RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 MYSM1Q5VVJ2 828 aa24.29■■□□□ 1.48
TRAPPC11-203ENST00000504526 NFRKBQ6P4R8 1299 aa24.29■■□□□ 1.48
TRAPPC11-203ENST00000504526 CCDC12Q8WUD4 166 aaPredicted RBP24.29■■□□□ 1.48
TRAPPC11-203ENST00000504526 RNF26Q9BY78 433 aaPredicted RBP24.29■■□□□ 1.48
TRAPPC11-203ENST00000504526 ALDH8A1Q9H2A2 487 aaPredicted RBP24.29■■□□□ 1.48
TRAPPC11-203ENST00000504526 PCDHA6Q9UN73 950 aa24.29■■□□□ 1.48
TRAPPC11-203ENST00000504526 PCDHA8Q9Y5H6 950 aa24.29■■□□□ 1.48
TRAPPC11-203ENST00000504526 SMCO2A6NFE2 343 aa24.28■■□□□ 1.48
TRAPPC11-203ENST00000504526 SPATA31C2B4DYI2 1134 aa24.28■■□□□ 1.48
TRAPPC11-203ENST00000504526 IFNAR1P17181 557 aa24.28■■□□□ 1.48
TRAPPC11-203ENST00000504526 ITGB8P26012 769 aa24.28■■□□□ 1.48
TRAPPC11-203ENST00000504526 TYW1BQ6NUM6 668 aa24.28■■□□□ 1.48
TRAPPC11-203ENST00000504526 ZFP91Q96JP5 570 aaPredicted RBP24.28■■□□□ 1.48
TRAPPC11-203ENST00000504526 CDHR1Q96JP9 859 aa24.28■■□□□ 1.48
TRAPPC11-203ENST00000504526 MLXIPQ9HAP2 919 aa24.28■■□□□ 1.48
TRAPPC11-203ENST00000504526 RTEL1Q9NZ71 1219 aa24.28■■□□□ 1.48
TRAPPC11-203ENST00000504526 AP3B2Q13367 1082 aa24.27■■□□□ 1.48
TRAPPC11-203ENST00000504526 NTRK3Q16288 839 aa24.27■■□□□ 1.48
TRAPPC11-203ENST00000504526 NBPF20Q3BBV1 942 aa24.27■■□□□ 1.48
TRAPPC11-203ENST00000504526 LRIT3Q3SXY7 679 aa24.27■■□□□ 1.48
TRAPPC11-203ENST00000504526 GPRASP2Q96D09 838 aa24.27■■□□□ 1.48
TRAPPC11-203ENST00000504526 SPATA33Q96N06 139 aa24.27■■□□□ 1.48
TRAPPC11-203ENST00000504526 SENP7Q9BQF6 1050 aa24.27■■□□□ 1.48
TRAPPC11-203ENST00000504526 KATNAL1Q9BW62 490 aa24.27■■□□□ 1.48
TRAPPC11-203ENST00000504526 ESYT2A0FGR8 921 aa24.26■■□□□ 1.47
TRAPPC11-203ENST00000504526 B4GALT4O60513 344 aa24.26■■□□□ 1.47
TRAPPC11-203ENST00000504526 PPFIA4O75335 1185 aa24.26■■□□□ 1.47
TRAPPC11-203ENST00000504526 HOXD8P13378 290 aaPredicted RBP24.26■■□□□ 1.47
TRAPPC11-203ENST00000504526 CCT2P78371 535 aaKnown RBP24.26■■□□□ 1.47
TRAPPC11-203ENST00000504526 SP2Q02086 613 aa24.26■■□□□ 1.47
TRAPPC11-203ENST00000504526 FPGSQ05932 587 aa24.26■■□□□ 1.47
TRAPPC11-203ENST00000504526 FAM47CQ5HY64 1035 aa24.26■■□□□ 1.47
TRAPPC11-203ENST00000504526 MCTP2Q6DN12 878 aa24.26■■□□□ 1.47
TRAPPC11-203ENST00000504526 MFSD5Q6N075 450 aa24.26■■□□□ 1.47
TRAPPC11-203ENST00000504526 GIMAP8Q8ND71 665 aaPredicted RBP24.26■■□□□ 1.47
TRAPPC11-203ENST00000504526 IL17RAQ96F46 866 aa24.26■■□□□ 1.47
TRAPPC11-203ENST00000504526 TRPV6Q9H1D0 765 aa24.26■■□□□ 1.47
TRAPPC11-203ENST00000504526 SCN10AQ9Y5Y9 1956 aa24.25■■□□□ 1.47
TRAPPC11-203ENST00000504526 CPLX2Q6PUV4 134 aaKnown RBP24.25■■□□□ 1.47
TRAPPC11-203ENST00000504526 METTL7BQ6UX53 244 aa24.25■■□□□ 1.47
TRAPPC11-203ENST00000504526 TRIM22Q8IYM9 498 aa24.25■■□□□ 1.47
TRAPPC11-203ENST00000504526 TMEM199Q8N511 208 aa24.25■■□□□ 1.47
TRAPPC11-203ENST00000504526 PHKBQ93100 1093 aa24.25■■□□□ 1.47
TRAPPC11-203ENST00000504526 HIPK3Q9H422 1215 aa24.25■■□□□ 1.47
TRAPPC11-203ENST00000504526 NCOA5Q9HCD5 579 aaKnown RBP24.25■■□□□ 1.47
TRAPPC11-203ENST00000504526 C6orf50Q9HD87 102 aa24.25■■□□□ 1.47
TRAPPC11-203ENST00000504526 CPLX1O14810 134 aa24.24■■□□□ 1.47
TRAPPC11-203ENST00000504526 MAFGO15525 162 aa24.24■■□□□ 1.47
TRAPPC11-203ENST00000504526 SEMA3FQ13275 785 aa24.24■■□□□ 1.47
TRAPPC11-203ENST00000504526 ANKRD1Q15327 319 aa24.24■■□□□ 1.47
TRAPPC11-203ENST00000504526 PKN1Q16512 942 aa24.24■■□□□ 1.47
TRAPPC11-203ENST00000504526 HSDL1Q3SXM5 330 aa24.24■■□□□ 1.47
TRAPPC11-203ENST00000504526 SESTD1Q86VW0 696 aa24.24■■□□□ 1.47
TRAPPC11-203ENST00000504526 KAT2BQ92831 832 aa24.24■■□□□ 1.47
TRAPPC11-203ENST00000504526 SLC26A6Q9BXS9 759 aa24.24■■□□□ 1.47
TRAPPC11-203ENST00000504526 ZMYND12Q9H0C1 365 aa24.24■■□□□ 1.47
TRAPPC11-203ENST00000504526 UBIAD1Q9Y5Z9 338 aa24.24■■□□□ 1.47
TRAPPC11-203ENST00000504526 NOP56O00567 594 aaKnown RBP24.23■■□□□ 1.47
TRAPPC11-203ENST00000504526 F2P00734 622 aa24.23■■□□□ 1.47
TRAPPC11-203ENST00000504526 GNA11P29992 359 aa24.23■■□□□ 1.47
TRAPPC11-203ENST00000504526 CLK2P49760 499 aaKnown RBP24.23■■□□□ 1.47
TRAPPC11-203ENST00000504526 PPIGQ13427 754 aaKnown RBP eCLIP24.23■■□□□ 1.47
TRAPPC11-203ENST00000504526 CCDC148Q8NFR7 591 aa24.23■■□□□ 1.47
TRAPPC11-203ENST00000504526 ANO3Q9BYT9 981 aa24.23■■□□□ 1.47
TRAPPC11-203ENST00000504526 PPP1R12CQ9BZL4 782 aa24.23■■□□□ 1.47
TRAPPC11-203ENST00000504526 RANBP2P49792 3224 aaKnown RBP24.23■■□□□ 1.47
TRAPPC11-203ENST00000504526 ITGB5P18084 799 aa24.22■■□□□ 1.47
TRAPPC11-203ENST00000504526 NOC4LQ9BVI4 516 aaKnown RBP24.22■■□□□ 1.47
TRAPPC11-203ENST00000504526 JADE2Q9NQC1 790 aa24.22■■□□□ 1.47
TRAPPC11-203ENST00000504526 TRMT13Q9NUP7 481 aaKnown RBP24.22■■□□□ 1.47
TRAPPC11-203ENST00000504526 SORBS3O60504 671 aa24.21■■□□□ 1.47
TRAPPC11-203ENST00000504526 PSEN2P49810 448 aa24.21■■□□□ 1.47
TRAPPC11-203ENST00000504526 CHMP4BP1P59074 171 aa24.21■■□□□ 1.47
TRAPPC11-203ENST00000504526 SSRP1Q08945 709 aaKnown RBP24.21■■□□□ 1.47
TRAPPC11-203ENST00000504526 MTMR1Q13613 665 aa24.21■■□□□ 1.47
TRAPPC11-203ENST00000504526 MFSD10Q14728 455 aa24.21■■□□□ 1.47
TRAPPC11-203ENST00000504526 SHHQ15465 462 aa24.21■■□□□ 1.47
TRAPPC11-203ENST00000504526 CYFIP1Q7L576 1253 aa24.21■■□□□ 1.47
TRAPPC11-203ENST00000504526 BICD2Q8TD16 824 aa24.21■■□□□ 1.47
TRAPPC11-203ENST00000504526 SH3GLB2Q9NR46 395 aa24.21■■□□□ 1.47
TRAPPC11-203ENST00000504526 NOD1Q9Y239 953 aa24.21■■□□□ 1.47
TRAPPC11-203ENST00000504526 HAS3O00219 553 aa24.2■■□□□ 1.46
TRAPPC11-203ENST00000504526 CYP2C18P33260 490 aa24.2■■□□□ 1.46
TRAPPC11-203ENST00000504526 SREBF1P36956 1147 aa24.2■■□□□ 1.46
TRAPPC11-203ENST00000504526 C7orf31Q8N865 590 aa24.2■■□□□ 1.46
TRAPPC11-203ENST00000504526 MXRA8Q9BRK3 442 aa24.2■■□□□ 1.46
TRAPPC11-203ENST00000504526 LARP6Q9BRS8 491 aaKnown RBP24.2■■□□□ 1.46
TRAPPC11-203ENST00000504526 CDKL5O76039 1030 aa24.19■■□□□ 1.46
TRAPPC11-203ENST00000504526 DEXIO95424 95 aa24.19■■□□□ 1.46
TRAPPC11-203ENST00000504526 ZNF286BP0CG31 522 aa24.19■■□□□ 1.46
TRAPPC11-203ENST00000504526 STK3Q13188 491 aa24.19■■□□□ 1.46
TRAPPC11-203ENST00000504526 KIAA0753Q2KHM9 967 aa24.19■■□□□ 1.46
TRAPPC11-203ENST00000504526 C9orf50Q5SZB4 431 aa24.19■■□□□ 1.46
TRAPPC11-203ENST00000504526 GPR153Q6NV75 609 aa24.19■■□□□ 1.46
TRAPPC11-203ENST00000504526 FAM177A1Q8N128 213 aaPredicted RBP24.19■■□□□ 1.46
TRAPPC11-203ENST00000504526 REXO1Q8N1G1 1221 aaKnown RBP24.19■■□□□ 1.46
TRAPPC11-203ENST00000504526 GPR20Q99678 358 aa24.19■■□□□ 1.46
TRAPPC11-203ENST00000504526 SLKQ9H2G2 1235 aaPredicted RBP24.19■■□□□ 1.46
TRAPPC11-203ENST00000504526 TMEM260Q9NX78 707 aa24.19■■□□□ 1.46
TRAPPC11-203ENST00000504526 MYH7BA7E2Y1 1941 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms