RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 KLRC4O43908 158 aa6.77□□□□□ -1.33
SCLT1-207ENST00000506233 KATNA1O75449 491 aa6.77□□□□□ -1.33
SCLT1-207ENST00000506233 BPNT1O95861 308 aa6.77□□□□□ -1.33
SCLT1-207ENST00000506233 CHRNA5P30532 468 aa6.77□□□□□ -1.33
SCLT1-207ENST00000506233 SARM1Q6SZW1 724 aa6.77□□□□□ -1.33
SCLT1-207ENST00000506233 ATP8A2Q9NTI2 1148 aa6.77□□□□□ -1.33
SCLT1-207ENST00000506233 MAP3K20Q9NYL2 800 aaKnown RBP6.77□□□□□ -1.33
SCLT1-207ENST00000506233 MAPK8IP1Q9UQF2 711 aa6.77□□□□□ -1.33
SCLT1-207ENST00000506233 BCS1LQ9Y276 419 aa6.77□□□□□ -1.33
SCLT1-207ENST00000506233 KIAA1217Q5T5P2 1943 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 MYO15AQ9UKN7 3530 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 POLR3DP05423 398 aaPredicted RBP6.76□□□□□ -1.33
SCLT1-207ENST00000506233 GNAT2P19087 354 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 CCZ1BP86790 482 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 CCZ1P86791 482 aaPredicted RBP6.76□□□□□ -1.33
SCLT1-207ENST00000506233 CUL4BQ13620 913 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 CCSAPQ6IQ19 270 aaPredicted RBP6.76□□□□□ -1.33
SCLT1-207ENST00000506233 CDC42EP5Q6NZY7 148 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 IRF2BP1Q8IU81 584 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 ZNF296Q8WUU4 475 aaPredicted RBP6.76□□□□□ -1.33
SCLT1-207ENST00000506233 BPIFA3Q9BQP9 254 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 PTPRHQ9HD43 1115 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 KCND1Q9NSA2 647 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 INTUQ9ULD6 942 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 USP20Q9Y2K6 914 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 PTCH2Q9Y6C5 1203 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 COMMD10Q9Y6G5 202 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.76□□□□□ -1.33
SCLT1-207ENST00000506233 DNAH14Q0VDD8 3507 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 VPS37CA5D8V6 355 aaPredicted RBP6.76□□□□□ -1.33
SCLT1-207ENST00000506233 YEATS4O95619 227 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 CASP1P29466 404 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 SETQ01105 290 aaPredicted RBP6.76□□□□□ -1.33
SCLT1-207ENST00000506233 MAP3K12Q12852 859 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 TBX2Q13207 712 aaPredicted RBP6.76□□□□□ -1.33
SCLT1-207ENST00000506233 GRM4Q14833 912 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 PPP2R5AQ15172 486 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 PFKFB3Q16875 520 aaPredicted RBP6.76□□□□□ -1.33
SCLT1-207ENST00000506233 DMRTA1Q5VZB9 504 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 WWC2Q6AWC2 1192 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 GRAMD1CQ8IYS0 662 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 ARMC2Q8NEN0 867 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 BAP1Q92560 729 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 AIDAQ96BJ3 306 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 ZNF830Q96NB3 372 aaPredicted RBP6.76□□□□□ -1.33
SCLT1-207ENST00000506233 TMEM60Q9H2L4 133 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 RIOX1Q9H6W3 641 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.76□□□□□ -1.33
SCLT1-207ENST00000506233 PCDHA6Q9UN73 950 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 PCDHA8Q9Y5H6 950 aa6.76□□□□□ -1.33
SCLT1-207ENST00000506233 MBD3O95983 291 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 TAL1P17542 331 aaPredicted RBP6.75□□□□□ -1.33
SCLT1-207ENST00000506233 RFC4P35249 363 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 EIF4A3P38919 411 aaKnown RBP6.75□□□□□ -1.33
SCLT1-207ENST00000506233 ANO1Q5XXA6 986 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 NOSTRINQ8IVI9 506 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 MYO19Q96H55 970 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 TMEM47Q9BQJ4 181 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 ANKRD2Q9GZV1 360 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 FOXP1Q9H334 677 aaPredicted RBP6.75□□□□□ -1.33
SCLT1-207ENST00000506233 CTNNA3Q9UI47 895 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 A0A1W2PRG0 241 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 USP27XA6NNY8 438 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 ERVH48-1M5A8F1 160 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 PPEF1O14829 653 aaPredicted RBP6.75□□□□□ -1.33
SCLT1-207ENST00000506233 CMA1P23946 247 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 METAP2P50579 478 aaKnown RBP eCLIP6.75□□□□□ -1.33
SCLT1-207ENST00000506233 C2orf27AQ580R0 203 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 KRBA2Q6ZNG9 492 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 MICU3Q86XE3 530 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 LENG9Q96B70 501 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 RNF26Q9BY78 433 aaPredicted RBP6.75□□□□□ -1.33
SCLT1-207ENST00000506233 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.75□□□□□ -1.33
SCLT1-207ENST00000506233 AVENQ9NQS1 362 aaPredicted RBP6.75□□□□□ -1.33
SCLT1-207ENST00000506233 PCDH10Q9P2E7 1040 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 FAM8A1Q9UBU6 413 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 A0A0U1RQJ8 604 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 ZPR1O75312 459 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 SLC15A2Q16348 729 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 KMT5BQ4FZB7 885 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 KRT26Q7Z3Y9 468 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 DAGLBQ8NCG7 672 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 ATRIPQ8WXE1 791 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 SLC10A4Q96EP9 437 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 TEPSINQ96N21 525 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 CEP89Q96ST8 783 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 MRIQ9BWK5 157 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 ASPSCR1Q9BZE9 553 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 BCAS3Q9H6U6 928 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 ZIM2Q9NZV7 527 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 VPS54Q9P1Q0 977 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 ORC3Q9UBD5 711 aaPredicted RBP6.75□□□□□ -1.33
SCLT1-207ENST00000506233 PARP3Q9Y6F1 533 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 ZSWIM8A7E2V4 1837 aa6.75□□□□□ -1.33
SCLT1-207ENST00000506233 IFRD1O00458 451 aaPredicted RBP6.74□□□□□ -1.33
SCLT1-207ENST00000506233 CPNE3O75131 537 aaKnown RBP6.74□□□□□ -1.33
SCLT1-207ENST00000506233 BBOX1O75936 387 aa6.74□□□□□ -1.33
SCLT1-207ENST00000506233 MMP10P09238 476 aa6.74□□□□□ -1.33
SCLT1-207ENST00000506233 CNGA1P29973 690 aa6.74□□□□□ -1.33
SCLT1-207ENST00000506233 CDK8P49336 464 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms