RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 NUDT5Q9UKK9 219 aa5.84□□□□□ -1.47
TOPBP1-204ENST00000505804 PALD1Q9ULE6 856 aa5.84□□□□□ -1.47
TOPBP1-204ENST00000505804 CBLCQ9ULV8 474 aa5.84□□□□□ -1.47
TOPBP1-204ENST00000505804 TCRBV5S4A2TA0A5A2 114 aa5.83□□□□□ -1.48
TOPBP1-204ENST00000505804 ABLIM1O14639 778 aa5.83□□□□□ -1.48
TOPBP1-204ENST00000505804 GSTA4O15217 222 aa5.83□□□□□ -1.48
TOPBP1-204ENST00000505804 TADA3O75528 432 aa5.83□□□□□ -1.48
TOPBP1-204ENST00000505804 MYCLP1P12525 358 aaPredicted RBP5.83□□□□□ -1.48
TOPBP1-204ENST00000505804 PDE6AP16499 860 aa5.83□□□□□ -1.48
TOPBP1-204ENST00000505804 VIPR1P32241 457 aa5.83□□□□□ -1.48
TOPBP1-204ENST00000505804 SLC6A11P48066 632 aa5.83□□□□□ -1.48
TOPBP1-204ENST00000505804 NEK4P51957 841 aa5.83□□□□□ -1.48
TOPBP1-204ENST00000505804 SRSF3P84103 164 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-204ENST00000505804 TMEM62Q0P6H9 643 aa5.83□□□□□ -1.48
TOPBP1-204ENST00000505804 PLEKHN1Q494U1 663 aaPredicted RBP5.83□□□□□ -1.48
TOPBP1-204ENST00000505804 FAM47CQ5HY64 1035 aa5.83□□□□□ -1.48
TOPBP1-204ENST00000505804 ZCCHC8Q6NZY4 707 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-204ENST00000505804 ARHGAP36Q6ZRI8 547 aa5.83□□□□□ -1.48
TOPBP1-204ENST00000505804 TMC6Q7Z403 805 aa5.83□□□□□ -1.48
TOPBP1-204ENST00000505804 DCP2Q8IU60 420 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-204ENST00000505804 DDX1Q92499 740 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-204ENST00000505804 SEC14L1Q92503 715 aa5.83□□□□□ -1.48
TOPBP1-204ENST00000505804 AP5M1Q9H0R1 490 aa5.83□□□□□ -1.48
TOPBP1-204ENST00000505804 SAMD15Q9P1V8 674 aa5.83□□□□□ -1.48
TOPBP1-204ENST00000505804 PLA2G2DQ9UNK4 145 aa5.83□□□□□ -1.48
TOPBP1-204ENST00000505804 A0A087X0B3 334 aa5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 LOC100996750A0A140TA64 210 aa5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 MYOCOSA0A1B0GUC4 107 aa5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 FAM83GA6ND36 823 aa5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 B4E1Z4 1266 aa5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 KRIT1O00522 736 aa5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 SLC27A2O14975 620 aa5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 ZBTB7AO95365 584 aa5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 AMY2AP04746 511 aa5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 KRT15P19012 456 aa5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 AMY2BP19961 511 aa5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 MASP1P48740 699 aa5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 JAM2P57087 298 aa5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 CHRNA2Q15822 529 aa5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 CRY1Q16526 586 aa5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 CFAP100Q494V2 611 aa5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 TAF7LQ5H9L4 462 aa5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 HABP4Q5JVS0 413 aaKnown RBP5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 CDCA2Q69YH5 1023 aaPredicted RBP5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 TMEM132EQ6IEE7 984 aa5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 UBE2R2Q712K3 238 aaPredicted RBP5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 DDX53Q86TM3 631 aaKnown RBP5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 CISD2Q8N5K1 135 aaKnown RBP5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 WNK4Q96J92 1243 aa5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 TARS2Q9BW92 718 aaKnown RBP5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 KRTAP4-6Q9BYQ5 205 aa5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 EPB41L4BQ9H329 900 aa5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 SMOC1Q9H4F8 434 aa5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 SIRT5Q9NXA8 310 aa5.82□□□□□ -1.48
TOPBP1-204ENST00000505804 M0R2C6 588 aa5.81□□□□□ -1.48
TOPBP1-204ENST00000505804 KCNK3O14649 394 aa5.81□□□□□ -1.48
TOPBP1-204ENST00000505804 GLRX3O76003 335 aaKnown RBP5.81□□□□□ -1.48
TOPBP1-204ENST00000505804 FLT3P36888 993 aa5.81□□□□□ -1.48
TOPBP1-204ENST00000505804 ZNF200P98182 395 aaPredicted RBP5.81□□□□□ -1.48
TOPBP1-204ENST00000505804 SLC9A5Q14940 896 aa5.81□□□□□ -1.48
TOPBP1-204ENST00000505804 PCBP1Q15365 356 aaKnown RBP eCLIP5.81□□□□□ -1.48
TOPBP1-204ENST00000505804 GPR19Q15760 415 aa5.81□□□□□ -1.48
TOPBP1-204ENST00000505804 EMC4Q5J8M3 183 aa5.81□□□□□ -1.48
TOPBP1-204ENST00000505804 PIK3R6Q5UE93 754 aa5.81□□□□□ -1.48
TOPBP1-204ENST00000505804 OVCH1Q7RTY7 1134 aa5.81□□□□□ -1.48
TOPBP1-204ENST00000505804 ARRDC4Q8NCT1 418 aa5.81□□□□□ -1.48
TOPBP1-204ENST00000505804 SH3RF2Q8TEC5 729 aa5.81□□□□□ -1.48
TOPBP1-204ENST00000505804 CLEC4DQ8WXI8 215 aa5.81□□□□□ -1.48
TOPBP1-204ENST00000505804 TSPAN17Q96FV3 270 aa5.81□□□□□ -1.48
TOPBP1-204ENST00000505804 SGPP1Q9BX95 441 aa5.81□□□□□ -1.48
TOPBP1-204ENST00000505804 CELF4Q9BZC1 486 aaKnown RBP5.81□□□□□ -1.48
TOPBP1-204ENST00000505804 MCOLN1Q9GZU1 580 aa5.81□□□□□ -1.48
TOPBP1-204ENST00000505804 MTFR1LQ9H019 292 aa5.81□□□□□ -1.48
TOPBP1-204ENST00000505804 MYOTQ9UBF9 498 aa5.81□□□□□ -1.48
TOPBP1-204ENST00000505804 DSEQ9UL01 958 aa5.81□□□□□ -1.48
TOPBP1-204ENST00000505804 PCDHB4Q9Y5E5 795 aa5.81□□□□□ -1.48
TOPBP1-204ENST00000505804 TCRBV5S2A0A599 114 aa5.8□□□□□ -1.48
TOPBP1-204ENST00000505804 HRKO00198 91 aa5.8□□□□□ -1.48
TOPBP1-204ENST00000505804 PDE8AO60658 829 aa5.8□□□□□ -1.48
TOPBP1-204ENST00000505804 MAFKO60675 156 aa5.8□□□□□ -1.48
TOPBP1-204ENST00000505804 PEX10O60683 326 aa5.8□□□□□ -1.48
TOPBP1-204ENST00000505804 KPNA6O60684 536 aa5.8□□□□□ -1.48
TOPBP1-204ENST00000505804 NPTXRO95502 500 aa5.8□□□□□ -1.48
TOPBP1-204ENST00000505804 LTFP02788 710 aa5.8□□□□□ -1.48
TOPBP1-204ENST00000505804 NCKAP1LP55160 1127 aa5.8□□□□□ -1.48
TOPBP1-204ENST00000505804 LACTBP83111 547 aaPredicted RBP5.8□□□□□ -1.48
TOPBP1-204ENST00000505804 TMEM177Q53S58 311 aa5.8□□□□□ -1.48
TOPBP1-204ENST00000505804 OLFML2BQ68BL8 750 aa5.8□□□□□ -1.48
TOPBP1-204ENST00000505804 PTRH1Q86Y79 214 aaKnown RBP5.8□□□□□ -1.48
TOPBP1-204ENST00000505804 UHMK1Q8TAS1 419 aaKnown RBP5.8□□□□□ -1.48
TOPBP1-204ENST00000505804 ALG3Q92685 438 aa5.8□□□□□ -1.48
TOPBP1-204ENST00000505804 KCNN1Q92952 543 aa5.8□□□□□ -1.48
TOPBP1-204ENST00000505804 CD244Q9BZW8 370 aa5.8□□□□□ -1.48
TOPBP1-204ENST00000505804 SMURF1Q9HCE7 757 aa5.8□□□□□ -1.48
TOPBP1-204ENST00000505804 ZNF652Q9Y2D9 606 aa5.8□□□□□ -1.48
TOPBP1-204ENST00000505804 GSG1L2A8MUP6 293 aa5.79□□□□□ -1.48
TOPBP1-204ENST00000505804 ZNF561-AS1K7EIQ3 104 aa5.79□□□□□ -1.48
TOPBP1-204ENST00000505804 TRAF5O00463 557 aa5.79□□□□□ -1.48
TOPBP1-204ENST00000505804 POU3F2P20265 443 aaPredicted RBP5.79□□□□□ -1.48
TOPBP1-204ENST00000505804 TUSC3Q13454 348 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms