RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.63□□□□□ -1.51
MATR3-211ENST00000505625 UBL4BQ8N7F7 174 aa5.63□□□□□ -1.51
MATR3-211ENST00000505625 C12orf50Q8NA57 414 aaPredicted RBP5.63□□□□□ -1.51
MATR3-211ENST00000505625 NSUN7Q8NE18 718 aaKnown RBP5.63□□□□□ -1.51
MATR3-211ENST00000505625 RNF208Q9H0X6 261 aa5.63□□□□□ -1.51
MATR3-211ENST00000505625 CTTNBP2NLQ9P2B4 639 aa5.63□□□□□ -1.51
MATR3-211ENST00000505625 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.63□□□□□ -1.51
MATR3-211ENST00000505625 H3BRJ5 948 aa5.63□□□□□ -1.51
MATR3-211ENST00000505625 PAK2Q13177 524 aa5.63□□□□□ -1.51
MATR3-211ENST00000505625 ARMCX6Q7L4S7 300 aa5.63□□□□□ -1.51
MATR3-211ENST00000505625 TRIM59Q8IWR1 403 aa5.63□□□□□ -1.51
MATR3-211ENST00000505625 TTC8Q8TAM2 541 aa5.63□□□□□ -1.51
MATR3-211ENST00000505625 ZNF507Q8TCN5 953 aa5.63□□□□□ -1.51
MATR3-211ENST00000505625 TCP11Q8WWU5 503 aa5.63□□□□□ -1.51
MATR3-211ENST00000505625 HVCN1Q96D96 273 aa5.63□□□□□ -1.51
MATR3-211ENST00000505625 DCUN1D1Q96GG9 259 aa5.63□□□□□ -1.51
MATR3-211ENST00000505625 MPP4Q96JB8 637 aa5.63□□□□□ -1.51
MATR3-211ENST00000505625 C16orf45Q96MC5 204 aaPredicted RBP5.63□□□□□ -1.51
MATR3-211ENST00000505625 RBSNQ9H1K0 784 aa5.63□□□□□ -1.51
MATR3-211ENST00000505625 HCN4Q9Y3Q4 1203 aa5.63□□□□□ -1.51
MATR3-211ENST00000505625 PRMT3O60678 531 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 MBD3O95983 291 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 BCL2L14Q9BZR8 327 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 EVA1BQ9NVM1 165 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 N6AMT1Q9Y5N5 214 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 LOC102724428A0A0B4J2F2 783 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 MEIS1O00470 390 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 SMIM24O75264 130 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 THPOP40225 353 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 SIK1P57059 783 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 LRCH2Q5VUJ6 765 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 MICALL2Q8IY33 904 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 TAGAPQ8N103 731 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 SP110Q9HB58 689 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 C1orf112Q9NSG2 853 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 UTP11Q9Y3A2 253 aaKnown RBP5.62□□□□□ -1.51
MATR3-211ENST00000505625 IPPQ9Y573 584 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 PAMP19021 973 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 ARHGDIAP52565 204 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 PTPN14Q15678 1187 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 HADHQ16836 314 aaKnown RBP5.62□□□□□ -1.51
MATR3-211ENST00000505625 RNF207Q6ZRF8 634 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 SMIM5Q71RC9 77 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 BRINP3Q76B58 766 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 OXCT2Q9BYC2 517 aaPredicted RBP5.62□□□□□ -1.51
MATR3-211ENST00000505625 ANLNQ9NQW6 1124 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 VPS18Q9P253 973 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 SNX6Q9UNH7 406 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 ABCC1P33527 1531 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 I3L4J1 428 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 CKBP12277 381 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 DARSP14868 501 aaKnown RBP5.62□□□□□ -1.51
MATR3-211ENST00000505625 KRT15P19012 456 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 STX1AQ16623 288 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 SPDYE7PQ495Y7 208 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 TAOK1Q7L7X3 1001 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 KCTD6Q8NC69 237 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 ZC3H15Q8WU90 426 aaKnown RBP5.62□□□□□ -1.51
MATR3-211ENST00000505625 SLC7A3Q8WY07 619 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 PSMB7Q99436 277 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 GEMIN8Q9NWZ8 242 aaKnown RBP5.62□□□□□ -1.51
MATR3-211ENST00000505625 TRAF3IP3Q9Y228 551 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 RABGAP1Q9Y3P9 1069 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 IGSF1Q8N6C5 1336 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 HNRNPDLO14979 420 aaKnown RBP5.62□□□□□ -1.51
MATR3-211ENST00000505625 GMFGO60234 142 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 MYL4P12829 197 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 HLA-DPA1P20036 260 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 MX2P20592 715 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 COG7P83436 770 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 CARTPTQ16568 116 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 ALFQ53S48 1182 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 ZBTB38Q8NAP3 1195 aaPredicted RBP5.62□□□□□ -1.51
MATR3-211ENST00000505625 GPKOWQ92917 476 aaPredicted RBP eCLIP5.62□□□□□ -1.515e-8■■□□□ 12.1
MATR3-211ENST00000505625 L3MBTL3Q96JM7 780 aaPredicted RBP5.62□□□□□ -1.51
MATR3-211ENST00000505625 JPH2Q9BR39 696 aaPredicted RBP5.62□□□□□ -1.51
MATR3-211ENST00000505625 HTATIP2Q9BUP3 242 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 CASS4Q9NQ75 786 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.62□□□□□ -1.514e-7■□□□□ 9.3
MATR3-211ENST00000505625 GTF2A1LQ9UNN4 478 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 PIN4Q9Y237 131 aaKnown RBP5.62□□□□□ -1.51
MATR3-211ENST00000505625 ZNF804BA4D1E1 1349 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 ANP32DO95626 131 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 CSE1LP55060 971 aaKnown RBP5.62□□□□□ -1.51
MATR3-211ENST00000505625 TTLL4Q14679 1199 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 EML3Q32P44 896 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 SCFD1Q8WVM8 642 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 ARHGEF2Q92974 986 aaKnown RBP5.62□□□□□ -1.51
MATR3-211ENST00000505625 STMN2Q93045 179 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 PARK7Q99497 189 aaKnown RBP5.62□□□□□ -1.51
MATR3-211ENST00000505625 FSD1LQ9BXM9 530 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 VPS16Q9H269 839 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 TDRD3Q9H7E2 651 aaKnown RBP5.62□□□□□ -1.51
MATR3-211ENST00000505625 ZNF304Q9HCX3 659 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 PANK4Q9NVE7 773 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 PCDHB12Q9Y5F1 795 aa5.62□□□□□ -1.51
MATR3-211ENST00000505625 PDE6CP51160 858 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 ZC3H12BQ5HYM0 836 aaKnown RBP5.61□□□□□ -1.51
MATR3-211ENST00000505625 SLC10A5Q5PT55 438 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 SNRNP48Q6IEG0 339 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms