RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 KREMEN2Q8NCW0 462 aa8.18□□□□□ -1.1
CHD1-204ENST00000505982 PANK1Q8TE04 598 aa8.18□□□□□ -1.1
CHD1-204ENST00000505982 FRS2Q8WU20 508 aa8.18□□□□□ -1.1
CHD1-204ENST00000505982 SCLYQ96I15 445 aa8.18□□□□□ -1.1
CHD1-204ENST00000505982 SLC12A9Q9BXP2 914 aa8.18□□□□□ -1.1
CHD1-204ENST00000505982 XYLT2Q9H1B5 865 aa8.18□□□□□ -1.1
CHD1-204ENST00000505982 TYW1Q9NV66 732 aaKnown RBP8.18□□□□□ -1.1
CHD1-204ENST00000505982 CLEC1BQ9P126 229 aa8.18□□□□□ -1.1
CHD1-204ENST00000505982 TCFL5Q9UL49 500 aa8.18□□□□□ -1.1
CHD1-204ENST00000505982 ASXL2Q76L83 1435 aa8.18□□□□□ -1.1
CHD1-204ENST00000505982 B4E1Z4 1266 aa8.17□□□□□ -1.1
CHD1-204ENST00000505982 FKTNO75072 461 aa8.17□□□□□ -1.1
CHD1-204ENST00000505982 USP2O75604 605 aaPredicted RBP8.17□□□□□ -1.1
CHD1-204ENST00000505982 PDGFRBP09619 1106 aa8.17□□□□□ -1.1
CHD1-204ENST00000505982 PLS3P13797 630 aa8.17□□□□□ -1.1
CHD1-204ENST00000505982 STRN3Q13033 797 aa8.17□□□□□ -1.1
CHD1-204ENST00000505982 FAM50AQ14320 339 aaKnown RBP8.17□□□□□ -1.1
CHD1-204ENST00000505982 ACBD5Q5T8D3 534 aaPredicted RBP8.17□□□□□ -1.1
CHD1-204ENST00000505982 EEF1DP3Q658K8 133 aa8.17□□□□□ -1.1
CHD1-204ENST00000505982 OLFML2BQ68BL8 750 aa8.17□□□□□ -1.1
CHD1-204ENST00000505982 WAPLQ7Z5K2 1190 aa8.17□□□□□ -1.1
CHD1-204ENST00000505982 IFNL3Q8IZI9 196 aa8.17□□□□□ -1.1
CHD1-204ENST00000505982 USHBP1Q8N6Y0 703 aa8.17□□□□□ -1.1
CHD1-204ENST00000505982 NPLOC4Q8TAT6 608 aa8.17□□□□□ -1.1
CHD1-204ENST00000505982 STAG1Q8WVM7 1258 aa8.17□□□□□ -1.1
CHD1-204ENST00000505982 DACT3Q96B18 629 aaPredicted RBP8.17□□□□□ -1.1
CHD1-204ENST00000505982 CDADC1Q9BWV3 514 aa8.17□□□□□ -1.1
CHD1-204ENST00000505982 FOXP3Q9BZS1 431 aa8.17□□□□□ -1.1
CHD1-204ENST00000505982 TCRBV16S1A1N1A0A5B0 115 aa8.16□□□□□ -1.1
CHD1-204ENST00000505982 N4BP3O15049 544 aa8.16□□□□□ -1.1
CHD1-204ENST00000505982 ZNF205O95201 554 aa8.16□□□□□ -1.1
CHD1-204ENST00000505982 PAMP19021 973 aa8.16□□□□□ -1.1
CHD1-204ENST00000505982 LTBRP36941 435 aa8.16□□□□□ -1.1
CHD1-204ENST00000505982 PCBP1Q15365 356 aaKnown RBP eCLIP8.16□□□□□ -1.1
CHD1-204ENST00000505982 E4F1Q66K89 784 aaPredicted RBP8.16□□□□□ -1.1
CHD1-204ENST00000505982 RCSD1Q6JBY9 416 aa8.16□□□□□ -1.1
CHD1-204ENST00000505982 PKN3Q6P5Z2 889 aa8.16□□□□□ -1.1
CHD1-204ENST00000505982 CEP128Q6ZU80 1094 aa8.16□□□□□ -1.1
CHD1-204ENST00000505982 NAT16Q8N8M0 369 aa8.16□□□□□ -1.1
CHD1-204ENST00000505982 DIO2Q92813 273 aa8.16□□□□□ -1.1
CHD1-204ENST00000505982 PCDHA8Q9Y5H6 950 aa8.16□□□□□ -1.1
CHD1-204ENST00000505982 OTOL1A6NHN0 477 aaPredicted RBP8.15□□□□□ -1.1
CHD1-204ENST00000505982 ALG1L2C9J202 215 aa8.15□□□□□ -1.1
CHD1-204ENST00000505982 POU3F3P20264 500 aaPredicted RBP8.15□□□□□ -1.1
CHD1-204ENST00000505982 GPR85P60893 370 aa8.15□□□□□ -1.1
CHD1-204ENST00000505982 KCNAB2Q13303 367 aa8.15□□□□□ -1.1
CHD1-204ENST00000505982 PIK3R6Q5UE93 754 aa8.15□□□□□ -1.1
CHD1-204ENST00000505982 RSPO2Q6UXX9 243 aaPredicted RBP8.15□□□□□ -1.1
CHD1-204ENST00000505982 DDX53Q86TM3 631 aaKnown RBP8.15□□□□□ -1.1
CHD1-204ENST00000505982 ZC3H7AQ8IWR0 971 aaKnown RBP8.15□□□□□ -1.1
CHD1-204ENST00000505982 AFAP1L2Q8N4X5 818 aa8.15□□□□□ -1.1
CHD1-204ENST00000505982 LINC00116Q8NCU8 138 aa8.15□□□□□ -1.1
CHD1-204ENST00000505982 MAP6Q96JE9 813 aa8.15□□□□□ -1.1
CHD1-204ENST00000505982 ZFYVE21Q9BQ24 234 aa8.15□□□□□ -1.1
CHD1-204ENST00000505982 ALG1Q9BT22 464 aa8.15□□□□□ -1.1
CHD1-204ENST00000505982 GPR27Q9NS67 375 aa8.15□□□□□ -1.1
CHD1-204ENST00000505982 AP5S1Q9NUS5 200 aa8.15□□□□□ -1.1
CHD1-204ENST00000505982 TMEFF2Q9UIK5 374 aaPredicted RBP8.15□□□□□ -1.1
CHD1-204ENST00000505982 G3BP2Q9UN86 482 aaKnown RBP8.15□□□□□ -1.1
CHD1-204ENST00000505982 TRBV23OR9-2A0A075B6M9 112 aa8.14□□□□□ -1.11
CHD1-204ENST00000505982 NPHP3-ACAD11A0A0J9YXS1 232 aa8.14□□□□□ -1.11
CHD1-204ENST00000505982 ABLIM1O14639 778 aa8.14□□□□□ -1.11
CHD1-204ENST00000505982 PNLIPP16233 465 aa8.14□□□□□ -1.11
CHD1-204ENST00000505982 VIPR1P32241 457 aa8.14□□□□□ -1.11
CHD1-204ENST00000505982 CDCA2Q69YH5 1023 aaPredicted RBP8.14□□□□□ -1.11
CHD1-204ENST00000505982 IQCEQ6IPM2 695 aa8.14□□□□□ -1.11
CHD1-204ENST00000505982 STRA8Q7Z7C7 330 aa8.14□□□□□ -1.11
CHD1-204ENST00000505982 WNK4Q96J92 1243 aa8.14□□□□□ -1.11
CHD1-204ENST00000505982 CNTD2Q9H8S5 307 aa8.14□□□□□ -1.11
CHD1-204ENST00000505982 NPTXRO95502 500 aa8.13□□□□□ -1.11
CHD1-204ENST00000505982 CELA3BP08861 270 aa8.13□□□□□ -1.11
CHD1-204ENST00000505982 POU3F2P20265 443 aaPredicted RBP8.13□□□□□ -1.11
CHD1-204ENST00000505982 ENDOUP21128 410 aaKnown RBP8.13□□□□□ -1.11
CHD1-204ENST00000505982 EPHB3P54753 998 aa8.13□□□□□ -1.11
CHD1-204ENST00000505982 YBX1P67809 324 aaKnown RBP8.13□□□□□ -1.11
CHD1-204ENST00000505982 LAPTM5Q13571 262 aa8.13□□□□□ -1.11
CHD1-204ENST00000505982 SART3Q15020 963 aaKnown RBP8.13□□□□□ -1.11
CHD1-204ENST00000505982 RTP2Q5QGT7 225 aa8.13□□□□□ -1.11
CHD1-204ENST00000505982 ODR4Q5SWX8 454 aa8.13□□□□□ -1.11
CHD1-204ENST00000505982 ZCCHC8Q6NZY4 707 aaKnown RBP8.13□□□□□ -1.11
CHD1-204ENST00000505982 PRRT2Q7Z6L0 340 aaPredicted RBP8.13□□□□□ -1.11
CHD1-204ENST00000505982 CCDC103Q8IW40 242 aa8.13□□□□□ -1.11
CHD1-204ENST00000505982 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.13□□□□□ -1.11
CHD1-204ENST00000505982 USP7Q93009 1102 aa8.13□□□□□ -1.11
CHD1-204ENST00000505982 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.13□□□□□ -1.11
CHD1-204ENST00000505982 SAMD15Q9P1V8 674 aa8.13□□□□□ -1.11
CHD1-204ENST00000505982 FAM83GA6ND36 823 aa8.12□□□□□ -1.11
CHD1-204ENST00000505982 MYO1BO43795 1136 aa8.12□□□□□ -1.11
CHD1-204ENST00000505982 EFEMP2O95967 443 aa8.12□□□□□ -1.11
CHD1-204ENST00000505982 SRGAP2CP0DJJ0 459 aa8.12□□□□□ -1.11
CHD1-204ENST00000505982 LCP1P13796 627 aa8.12□□□□□ -1.11
CHD1-204ENST00000505982 PMLP29590 882 aa8.12□□□□□ -1.11
CHD1-204ENST00000505982 SKOR2Q2VWA4 1001 aaPredicted RBP8.12□□□□□ -1.11
CHD1-204ENST00000505982 SP8Q8IXZ3 490 aa8.12□□□□□ -1.11
CHD1-204ENST00000505982 OR2W6PQ8NHA6 318 aa8.12□□□□□ -1.11
CHD1-204ENST00000505982 CHAMP1Q96JM3 812 aa8.12□□□□□ -1.11
CHD1-204ENST00000505982 NPFFR2Q9Y5X5 522 aa8.12□□□□□ -1.11
CHD1-204ENST00000505982 FGF10O15520 208 aaPredicted RBP8.11□□□□□ -1.11
CHD1-204ENST00000505982 MSCO60682 206 aa8.11□□□□□ -1.11
CHD1-204ENST00000505982 TBC1D8O95759 1140 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms