RNA–Protein interactions for RNA: ENST00000506188.5

SNHG4-203, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 801 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-203ENST00000506188 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.07■□□□□ 0.16
SNHG4-203ENST00000506188 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.07■□□□□ 0.16
SNHG4-203ENST00000506188 SPATA31C2B4DYI2 1134 aa16.07■□□□□ 0.16
SNHG4-203ENST00000506188 SOX1O00570 391 aaPredicted RBP16.07■□□□□ 0.16
SNHG4-203ENST00000506188 FGBP02675 491 aa16.07■□□□□ 0.16
SNHG4-203ENST00000506188 PFKMP08237 780 aa16.07■□□□□ 0.16
SNHG4-203ENST00000506188 ACTN1P12814 892 aa16.07■□□□□ 0.16
SNHG4-203ENST00000506188 UBA1P22314 1058 aaKnown RBP16.07■□□□□ 0.16
SNHG4-203ENST00000506188 ICAM3P32942 547 aa16.07■□□□□ 0.16
SNHG4-203ENST00000506188 SMAD3P84022 425 aaKnown RBP16.07■□□□□ 0.16
SNHG4-203ENST00000506188 PTGISQ16647 500 aa16.07■□□□□ 0.16
SNHG4-203ENST00000506188 C9orf50Q5SZB4 431 aa16.07■□□□□ 0.16
SNHG4-203ENST00000506188 IL31RAQ8NI17 732 aa16.07■□□□□ 0.16
SNHG4-203ENST00000506188 GPKOWQ92917 476 aaPredicted RBP eCLIP16.07■□□□□ 0.16
SNHG4-203ENST00000506188 GPRASP2Q96D09 838 aa16.07■□□□□ 0.16
SNHG4-203ENST00000506188 SENP7Q9BQF6 1050 aa16.07■□□□□ 0.16
SNHG4-203ENST00000506188 NOC4LQ9BVI4 516 aaKnown RBP16.07■□□□□ 0.16
SNHG4-203ENST00000506188 USP26Q9BXU7 913 aa16.07■□□□□ 0.16
SNHG4-203ENST00000506188 IL23AQ9NPF7 189 aa16.07■□□□□ 0.16
SNHG4-203ENST00000506188 TRMT13Q9NUP7 481 aaKnown RBP16.07■□□□□ 0.16
SNHG4-203ENST00000506188 PCDHA6Q9UN73 950 aa16.07■□□□□ 0.16
SNHG4-203ENST00000506188 PCDHA8Q9Y5H6 950 aa16.07■□□□□ 0.16
SNHG4-203ENST00000506188 FRMPD4Q14CM0 1322 aa16.06■□□□□ 0.16
SNHG4-203ENST00000506188 SMCO2A6NFE2 343 aa16.06■□□□□ 0.16
SNHG4-203ENST00000506188 CPLX1O14810 134 aa16.06■□□□□ 0.16
SNHG4-203ENST00000506188 CPA1P15085 419 aa16.06■□□□□ 0.16
SNHG4-203ENST00000506188 GNA11P29992 359 aa16.06■□□□□ 0.16
SNHG4-203ENST00000506188 RFC2P35250 354 aa16.06■□□□□ 0.16
SNHG4-203ENST00000506188 ZNF76P36508 570 aa16.06■□□□□ 0.16
SNHG4-203ENST00000506188 PSEN2P49810 448 aa16.06■□□□□ 0.16
SNHG4-203ENST00000506188 CCL23P55773 120 aa16.06■□□□□ 0.16
SNHG4-203ENST00000506188 MFSD10Q14728 455 aa16.06■□□□□ 0.16
SNHG4-203ENST00000506188 KIAA0753Q2KHM9 967 aa16.06■□□□□ 0.16
SNHG4-203ENST00000506188 ZNF697Q5TEC3 545 aa16.06■□□□□ 0.16
SNHG4-203ENST00000506188 FAM109BQ6ICB4 259 aaPredicted RBP16.06■□□□□ 0.16
SNHG4-203ENST00000506188 METTL7BQ6UX53 244 aa16.06■□□□□ 0.16
SNHG4-203ENST00000506188 SESTD1Q86VW0 696 aa16.06■□□□□ 0.16
SNHG4-203ENST00000506188 TRIM22Q8IYM9 498 aa16.06■□□□□ 0.16
SNHG4-203ENST00000506188 BICD2Q8TD16 824 aa16.06■□□□□ 0.16
SNHG4-203ENST00000506188 ALG1Q9BT22 464 aa16.06■□□□□ 0.16
SNHG4-203ENST00000506188 TM6SF1Q9BZW5 370 aa16.06■□□□□ 0.16
SNHG4-203ENST00000506188 C6orf50Q9HD87 102 aa16.06■□□□□ 0.16
SNHG4-203ENST00000506188 RIC8AQ9NPQ8 531 aa16.06■□□□□ 0.16
SNHG4-203ENST00000506188 BARHL2Q9NY43 387 aa16.06■□□□□ 0.16
SNHG4-203ENST00000506188 ZNF215Q9UL58 517 aaPredicted RBP16.06■□□□□ 0.16
SNHG4-203ENST00000506188 CNTNAP5Q8WYK1 1306 aa16.05■□□□□ 0.16
SNHG4-203ENST00000506188 PITPNM1O00562 1244 aa16.05■□□□□ 0.16
SNHG4-203ENST00000506188 RGS20O76081 388 aa16.05■□□□□ 0.16
SNHG4-203ENST00000506188 PARNO95453 639 aaKnown RBP16.05■□□□□ 0.16
SNHG4-203ENST00000506188 GNAT1P11488 350 aa16.05■□□□□ 0.16
SNHG4-203ENST00000506188 CYP2C9P11712 490 aa16.05■□□□□ 0.16
SNHG4-203ENST00000506188 ADD1P35611 737 aaKnown RBP16.05■□□□□ 0.16
SNHG4-203ENST00000506188 MRPS9P82933 396 aaKnown RBP16.05■□□□□ 0.16
SNHG4-203ENST00000506188 AP3B2Q13367 1082 aa16.05■□□□□ 0.16
SNHG4-203ENST00000506188 MTMR1Q13613 665 aa16.05■□□□□ 0.16
SNHG4-203ENST00000506188 COL9A3Q14050 684 aaPredicted RBP16.05■□□□□ 0.16
SNHG4-203ENST00000506188 WWC2Q6AWC2 1192 aa16.05■□□□□ 0.16
SNHG4-203ENST00000506188 CYFIP1Q7L576 1253 aa16.05■□□□□ 0.16
SNHG4-203ENST00000506188 CAGE1Q8TC20 777 aa16.05■□□□□ 0.16
SNHG4-203ENST00000506188 TNPO1Q92973 898 aaKnown RBP16.05■□□□□ 0.16
SNHG4-203ENST00000506188 ZFP91Q96JP5 570 aaPredicted RBP16.05■□□□□ 0.16
SNHG4-203ENST00000506188 ZSWIM6Q9HCJ5 1215 aa16.05■□□□□ 0.16
SNHG4-203ENST00000506188 H3BRB1 525 aa16.04■□□□□ 0.16
SNHG4-203ENST00000506188 SORBS3O60504 671 aa16.04■□□□□ 0.16
SNHG4-203ENST00000506188 F2P00734 622 aa16.04■□□□□ 0.16
SNHG4-203ENST00000506188 SCG2P13521 617 aa16.04■□□□□ 0.16
SNHG4-203ENST00000506188 UBE2SQ16763 222 aa16.04■□□□□ 0.16
SNHG4-203ENST00000506188 PFKFB3Q16875 520 aaPredicted RBP16.04■□□□□ 0.16
SNHG4-203ENST00000506188 HSDL1Q3SXM5 330 aa16.04■□□□□ 0.16
SNHG4-203ENST00000506188 ZNF365Q70YC5 407 aa16.04■□□□□ 0.16
SNHG4-203ENST00000506188 CCDC148Q8NFR7 591 aa16.04■□□□□ 0.16
SNHG4-203ENST00000506188 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.04■□□□□ 0.16
SNHG4-203ENST00000506188 FTOQ9C0B1 505 aaKnown RBP eCLIP16.04■□□□□ 0.16
SNHG4-203ENST00000506188 TUT1Q9H6E5 874 aaKnown RBP16.04■□□□□ 0.16
SNHG4-203ENST00000506188 PDRG1Q9NUG6 133 aa16.04■□□□□ 0.16
SNHG4-203ENST00000506188 STXBP3O00186 592 aa16.03■□□□□ 0.16
SNHG4-203ENST00000506188 PRPF3O43395 683 aaKnown RBP16.03■□□□□ 0.16
SNHG4-203ENST00000506188 ZNF286BP0CG31 522 aa16.03■□□□□ 0.16
SNHG4-203ENST00000506188 ACRP10323 421 aa16.03■□□□□ 0.16
SNHG4-203ENST00000506188 CDC27P30260 824 aa16.03■□□□□ 0.16
SNHG4-203ENST00000506188 EPHB4P54760 987 aa16.03■□□□□ 0.16
SNHG4-203ENST00000506188 SP2Q02086 613 aa16.03■□□□□ 0.16
SNHG4-203ENST00000506188 TMEM240Q5SV17 173 aa16.03■□□□□ 0.16
SNHG4-203ENST00000506188 AFAP1L1Q8TED9 768 aa16.03■□□□□ 0.16
SNHG4-203ENST00000506188 KAT2BQ92831 832 aa16.03■□□□□ 0.16
SNHG4-203ENST00000506188 SDF4Q9BRK5 362 aa16.03■□□□□ 0.16
SNHG4-203ENST00000506188 AGXT2Q9BYV1 514 aa16.03■□□□□ 0.16
SNHG4-203ENST00000506188 GTF2IRD1Q9UHL9 959 aa16.03■□□□□ 0.16
SNHG4-203ENST00000506188 ALPK3Q96L96 1907 aa16.03■□□□□ 0.16
SNHG4-203ENST00000506188 TMEM265A0A087WTH1 108 aa16.02■□□□□ 0.16
SNHG4-203ENST00000506188 ZBBXA8MT70 800 aa16.02■□□□□ 0.16
SNHG4-203ENST00000506188 CDKL5O76039 1030 aa16.02■□□□□ 0.16
SNHG4-203ENST00000506188 HOXD8P13378 290 aaPredicted RBP16.02■□□□□ 0.16
SNHG4-203ENST00000506188 PDIA3P30101 505 aaKnown RBP16.02■□□□□ 0.16
SNHG4-203ENST00000506188 ANAPC15P60006 121 aa16.02■□□□□ 0.16
SNHG4-203ENST00000506188 SP4Q02446 784 aa16.02■□□□□ 0.16
SNHG4-203ENST00000506188 SSRP1Q08945 709 aaKnown RBP16.02■□□□□ 0.16
SNHG4-203ENST00000506188 FUT2Q10981 343 aa16.02■□□□□ 0.16
SNHG4-203ENST00000506188 PTK7Q13308 1070 aa16.02■□□□□ 0.16
SNHG4-203ENST00000506188 ANKRD1Q15327 319 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms