268 230 aaPredicted RBP11.16□□□□□ -0.62
CLCN3-205ENST00000506924 HERVK_113P62684 666 aa11.16□□□□□ -0.62
CLCN3-205ENST00000506924 LACTBP83111 547 aaPredicted RBP11.16□□□□□ -0.62
CLCN3-205ENST00000506924 FAM83BQ5T0W9 1011 aa11.16□□□□□ -0.62
CLCN3-205ENST00000506924 CATSPERGQ6ZRH7 1159 aa11.16□□□□□ -0.62
CLCN3-205ENST00000506924 CTU1Q7Z7A3 348 aaKnown RBP11.16□□□□□ -0.62
CLCN3-205ENST00000506924 ERO1AQ96HE7 468 aa11.16□□□□□ -0.62
CLCN3-205ENST00000506924 COL25A1Q9BXS0 654 aaPredicted RBP11.16□□□□□ -0.62
CLCN3-205ENST00000506924 LSG1Q9H089 658 aaKnown RBP11.16□□□□□ -0.62
CLCN3-205ENST00000506924 SH2D4AQ9H788 454 aa11.16□□□□□ -0.62
CLCN3-205ENST00000506924 TXNRD2Q9NNW7 524 aa11.16□□□□□ -0.62
CLCN3-205ENST00000506924 NYAP2Q9P242 653 aa11.16□□□□□ -0.62
CLCN3-205ENST00000506924 ISY1Q9ULR0 285 aaKnown RBP11.16□□□□□ -0.62
CLCN3-205ENST00000506924 STX8Q9UNK0 236 aa11.16□□□□□ -0.62
CLCN3-205ENST00000506924 RBM8AQ9Y5S9 174 aaKnown RBP11.16□□□□□ -0.62
CLCN3-205ENST00000506924 LAMA4Q16363 1823 aa11.16□□□□□ -0.62
CLCN3-205ENST00000506924 F5H6K3 240 aa11.15□□□□□ -0.62
CLCN3-205ENST00000506924 NDUFB10O96000 172 aa11.15□□□□□ -0.62
CLCN3-205ENST00000506924 CYP21A2P08686 494 aa11.15□□□□□ -0.62
CLCN3-205ENST00000506924 PSMC4P43686 418 aa11.15□□□□□ -0.62
CLCN3-205ENST00000506924 KLRC3Q07444 240 aa11.15□□□□□ -0.62
CLCN3-205ENST00000506924 SFSWAPQ12872 951 aaKnown RBP11.15□□□□□ -0.62
CLCN3-205ENST00000506924 LCE2AQ5TA79 106 aaPredicted RBP11.15□□□□□ -0.62
CLCN3-205ENST00000506924 CASC1Q6TDU7 716 aa11.15□□□□□ -0.62
CLCN3-205ENST00000506924 RASGRP2Q7LDG7 609 aa11.15□□□□□ -0.62
CLCN3-205ENST00000506924 OTOP1Q7RTM1 612 aa11.15□□□□□ -0.62
CLCN3-205ENST00000506924 MAP4K1Q92918 833 aa11.15□□□□□ -0.62
CLCN3-205ENST00000506924 RNF41Q9H4P4 317 aaPredicted RBP11.15□□□□□ -0.62
CLCN3-205ENST00000506924 FBXO28Q9NVF7 368 aa11.15□□□□□ -0.62
CLCN3-205ENST00000506924 RBPJLQ9UBG7 517 aa11.15□□□□□ -0.62
CLCN3-205ENST00000506924 PLIN4Q96Q06 1357 aa11.15□□□□□ -0.63
CLCN3-205ENST00000506924 FZD6O60353 706 aa11.14□□□□□ -0.63
CLCN3-205ENST00000506924 FLOT1O75955 427 aa11.14□□□□□ -0.63
CLCN3-205ENST00000506924 SRSF11Q05519 484 aaKnown RBP11.14□□□□□ -0.63
CLCN3-205ENST00000506924 EHHADHQ08426 723 aa11.14□□□□□ -0.63
CLCN3-205ENST00000506924 KIF22Q14807 665 aa11.14□□□□□ -0.63
CLCN3-205ENST00000506924 SLFN13Q68D06 897 aa11.14□□□□□ -0.63
CLCN3-205ENST00000506924 LPAR1Q92633 364 aa11.14□□□□□ -0.63
CLCN3-205ENST00000506924 ESR2Q92731 530 aa11.14□□□□□ -0.63
CLCN3-205ENST00000506924 HCN2Q9UL51 889 aa11.14□□□□□ -0.63
CLCN3-205ENST00000506924 WDR46O15213 610 aaKnown RBP11.13□□□□□ -0.63
CLCN3-205ENST00000506924 NDUFB5O43674 189 aa11.13□□□□□ -0.63
CLCN3-205ENST00000506924 CNMDO75829 334 aa11.13□□□□□ -0.63
CLCN3-205ENST00000506924 CD33P20138 364 aa11.13□□□□□ -0.63
CLCN3-205ENST00000506924 MCCP23508 829 aa11.13□□□□□ -0.63
CLCN3-205ENST00000506924 GRNP28799 593 aaKnown RBP11.13□□□□□ -0.63
CLCN3-205ENST00000506924 GCLCP48506 637 aaPredicted RBP11.13□□□□□ -0.63
CLCN3-205ENST00000506924 COG2Q14746 738 aa11.13□□□□□ -0.63
CLCN3-205ENST00000506924 STOX1Q6ZVD7 989 aa11.13□□□□□ -0.63
CLCN3-205ENST00000506924 CYB5R4Q7L1T6 521 aa11.13□□□□□ -0.63
CLCN3-205ENST00000506924 CHST3Q7LGC8 479 aa11.13□□□□□ -0.63
CLCN3-205ENST00000506924 GPRC5AQ8NFJ5 357 aa11.13□□□□□ -0.63
CLCN3-205ENST00000506924 MKL1Q969V6 931 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms