RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 PCDH19Q8TAB3 1148 aa8.2□□□□□ -1.1
NIPBL-205ENST00000505998 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.2□□□□□ -1.1
NIPBL-205ENST00000505998 TSPAN17Q96FV3 270 aa8.2□□□□□ -1.1
NIPBL-205ENST00000505998 TCRBV16S1A1N1A0A5B0 115 aa8.19□□□□□ -1.1
NIPBL-205ENST00000505998 HGSO14964 777 aaPredicted RBP8.19□□□□□ -1.1
NIPBL-205ENST00000505998 GSTA4O15217 222 aa8.19□□□□□ -1.1
NIPBL-205ENST00000505998 SGSM2O43147 1006 aa8.19□□□□□ -1.1
NIPBL-205ENST00000505998 MAFKO60675 156 aa8.19□□□□□ -1.1
NIPBL-205ENST00000505998 ST5P78524 1137 aa8.19□□□□□ -1.1
NIPBL-205ENST00000505998 FAM47CQ5HY64 1035 aa8.19□□□□□ -1.1
NIPBL-205ENST00000505998 ALG3Q92685 438 aa8.19□□□□□ -1.1
NIPBL-205ENST00000505998 FBXW5Q969U6 566 aa8.19□□□□□ -1.1
NIPBL-205ENST00000505998 CATSPERZQ9NTU4 200 aa8.19□□□□□ -1.1
NIPBL-205ENST00000505998 PALD1Q9ULE6 856 aa8.19□□□□□ -1.1
NIPBL-205ENST00000505998 TEX51A0A1B0GUA7 166 aa8.18□□□□□ -1.1
NIPBL-205ENST00000505998 WNT9AO14904 365 aa8.18□□□□□ -1.1
NIPBL-205ENST00000505998 OPA1O60313 960 aa8.18□□□□□ -1.1
NIPBL-205ENST00000505998 SEMA7AO75326 666 aa8.18□□□□□ -1.1
NIPBL-205ENST00000505998 COL6A2P12110 1019 aa8.18□□□□□ -1.1
NIPBL-205ENST00000505998 ZNF200P98182 395 aaPredicted RBP8.18□□□□□ -1.1
NIPBL-205ENST00000505998 TAF7LQ5H9L4 462 aa8.18□□□□□ -1.1
NIPBL-205ENST00000505998 EMC4Q5J8M3 183 aa8.18□□□□□ -1.1
NIPBL-205ENST00000505998 OTOP3Q7RTS5 596 aa8.18□□□□□ -1.1
NIPBL-205ENST00000505998 MILR1Q7Z6M3 343 aa8.18□□□□□ -1.1
NIPBL-205ENST00000505998 PIP4K2CQ8TBX8 421 aa8.18□□□□□ -1.1
NIPBL-205ENST00000505998 KCNN1Q92952 543 aa8.18□□□□□ -1.1
NIPBL-205ENST00000505998 FAM84AQ96KN4 292 aa8.18□□□□□ -1.1
NIPBL-205ENST00000505998 SLC6A20Q9NP91 592 aa8.18□□□□□ -1.1
NIPBL-205ENST00000505998 PLAAQ9Y263 795 aa8.18□□□□□ -1.1
NIPBL-205ENST00000505998 DNAJC8O75937 253 aaPredicted RBP8.17□□□□□ -1.1
NIPBL-205ENST00000505998 PYGMP11217 842 aa8.17□□□□□ -1.1
NIPBL-205ENST00000505998 SDSP20132 328 aa8.17□□□□□ -1.1
NIPBL-205ENST00000505998 IGFALSP35858 605 aa8.17□□□□□ -1.1
NIPBL-205ENST00000505998 DNM2P50570 870 aa8.17□□□□□ -1.1
NIPBL-205ENST00000505998 OGFOD2Q6N063 350 aa8.17□□□□□ -1.1
NIPBL-205ENST00000505998 SYDE1Q6ZW31 735 aaPredicted RBP8.17□□□□□ -1.1
NIPBL-205ENST00000505998 C16orf59Q7L2K0 433 aa8.17□□□□□ -1.1
NIPBL-205ENST00000505998 NINJ1Q92982 152 aa8.17□□□□□ -1.1
NIPBL-205ENST00000505998 SLC38A3Q99624 504 aa8.17□□□□□ -1.1
NIPBL-205ENST00000505998 SLKQ9H2G2 1235 aaPredicted RBP8.17□□□□□ -1.1
NIPBL-205ENST00000505998 MAGEC2Q9UBF1 373 aaPredicted RBP8.17□□□□□ -1.1
NIPBL-205ENST00000505998 ZNF652Q9Y2D9 606 aa8.17□□□□□ -1.1
NIPBL-205ENST00000505998 CCDC66A2RUB6 948 aa8.16□□□□□ -1.1
NIPBL-205ENST00000505998 B4E1Z4 1266 aa8.16□□□□□ -1.1
NIPBL-205ENST00000505998 TADA3O75528 432 aa8.16□□□□□ -1.1
NIPBL-205ENST00000505998 ASLP04424 464 aa8.16□□□□□ -1.1
NIPBL-205ENST00000505998 MESP2Q0VG99 397 aa8.16□□□□□ -1.1
NIPBL-205ENST00000505998 NIM1KQ8IY84 436 aa8.16□□□□□ -1.1
NIPBL-205ENST00000505998 PHOSPHO1Q8TCT1 267 aa8.16□□□□□ -1.1
NIPBL-205ENST00000505998 PANK1Q8TE04 598 aa8.16□□□□□ -1.1
NIPBL-205ENST00000505998 SGPP1Q9BX95 441 aa8.16□□□□□ -1.1
NIPBL-205ENST00000505998 SMOC1Q9H4F8 434 aa8.16□□□□□ -1.1
NIPBL-205ENST00000505998 BCAS3Q9H6U6 928 aa8.16□□□□□ -1.1
NIPBL-205ENST00000505998 CNTD2Q9H8S5 307 aa8.16□□□□□ -1.1
NIPBL-205ENST00000505998 INTS7Q9NVH2 962 aaKnown RBP8.16□□□□□ -1.1
NIPBL-205ENST00000505998 MYOTQ9UBF9 498 aa8.16□□□□□ -1.1
NIPBL-205ENST00000505998 MBD1Q9UIS9 605 aaPredicted RBP8.16□□□□□ -1.1
NIPBL-205ENST00000505998 NUB1Q9Y5A7 615 aa8.16□□□□□ -1.1
NIPBL-205ENST00000505998 PCDHB4Q9Y5E5 795 aa8.16□□□□□ -1.1
NIPBL-205ENST00000505998 TNPO3Q9Y5L0 923 aaKnown RBP8.16□□□□□ -1.1
NIPBL-205ENST00000505998 LAMC3Q9Y6N6 1575 aa8.15□□□□□ -1.1
NIPBL-205ENST00000505998 IRS4O14654 1257 aaPredicted RBP8.15□□□□□ -1.1
NIPBL-205ENST00000505998 NKRFO15226 690 aaKnown RBP eCLIP8.15□□□□□ -1.1
NIPBL-205ENST00000505998 TMEM253P0C7T8 217 aa8.15□□□□□ -1.1
NIPBL-205ENST00000505998 CRY1Q16526 586 aa8.15□□□□□ -1.1
NIPBL-205ENST00000505998 DALRD3Q5D0E6 543 aaKnown RBP8.15□□□□□ -1.1
NIPBL-205ENST00000505998 CYP4F22Q6NT55 531 aa8.15□□□□□ -1.1
NIPBL-205ENST00000505998 LDHDQ86WU2 507 aa8.15□□□□□ -1.1
NIPBL-205ENST00000505998 DHX37Q8IY37 1157 aaKnown RBP8.15□□□□□ -1.1
NIPBL-205ENST00000505998 FMNL2Q96PY5 1086 aa8.15□□□□□ -1.1
NIPBL-205ENST00000505998 DSEQ9UL01 958 aa8.15□□□□□ -1.1
NIPBL-205ENST00000505998 COQ6Q9Y2Z9 468 aa8.15□□□□□ -1.1
NIPBL-205ENST00000505998 NPTXRO95502 500 aa8.14□□□□□ -1.11
NIPBL-205ENST00000505998 CKMP06732 381 aa8.14□□□□□ -1.11
NIPBL-205ENST00000505998 FLT3P36888 993 aa8.14□□□□□ -1.11
NIPBL-205ENST00000505998 CDR1P51861 262 aa8.14□□□□□ -1.11
NIPBL-205ENST00000505998 GYS2P54840 703 aa8.14□□□□□ -1.11
NIPBL-205ENST00000505998 DLG4P78352 724 aa8.14□□□□□ -1.11
NIPBL-205ENST00000505998 ZNF460Q14592 562 aa8.14□□□□□ -1.11
NIPBL-205ENST00000505998 TARBP2Q15633 366 aaKnown RBP8.14□□□□□ -1.11
NIPBL-205ENST00000505998 HABP4Q5JVS0 413 aaKnown RBP8.14□□□□□ -1.11
NIPBL-205ENST00000505998 DDX53Q86TM3 631 aaKnown RBP8.14□□□□□ -1.11
NIPBL-205ENST00000505998 POU5F2Q8N7G0 328 aa8.14□□□□□ -1.11
NIPBL-205ENST00000505998 UHMK1Q8TAS1 419 aaKnown RBP8.14□□□□□ -1.11
NIPBL-205ENST00000505998 MFSD3Q96ES6 412 aa8.14□□□□□ -1.11
NIPBL-205ENST00000505998 PPP1R16BQ96T49 567 aa8.14□□□□□ -1.11
NIPBL-205ENST00000505998 CELF4Q9BZC1 486 aaKnown RBP8.14□□□□□ -1.11
NIPBL-205ENST00000505998 CBLCQ9ULV8 474 aa8.14□□□□□ -1.11
NIPBL-205ENST00000505998 TCRBV5S2A0A599 114 aa8.13□□□□□ -1.11
NIPBL-205ENST00000505998 ETV2O00321 342 aaPredicted RBP8.13□□□□□ -1.11
NIPBL-205ENST00000505998 SLC27A2O14975 620 aa8.13□□□□□ -1.11
NIPBL-205ENST00000505998 NCAM1P13591 858 aa8.13□□□□□ -1.11
NIPBL-205ENST00000505998 PDE6AP16499 860 aa8.13□□□□□ -1.11
NIPBL-205ENST00000505998 KCNA6P17658 529 aa8.13□□□□□ -1.11
NIPBL-205ENST00000505998 PFKLP17858 780 aa8.13□□□□□ -1.11
NIPBL-205ENST00000505998 KRT15P19012 456 aa8.13□□□□□ -1.11
NIPBL-205ENST00000505998 PMLP29590 882 aa8.13□□□□□ -1.11
NIPBL-205ENST00000505998 NCKAP1LP55160 1127 aa8.13□□□□□ -1.11
NIPBL-205ENST00000505998 GPR19Q15760 415 aa8.13□□□□□ -1.11
NIPBL-205ENST00000505998 ZNF648Q5T619 568 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms