RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 PLA2G4DQ86XP0 818 aa15.09■□□□□ 0.01
PDLIM7-212ENST00000504380 GJA10Q969M2 543 aa15.09■□□□□ 0.01
PDLIM7-212ENST00000504380 INPP4AQ96PE3 977 aaPredicted RBP15.09■□□□□ 0.01
PDLIM7-212ENST00000504380 DAXXQ9UER7 740 aaPredicted RBP15.09■□□□□ 0.01
PDLIM7-212ENST00000504380 MRVI1Q9Y6F6 885 aa15.09■□□□□ 0.01
PDLIM7-212ENST00000504380 IGLV3-22A0A075B6J6 115 aa15.08■□□□□ 0
PDLIM7-212ENST00000504380 SPATA31C2B4DYI2 1134 aa15.08■□□□□ 0
PDLIM7-212ENST00000504380 MEIS1O00470 390 aa15.08■□□□□ 0
PDLIM7-212ENST00000504380 SEPT4O43236 478 aa15.08■□□□□ 0
PDLIM7-212ENST00000504380 SLC37A4O43826 429 aa15.08■□□□□ 0
PDLIM7-212ENST00000504380 CCNT1O60563 726 aaKnown RBP15.08■□□□□ 0
PDLIM7-212ENST00000504380 ATP9AO75110 1047 aa15.08■□□□□ 0
PDLIM7-212ENST00000504380 AKR1A1P14550 325 aa15.08■□□□□ 0
PDLIM7-212ENST00000504380 CIITAP33076 1130 aa15.08■□□□□ 0
PDLIM7-212ENST00000504380 TOB1P50616 345 aaPredicted RBP15.08■□□□□ 0
PDLIM7-212ENST00000504380 USP11P51784 963 aa15.08■□□□□ 0
PDLIM7-212ENST00000504380 ZNF174Q15697 407 aa15.08■□□□□ 0
PDLIM7-212ENST00000504380 CEP55Q53EZ4 464 aa15.08■□□□□ 0
PDLIM7-212ENST00000504380 IQSEC1Q6DN90 963 aa15.08■□□□□ 0
PDLIM7-212ENST00000504380 CCDC62Q6P9F0 684 aa15.08■□□□□ 0
PDLIM7-212ENST00000504380 NLRX1Q86UT6 975 aa15.08■□□□□ 0
PDLIM7-212ENST00000504380 SCFD2Q8WU76 684 aa15.08■□□□□ 0
PDLIM7-212ENST00000504380 DEFB118Q96PH6 123 aa15.08■□□□□ 0
PDLIM7-212ENST00000504380 DDX20Q9UHI6 824 aaKnown RBP15.08■□□□□ 0
PDLIM7-212ENST00000504380 NRBP1Q9UHY1 535 aa15.08■□□□□ 0
PDLIM7-212ENST00000504380 TELO2Q9Y4R8 837 aa15.08■□□□□ 0
PDLIM7-212ENST00000504380 DOCK5Q9H7D0 1870 aa15.08■□□□□ 0
PDLIM7-212ENST00000504380 POTEFA5A3E0 1075 aa15.07■□□□□ 0
PDLIM7-212ENST00000504380 DYNC1LI2O43237 492 aaPredicted RBP15.07■□□□□ 0
PDLIM7-212ENST00000504380 FIBPO43427 364 aa15.07■□□□□ 0
PDLIM7-212ENST00000504380 STAM2O75886 525 aa15.07■□□□□ 0
PDLIM7-212ENST00000504380 MYCNP04198 464 aaPredicted RBP15.07■□□□□ 0
PDLIM7-212ENST00000504380 MTMR1Q13613 665 aa15.07■□□□□ 0
PDLIM7-212ENST00000504380 TTLL4Q14679 1199 aa15.07■□□□□ 0
PDLIM7-212ENST00000504380 FOXD4L6Q3SYB3 417 aaPredicted RBP15.07■□□□□ 0
PDLIM7-212ENST00000504380 GNPTABQ3T906 1256 aa15.07■□□□□ 0
PDLIM7-212ENST00000504380 LHX8Q68G74 356 aa15.07■□□□□ 0
PDLIM7-212ENST00000504380 FOXD4L3Q6VB84 417 aaPredicted RBP15.07■□□□□ 0
PDLIM7-212ENST00000504380 LENG9Q96B70 501 aa15.07■□□□□ 0
PDLIM7-212ENST00000504380 GPRASP2Q96D09 838 aa15.07■□□□□ 0
PDLIM7-212ENST00000504380 KCNH7Q9NS40 1196 aa15.07■□□□□ 0
PDLIM7-212ENST00000504380 DDX41Q9UJV9 622 aaKnown RBP15.07■□□□□ 0
PDLIM7-212ENST00000504380 ZDHHC9Q9Y397 364 aa15.07■□□□□ 0
PDLIM7-212ENST00000504380 PGK1P00558 417 aa15.06■□□□□ 0
PDLIM7-212ENST00000504380 ZSCAN22P10073 491 aaPredicted RBP15.06■□□□□ 0
PDLIM7-212ENST00000504380 UBA1P22314 1058 aaKnown RBP15.06■□□□□ 0
PDLIM7-212ENST00000504380 ICAM3P32942 547 aa15.06■□□□□ 0
PDLIM7-212ENST00000504380 MCM7P33993 719 aa15.06■□□□□ 0
PDLIM7-212ENST00000504380 TTC38Q5R3I4 469 aa15.06■□□□□ 0
PDLIM7-212ENST00000504380 AGO4Q9HCK5 861 aaKnown RBP15.06■□□□□ 0
PDLIM7-212ENST00000504380 PAK6Q9NQU5 681 aaPredicted RBP15.06■□□□□ 0
PDLIM7-212ENST00000504380 DDX25Q9UHL0 483 aaKnown RBP15.06■□□□□ 0
PDLIM7-212ENST00000504380 GNEQ9Y223 722 aaKnown RBP15.06■□□□□ 0
PDLIM7-212ENST00000504380 PCDHB6Q9Y5E3 794 aa15.06■□□□□ 0
PDLIM7-212ENST00000504380 HTTP42858 3142 aa15.05■□□□□ -0
PDLIM7-212ENST00000504380 CYP3A7-CYP3A51PA0A087WV96 503 aa15.05■□□□□ -0
PDLIM7-212ENST00000504380 MYADML2A6NDP7 307 aa15.05■□□□□ -0
PDLIM7-212ENST00000504380 DDX39AO00148 427 aaKnown RBP15.05■□□□□ -0
PDLIM7-212ENST00000504380 MSH4O15457 936 aa15.05■□□□□ -0
PDLIM7-212ENST00000504380 GGPS1O95749 300 aa15.05■□□□□ -0
PDLIM7-212ENST00000504380 RARBP10826 455 aa15.05■□□□□ -0
PDLIM7-212ENST00000504380 KCNA2P16389 499 aa15.05■□□□□ -0
PDLIM7-212ENST00000504380 CYP3A7P24462 503 aa15.05■□□□□ -0
PDLIM7-212ENST00000504380 BEX3Q00994 111 aa15.05■□□□□ -0
PDLIM7-212ENST00000504380 SP4Q02446 784 aa15.05■□□□□ -0
PDLIM7-212ENST00000504380 ITGB3BPQ13352 177 aaPredicted RBP15.05■□□□□ -0
PDLIM7-212ENST00000504380 Q4G0T1 1027 aa15.05■□□□□ -0
PDLIM7-212ENST00000504380 DUSP28Q4G0W2 176 aa15.05■□□□□ -0
PDLIM7-212ENST00000504380 NIPA1Q7RTP0 329 aa15.05■□□□□ -0
PDLIM7-212ENST00000504380 POTEDQ86YR6 584 aa15.05■□□□□ -0
PDLIM7-212ENST00000504380 OR6J1Q8NGC5 347 aa15.05■□□□□ -0
PDLIM7-212ENST00000504380 MBOAT7Q96N66 472 aa15.05■□□□□ -0
PDLIM7-212ENST00000504380 TMEM60Q9H2L4 133 aa15.05■□□□□ -0
PDLIM7-212ENST00000504380 NOL7Q9UMY1 257 aaKnown RBP15.05■□□□□ -0
PDLIM7-212ENST00000504380 SYNRGQ9UMZ2 1314 aa15.04■□□□□ -0
PDLIM7-212ENST00000504380 F13A1P00488 732 aa15.04■□□□□ -0
PDLIM7-212ENST00000504380 DDIT3P35638 169 aa15.04■□□□□ -0
PDLIM7-212ENST00000504380 ARHGAP1Q07960 439 aa15.04■□□□□ -0
PDLIM7-212ENST00000504380 MYSM1Q5VVJ2 828 aa15.04■□□□□ -0
PDLIM7-212ENST00000504380 PPP4R3AQ6IN85 833 aa15.04■□□□□ -0
PDLIM7-212ENST00000504380 CYFIP1Q7L576 1253 aa15.04■□□□□ -0
PDLIM7-212ENST00000504380 TLK2Q86UE8 772 aa15.04■□□□□ -0
PDLIM7-212ENST00000504380 DHX37Q8IY37 1157 aaKnown RBP15.04■□□□□ -0
PDLIM7-212ENST00000504380 CHAMP1Q96JM3 812 aa15.04■□□□□ -0
PDLIM7-212ENST00000504380 IPO9Q96P70 1041 aaKnown RBP15.04■□□□□ -0
PDLIM7-212ENST00000504380 ZNF577Q9BSK1 485 aa15.04■□□□□ -0
PDLIM7-212ENST00000504380 FTOQ9C0B1 505 aaKnown RBP eCLIP15.04■□□□□ -0
PDLIM7-212ENST00000504380 XPNPEP3Q9NQH7 507 aa15.04■□□□□ -0
PDLIM7-212ENST00000504380 FRMPD3Q5JV73 1810 aa15.03■□□□□ -0
PDLIM7-212ENST00000504380 CTAGE5O15320 804 aa15.03■□□□□ -0
PDLIM7-212ENST00000504380 DUSP11O75319 330 aaKnown RBP15.03■□□□□ -0
PDLIM7-212ENST00000504380 BRD1O95696 1058 aa15.03■□□□□ -0
PDLIM7-212ENST00000504380 GH1P01241 217 aa15.03■□□□□ -0
PDLIM7-212ENST00000504380 TFRCP02786 760 aaKnown RBP15.03■□□□□ -0
PDLIM7-212ENST00000504380 GJB1P08034 283 aa15.03■□□□□ -0
PDLIM7-212ENST00000504380 TGFB3P10600 412 aa15.03■□□□□ -0
PDLIM7-212ENST00000504380 GCFC2P16383 781 aaKnown RBP15.03■□□□□ -0
PDLIM7-212ENST00000504380 FXR1P51114 621 aaKnown RBP eCLIP15.03■□□□□ -0
PDLIM7-212ENST00000504380 CELF3Q5SZQ8 465 aaKnown RBP15.03■□□□□ -0
PDLIM7-212ENST00000504380 KCNV1Q6PIU1 500 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms