RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 OVCH2Q7RTZ1 564 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 ANKRD52Q8NB46 1076 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 TEKT5Q96M29 485 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 NMRK2Q9NPI5 230 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 STAP2Q9UGK3 403 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 ZNF214Q9UL59 606 aaPredicted RBP6.04□□□□□ -1.44
NIPBL-204ENST00000504430 APOBEC2Q9Y235 224 aaKnown RBP6.04□□□□□ -1.44
NIPBL-204ENST00000504430 INVSQ9Y283 1065 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 SIAH2O43255 324 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 SLITRK5O94991 958 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 ASLP04424 464 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 HSPA6P17066 643 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 PPM1AP35813 382 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 PIK3CBP42338 1070 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 NAP1L1P55209 391 aaKnown RBP6.04□□□□□ -1.44
NIPBL-204ENST00000504430 MAP7Q14244 749 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 TLDC1Q6P9B6 456 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 CATSPER4Q7RTX7 472 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 FCHSD1Q86WN1 690 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 CAMKK1Q8N5S9 505 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 SPATA5Q8NB90 893 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 RIPOR3Q96MK2 946 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 DHX36Q9H2U1 1008 aaKnown RBP6.04□□□□□ -1.44
NIPBL-204ENST00000504430 DIAPH3Q9NSV4 1193 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 GMIPQ9P107 970 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 PA2G4Q9UQ80 394 aaKnown RBP6.04□□□□□ -1.44
NIPBL-204ENST00000504430 A0A1W2PNR3 127 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 POTEB3A0JP26 581 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 FAM205CA6NFA0 338 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 FSCN2O14926 492 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 SRGAP2CP0DJJ0 459 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 NPTX2P47972 431 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 SUMO1P63165 101 aaKnown RBP6.04□□□□□ -1.44
NIPBL-204ENST00000504430 TRIM61Q5EBN2 209 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 SPATA1Q5VX52 437 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 SHQ1Q6PI26 577 aaKnown RBP6.04□□□□□ -1.44
NIPBL-204ENST00000504430 LRFN4Q6PJG9 635 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 POTEBQ6S5H4 581 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.04□□□□□ -1.44
NIPBL-204ENST00000504430 ADAMTS18Q8TE60 1221 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 UCMAQ8WVF2 138 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 STK26Q9P289 416 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 XPO7Q9UIA9 1087 aaKnown RBP6.04□□□□□ -1.44
NIPBL-204ENST00000504430 SRPK3Q9UPE1 567 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 PCDHGB2Q9Y5G2 931 aa6.04□□□□□ -1.44
NIPBL-204ENST00000504430 DCDC2BA2VCK2 349 aa6.03□□□□□ -1.44
NIPBL-204ENST00000504430 IPO5O00410 1097 aaKnown RBP6.03□□□□□ -1.44
NIPBL-204ENST00000504430 DDX3XO00571 662 aaKnown RBP eCLIP6.03□□□□□ -1.44
NIPBL-204ENST00000504430 CTSOP43234 321 aaPredicted RBP6.03□□□□□ -1.44
NIPBL-204ENST00000504430 TERF2Q15554 542 aa6.03□□□□□ -1.44
NIPBL-204ENST00000504430 MEA1Q16626 185 aa6.03□□□□□ -1.44
NIPBL-204ENST00000504430 CCDC84Q86UT8 332 aaPredicted RBP6.03□□□□□ -1.44
NIPBL-204ENST00000504430 ARHGEF25Q86VW2 580 aa6.03□□□□□ -1.44
NIPBL-204ENST00000504430 ANKRD13BQ86YJ7 626 aa6.03□□□□□ -1.44
NIPBL-204ENST00000504430 SMARCC1Q92922 1105 aaPredicted RBP6.03□□□□□ -1.44
NIPBL-204ENST00000504430 RILPL2Q969X0 211 aa6.03□□□□□ -1.44
NIPBL-204ENST00000504430 ACSBG1Q96GR2 724 aa6.03□□□□□ -1.44
NIPBL-204ENST00000504430 NT5C1BQ96P26 610 aa6.03□□□□□ -1.44
NIPBL-204ENST00000504430 PCGF6Q9BYE7 350 aa6.03□□□□□ -1.44
NIPBL-204ENST00000504430 ATP6V0A4Q9HBG4 840 aa6.03□□□□□ -1.44
NIPBL-204ENST00000504430 GPR34Q9UPC5 381 aa6.03□□□□□ -1.44
NIPBL-204ENST00000504430 GPRASP1Q5JY77 1395 aa6.03□□□□□ -1.44
NIPBL-204ENST00000504430 RNF223E7ERA6 249 aa6.03□□□□□ -1.44
NIPBL-204ENST00000504430 KCNA6P17658 529 aa6.03□□□□□ -1.44
NIPBL-204ENST00000504430 ACTN2P35609 894 aa6.03□□□□□ -1.44
NIPBL-204ENST00000504430 PEX19P40855 299 aa6.03□□□□□ -1.44
NIPBL-204ENST00000504430 CCDC38Q502W7 563 aa6.03□□□□□ -1.44
NIPBL-204ENST00000504430 HSP90AB3PQ58FF7 597 aa6.03□□□□□ -1.44
NIPBL-204ENST00000504430 OR2C3Q8N628 320 aa6.03□□□□□ -1.44
NIPBL-204ENST00000504430 OR8H1Q8NGG4 311 aa6.03□□□□□ -1.44
NIPBL-204ENST00000504430 ZSCAN18Q8TBC5 510 aaPredicted RBP6.03□□□□□ -1.44
NIPBL-204ENST00000504430 MAGEB10Q96LZ2 347 aaPredicted RBP6.03□□□□□ -1.44
NIPBL-204ENST00000504430 RMDN3Q96TC7 470 aa6.03□□□□□ -1.44
NIPBL-204ENST00000504430 POP1Q99575 1024 aaKnown RBP6.03□□□□□ -1.44
NIPBL-204ENST00000504430 PGPEP1Q9NXJ5 209 aa6.03□□□□□ -1.44
NIPBL-204ENST00000504430 DCDC2CA8MYV0 355 aa6.02□□□□□ -1.44
NIPBL-204ENST00000504430 CNOT4O95628 575 aaKnown RBP6.02□□□□□ -1.44
NIPBL-204ENST00000504430 CYP11A1P05108 521 aa6.02□□□□□ -1.44
NIPBL-204ENST00000504430 YARSP54577 528 aaKnown RBP6.02□□□□□ -1.44
NIPBL-204ENST00000504430 LRRC32Q14392 662 aa6.02□□□□□ -1.44
NIPBL-204ENST00000504430 BROXQ5VW32 411 aa6.02□□□□□ -1.44
NIPBL-204ENST00000504430 PMEPA1Q969W9 287 aa6.02□□□□□ -1.44
NIPBL-204ENST00000504430 SIL1Q9H173 461 aa6.02□□□□□ -1.44
NIPBL-204ENST00000504430 ACAD9Q9H845 621 aa6.02□□□□□ -1.44
NIPBL-204ENST00000504430 GFRA2O00451 464 aa6.02□□□□□ -1.45
NIPBL-204ENST00000504430 ERC2O15083 957 aa6.02□□□□□ -1.45
NIPBL-204ENST00000504430 ZEB2O60315 1214 aa6.02□□□□□ -1.45
NIPBL-204ENST00000504430 TGDSO95455 350 aa6.02□□□□□ -1.45
NIPBL-204ENST00000504430 KIF5BP33176 963 aa6.02□□□□□ -1.45
NIPBL-204ENST00000504430 LIFRP42702 1097 aa6.02□□□□□ -1.45
NIPBL-204ENST00000504430 HMGN5P82970 282 aaKnown RBP6.02□□□□□ -1.45
NIPBL-204ENST00000504430 GALNT1Q10472 559 aaPredicted RBP6.02□□□□□ -1.45
NIPBL-204ENST00000504430 NNTQ13423 1086 aa6.02□□□□□ -1.45
NIPBL-204ENST00000504430 SHROOM1Q2M3G4 852 aaPredicted RBP6.02□□□□□ -1.45
NIPBL-204ENST00000504430 PDZD4Q76G19 769 aaPredicted RBP6.02□□□□□ -1.45
NIPBL-204ENST00000504430 C12orf40Q86WS4 652 aa6.02□□□□□ -1.45
NIPBL-204ENST00000504430 KCTD13Q8WZ19 329 aa6.02□□□□□ -1.45
NIPBL-204ENST00000504430 MRGPRX2Q96LB1 330 aa6.02□□□□□ -1.45
NIPBL-204ENST00000504430 ZIC2O95409 532 aaPredicted RBP6.02□□□□□ -1.45
NIPBL-204ENST00000504430 NME2P22392 152 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms