RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 EEPD1Q7L9B9 569 aa19.34■□□□□ 0.69
SYNE4-207ENST00000505054 FAM126BQ8IXS8 530 aa19.34■□□□□ 0.69
SYNE4-207ENST00000505054 TMEM199Q8N511 208 aa19.34■□□□□ 0.69
SYNE4-207ENST00000505054 SMARCC2Q8TAQ2 1214 aa19.34■□□□□ 0.69
SYNE4-207ENST00000505054 CUL5Q93034 780 aa19.34■□□□□ 0.69
SYNE4-207ENST00000505054 VTA1Q9NP79 307 aa19.34■□□□□ 0.69
SYNE4-207ENST00000505054 RIC8AQ9NPQ8 531 aa19.34■□□□□ 0.69
SYNE4-207ENST00000505054 TTC28Q96AY4 2481 aa19.34■□□□□ 0.69
SYNE4-207ENST00000505054 ESYT2A0FGR8 921 aa19.33■□□□□ 0.68
SYNE4-207ENST00000505054 SMCO2A6NFE2 343 aa19.33■□□□□ 0.68
SYNE4-207ENST00000505054 ADAMTS3O15072 1205 aa19.33■□□□□ 0.68
SYNE4-207ENST00000505054 ST18O60284 1047 aa19.33■□□□□ 0.68
SYNE4-207ENST00000505054 NR3C2P08235 984 aa19.33■□□□□ 0.68
SYNE4-207ENST00000505054 ADCY7P51828 1080 aa19.33■□□□□ 0.68
SYNE4-207ENST00000505054 NKX3-2P78367 333 aa19.33■□□□□ 0.68
SYNE4-207ENST00000505054 GNASQ5JWF2 1037 aa19.33■□□□□ 0.68
SYNE4-207ENST00000505054 TMEM240Q5SV17 173 aa19.33■□□□□ 0.68
SYNE4-207ENST00000505054 RASIP1Q5U651 963 aa19.33■□□□□ 0.68
SYNE4-207ENST00000505054 TAPT1Q6NXT6 567 aa19.33■□□□□ 0.68
SYNE4-207ENST00000505054 USP38Q8NB14 1042 aa19.33■□□□□ 0.68
SYNE4-207ENST00000505054 NSUN7Q8NE18 718 aaKnown RBP19.33■□□□□ 0.68
SYNE4-207ENST00000505054 VTI1AQ96AJ9 217 aa19.33■□□□□ 0.68
SYNE4-207ENST00000505054 AIFM3Q96NN9 605 aa19.33■□□□□ 0.68
SYNE4-207ENST00000505054 IWS1Q96ST2 819 aa19.33■□□□□ 0.68
SYNE4-207ENST00000505054 MPHOSPH6Q99547 160 aaKnown RBP19.33■□□□□ 0.68
SYNE4-207ENST00000505054 PDGFCQ9NRA1 345 aa19.33■□□□□ 0.68
SYNE4-207ENST00000505054 VPS54Q9P1Q0 977 aa19.33■□□□□ 0.68
SYNE4-207ENST00000505054 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.32■□□□□ 0.68
SYNE4-207ENST00000505054 CSF2RAP15509 400 aa19.32■□□□□ 0.68
SYNE4-207ENST00000505054 PGM5Q15124 567 aa19.32■□□□□ 0.68
SYNE4-207ENST00000505054 TJAP1Q5JTD0 557 aa19.32■□□□□ 0.68
SYNE4-207ENST00000505054 C16orf59Q7L2K0 433 aa19.32■□□□□ 0.68
SYNE4-207ENST00000505054 CCDC83Q8IWF9 413 aa19.32■□□□□ 0.68
SYNE4-207ENST00000505054 IL27Q8NEV9 243 aa19.32■□□□□ 0.68
SYNE4-207ENST00000505054 ZSCAN31Q96LW9 406 aaPredicted RBP19.32■□□□□ 0.68
SYNE4-207ENST00000505054 PBX4Q9BYU1 374 aa19.32■□□□□ 0.68
SYNE4-207ENST00000505054 PPP1R12CQ9BZL4 782 aa19.32■□□□□ 0.68
SYNE4-207ENST00000505054 ZMYND12Q9H0C1 365 aa19.32■□□□□ 0.68
SYNE4-207ENST00000505054 PRDM6Q9NQX0 595 aa19.32■□□□□ 0.68
SYNE4-207ENST00000505054 B4DLN1 442 aa19.31■□□□□ 0.68
SYNE4-207ENST00000505054 CTAGE5O15320 804 aa19.31■□□□□ 0.68
SYNE4-207ENST00000505054 JAK2O60674 1132 aa19.31■□□□□ 0.68
SYNE4-207ENST00000505054 FDPSP14324 419 aaKnown RBP19.31■□□□□ 0.68
SYNE4-207ENST00000505054 MRPL12P52815 198 aaKnown RBP19.31■□□□□ 0.68
SYNE4-207ENST00000505054 TMEM63BQ5T3F8 832 aa19.31■□□□□ 0.68
SYNE4-207ENST00000505054 TEX2Q8IWB9 1127 aa19.31■□□□□ 0.68
SYNE4-207ENST00000505054 CCDC12Q8WUD4 166 aaPredicted RBP19.31■□□□□ 0.68
SYNE4-207ENST00000505054 GAS2L1Q99501 681 aaPredicted RBP19.31■□□□□ 0.68
SYNE4-207ENST00000505054 SH3GLB2Q9NR46 395 aa19.31■□□□□ 0.68
SYNE4-207ENST00000505054 SH2B1Q9NRF2 756 aaPredicted RBP19.31■□□□□ 0.68
SYNE4-207ENST00000505054 ORC3Q9UBD5 711 aaPredicted RBP19.31■□□□□ 0.68
SYNE4-207ENST00000505054 MYO9BQ13459 2157 aa19.31■□□□□ 0.68
SYNE4-207ENST00000505054 RBM47A0AV96 593 aaKnown RBP19.3■□□□□ 0.68
SYNE4-207ENST00000505054 CD4P01730 458 aa19.3■□□□□ 0.68
SYNE4-207ENST00000505054 PTGS1P23219 599 aa19.3■□□□□ 0.68
SYNE4-207ENST00000505054 CLK2P49760 499 aaKnown RBP19.3■□□□□ 0.68
SYNE4-207ENST00000505054 STXBP2Q15833 593 aa19.3■□□□□ 0.68
SYNE4-207ENST00000505054 VSIG10LQ86VR7 867 aa19.3■□□□□ 0.68
SYNE4-207ENST00000505054 CCDC148Q8NFR7 591 aa19.3■□□□□ 0.68
SYNE4-207ENST00000505054 TMEM260Q9NX78 707 aa19.3■□□□□ 0.68
SYNE4-207ENST00000505054 CABYRO75952 493 aa19.29■□□□□ 0.68
SYNE4-207ENST00000505054 RGS20O76081 388 aa19.29■□□□□ 0.68
SYNE4-207ENST00000505054 MYCLP12524 364 aaPredicted RBP19.29■□□□□ 0.68
SYNE4-207ENST00000505054 SMPD1P17405 629 aa19.29■□□□□ 0.68
SYNE4-207ENST00000505054 PBX2P40425 430 aa19.29■□□□□ 0.68
SYNE4-207ENST00000505054 BEX3Q00994 111 aa19.29■□□□□ 0.68
SYNE4-207ENST00000505054 TNFAIP2Q03169 654 aa19.29■□□□□ 0.68
SYNE4-207ENST00000505054 ZNF365Q70YC5 407 aa19.29■□□□□ 0.68
SYNE4-207ENST00000505054 TLK2Q86UE8 772 aa19.29■□□□□ 0.68
SYNE4-207ENST00000505054 SLC43A3Q8NBI5 491 aa19.29■□□□□ 0.68
SYNE4-207ENST00000505054 PGBD1Q96JS3 809 aa19.29■□□□□ 0.68
SYNE4-207ENST00000505054 GLT8D2Q9H1C3 349 aa19.29■□□□□ 0.68
SYNE4-207ENST00000505054 C6orf50Q9HD87 102 aa19.29■□□□□ 0.68
SYNE4-207ENST00000505054 IL23AQ9NPF7 189 aa19.29■□□□□ 0.68
SYNE4-207ENST00000505054 PCDHA6Q9UN73 950 aa19.29■□□□□ 0.68
SYNE4-207ENST00000505054 PCDHA8Q9Y5H6 950 aa19.29■□□□□ 0.68
SYNE4-207ENST00000505054 MUC3AQ02505 3323 aa19.28■□□□□ 0.68
SYNE4-207ENST00000505054 CHD9Q3L8U1 2897 aa19.28■□□□□ 0.68
SYNE4-207ENST00000505054 SPDYE3A6NKU9 549 aa19.28■□□□□ 0.68
SYNE4-207ENST00000505054 GRXCR1A8MXD5 290 aa19.28■□□□□ 0.68
SYNE4-207ENST00000505054 EIF3JO75822 258 aaKnown RBP19.28■□□□□ 0.68
SYNE4-207ENST00000505054 ACRP10323 421 aa19.28■□□□□ 0.68
SYNE4-207ENST00000505054 CCND2P30279 289 aa19.28■□□□□ 0.68
SYNE4-207ENST00000505054 MRPS9P82933 396 aaKnown RBP19.28■□□□□ 0.68
SYNE4-207ENST00000505054 NPY5RQ15761 445 aa19.28■□□□□ 0.68
SYNE4-207ENST00000505054 RAB30Q15771 203 aa19.28■□□□□ 0.68
SYNE4-207ENST00000505054 IQSEC1Q6DN90 963 aa19.28■□□□□ 0.68
SYNE4-207ENST00000505054 SCFD2Q8WU76 684 aa19.28■□□□□ 0.68
SYNE4-207ENST00000505054 TMX3Q96JJ7 454 aa19.28■□□□□ 0.68
SYNE4-207ENST00000505054 ZFP91Q96JP5 570 aaPredicted RBP19.28■□□□□ 0.68
SYNE4-207ENST00000505054 SEZ6LQ9BYH1 1024 aa19.28■□□□□ 0.68
SYNE4-207ENST00000505054 ANO3Q9BYT9 981 aa19.28■□□□□ 0.68
SYNE4-207ENST00000505054 WDR11Q9BZH6 1224 aa19.28■□□□□ 0.68
SYNE4-207ENST00000505054 MTIF3Q9H2K0 278 aaKnown RBP19.28■□□□□ 0.68
SYNE4-207ENST00000505054 GJB4Q9NTQ9 266 aa19.28■□□□□ 0.68
SYNE4-207ENST00000505054 GNEQ9Y223 722 aaKnown RBP19.28■□□□□ 0.68
SYNE4-207ENST00000505054 ARIH2O95376 493 aa19.27■□□□□ 0.68
SYNE4-207ENST00000505054 GNA11P29992 359 aa19.27■□□□□ 0.68
SYNE4-207ENST00000505054 MCM2P49736 904 aa19.27■□□□□ 0.68
SYNE4-207ENST00000505054 AP3B2Q13367 1082 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms