RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 SLC30A10Q6XR72 485 aa14.91□□□□□ -0.02
LSM6-204ENST00000504181 STAG1Q8WVM7 1258 aa14.91□□□□□ -0.02
LSM6-204ENST00000504181 ARPP21Q9UBL0 812 aaPredicted RBP14.91□□□□□ -0.02
LSM6-204ENST00000504181 TNNQ9UQP3 1299 aa14.91□□□□□ -0.02
LSM6-204ENST00000504181 DOCK5Q9H7D0 1870 aa14.91□□□□□ -0.02
LSM6-204ENST00000504181 TTC3P53804 2025 aa14.9□□□□□ -0.02
LSM6-204ENST00000504181 LOC102724159A0A0B4J2E5 919 aa14.9□□□□□ -0.02
LSM6-204ENST00000504181 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.9□□□□□ -0.02
LSM6-204ENST00000504181 RSPH10B2B2RC85 870 aa14.9□□□□□ -0.02
LSM6-204ENST00000504181 NFIBO00712 420 aa14.9□□□□□ -0.02
LSM6-204ENST00000504181 GLP2RO95838 553 aa14.9□□□□□ -0.02
LSM6-204ENST00000504181 TTLL1O95922 423 aa14.9□□□□□ -0.02
LSM6-204ENST00000504181 RSPH10BP0C881 870 aa14.9□□□□□ -0.02
LSM6-204ENST00000504181 SP100P23497 879 aaPredicted RBP14.9□□□□□ -0.02
LSM6-204ENST00000504181 CALML3P27482 149 aa14.9□□□□□ -0.02
LSM6-204ENST00000504181 PSEN2P49810 448 aa14.9□□□□□ -0.02
LSM6-204ENST00000504181 ATP8B2P98198 1209 aa14.9□□□□□ -0.02
LSM6-204ENST00000504181 PWP2Q15269 919 aaKnown RBP14.9□□□□□ -0.02
LSM6-204ENST00000504181 KCTD1Q719H9 257 aa14.9□□□□□ -0.02
LSM6-204ENST00000504181 CHST3Q7LGC8 479 aa14.9□□□□□ -0.02
LSM6-204ENST00000504181 EFHBQ8N7U6 833 aa14.9□□□□□ -0.02
LSM6-204ENST00000504181 PPP2R3CQ969Q6 453 aa14.9□□□□□ -0.02
LSM6-204ENST00000504181 IL17RAQ96F46 866 aa14.9□□□□□ -0.02
LSM6-204ENST00000504181 MTMR4Q9NYA4 1195 aa14.9□□□□□ -0.02
LSM6-204ENST00000504181 NOP58Q9Y2X3 529 aaKnown RBP14.9□□□□□ -0.02
LSM6-204ENST00000504181 RWDD3Q9Y3V2 267 aa14.9□□□□□ -0.02
LSM6-204ENST00000504181 PCDHGC5Q9Y5F6 944 aa14.9□□□□□ -0.02
LSM6-204ENST00000504181 CHD8Q9HCK8 2581 aa14.9□□□□□ -0.02
LSM6-204ENST00000504181 ATRXP46100 2492 aa14.89□□□□□ -0.03
LSM6-204ENST00000504181 CASTP20810 708 aaKnown RBP14.89□□□□□ -0.03
LSM6-204ENST00000504181 THPOP40225 353 aa14.89□□□□□ -0.03
LSM6-204ENST00000504181 NRIP1P48552 1158 aa14.89□□□□□ -0.03
LSM6-204ENST00000504181 CAMK1Q14012 370 aa14.89□□□□□ -0.03
LSM6-204ENST00000504181 RBM23Q86U06 439 aaKnown RBP14.89□□□□□ -0.03
LSM6-204ENST00000504181 SEPT8Q92599 483 aa14.89□□□□□ -0.03
LSM6-204ENST00000504181 OSBPL7Q9BZF2 842 aa14.89□□□□□ -0.03
LSM6-204ENST00000504181 C1orf115Q9H7X2 142 aa14.89□□□□□ -0.03
LSM6-204ENST00000504181 PRR12Q9ULL5 1215 aa14.89□□□□□ -0.03
LSM6-204ENST00000504181 ADGRA3Q8IWK6 1321 aa14.89□□□□□ -0.03
LSM6-204ENST00000504181 MINDY4BA8MYZ0 360 aa14.88□□□□□ -0.03
LSM6-204ENST00000504181 PRDM1O75626 825 aa14.88□□□□□ -0.03
LSM6-204ENST00000504181 MCCP23508 829 aa14.88□□□□□ -0.03
LSM6-204ENST00000504181 DNAJB1P25685 340 aa14.88□□□□□ -0.03
LSM6-204ENST00000504181 SLC1A4P43007 532 aa14.88□□□□□ -0.03
LSM6-204ENST00000504181 ASTLQ6HA08 431 aaPredicted RBP14.88□□□□□ -0.03
LSM6-204ENST00000504181 RASGRP2Q7LDG7 609 aa14.88□□□□□ -0.03
LSM6-204ENST00000504181 KCNG4Q8TDN1 519 aa14.88□□□□□ -0.03
LSM6-204ENST00000504181 ARHGAP45Q92619 1136 aa14.88□□□□□ -0.03
LSM6-204ENST00000504181 SYNPO2Q9UMS6 1093 aa14.88□□□□□ -0.03
LSM6-204ENST00000504181 GH1P01241 217 aa14.87□□□□□ -0.03
LSM6-204ENST00000504181 ICAM1P05362 532 aa14.87□□□□□ -0.03
LSM6-204ENST00000504181 ZNF286BP0CG31 522 aa14.87□□□□□ -0.03
LSM6-204ENST00000504181 ATF7P17544 494 aaPredicted RBP14.87□□□□□ -0.03
LSM6-204ENST00000504181 ARHGAP1Q07960 439 aa14.87□□□□□ -0.03
LSM6-204ENST00000504181 HIC1Q14526 733 aa14.87□□□□□ -0.03
LSM6-204ENST00000504181 MFSD10Q14728 455 aa14.87□□□□□ -0.03
LSM6-204ENST00000504181 ST3GAL2Q16842 350 aa14.87□□□□□ -0.03
LSM6-204ENST00000504181 LY6KQ17RY6 165 aa14.87□□□□□ -0.03
LSM6-204ENST00000504181 KIAA0753Q2KHM9 967 aa14.87□□□□□ -0.03
LSM6-204ENST00000504181 DHX37Q8IY37 1157 aaKnown RBP14.87□□□□□ -0.03
LSM6-204ENST00000504181 ZNF444Q8N0Y2 327 aaPredicted RBP14.87□□□□□ -0.03
LSM6-204ENST00000504181 KREMEN2Q8NCW0 462 aa14.87□□□□□ -0.03
LSM6-204ENST00000504181 GMCL1Q96IK5 515 aa14.87□□□□□ -0.03
LSM6-204ENST00000504181 MPHOSPH6Q99547 160 aaKnown RBP14.87□□□□□ -0.03
LSM6-204ENST00000504181 BRD1O95696 1058 aa14.86□□□□□ -0.03
LSM6-204ENST00000504181 EDNRBP24530 442 aa14.86□□□□□ -0.03
LSM6-204ENST00000504181 DGKDQ16760 1214 aa14.86□□□□□ -0.03
LSM6-204ENST00000504181 CCDC62Q6P9F0 684 aa14.86□□□□□ -0.03
LSM6-204ENST00000504181 SUSD6Q92537 303 aa14.86□□□□□ -0.03
LSM6-204ENST00000504181 CLP1Q92989 425 aaKnown RBP14.86□□□□□ -0.03
LSM6-204ENST00000504181 CLUAP1Q96AJ1 413 aa14.86□□□□□ -0.03
LSM6-204ENST00000504181 KATNAL1Q9BW62 490 aa14.86□□□□□ -0.03
LSM6-204ENST00000504181 SMOC2Q9H3U7 446 aa14.86□□□□□ -0.03
LSM6-204ENST00000504181 IL1RAPL2Q9NP60 686 aa14.86□□□□□ -0.03
LSM6-204ENST00000504181 PLAGL2Q9UPG8 496 aa14.86□□□□□ -0.03
LSM6-204ENST00000504181 FNDC1Q4ZHG4 1894 aaPredicted RBP14.86□□□□□ -0.03
LSM6-204ENST00000504181 OTOGLQ3ZCN5 2332 aa14.86□□□□□ -0.03
LSM6-204ENST00000504181 PLA2G6O60733 806 aa14.85□□□□□ -0.03
LSM6-204ENST00000504181 CTSHP09668 335 aa14.85□□□□□ -0.03
LSM6-204ENST00000504181 TRIM27P14373 513 aa14.85□□□□□ -0.03
LSM6-204ENST00000504181 RBM10P98175 930 aaKnown RBP14.85□□□□□ -0.03
LSM6-204ENST00000504181 MTMR3Q13615 1198 aa14.85□□□□□ -0.03
LSM6-204ENST00000504181 SBK1Q52WX2 424 aa14.85□□□□□ -0.03
LSM6-204ENST00000504181 RNF207Q6ZRF8 634 aa14.85□□□□□ -0.03
LSM6-204ENST00000504181 PUS7LQ9H0K6 701 aaKnown RBP14.85□□□□□ -0.03
LSM6-204ENST00000504181 MFSD1Q9H3U5 465 aa14.85□□□□□ -0.03
LSM6-204ENST00000504181 PAG1Q9NWQ8 432 aa14.85□□□□□ -0.03
LSM6-204ENST00000504181 MTMR7Q9Y216 660 aa14.85□□□□□ -0.03
LSM6-204ENST00000504181 EXOC6BQ9Y2D4 811 aa14.85□□□□□ -0.03
LSM6-204ENST00000504181 HAS3O00219 553 aa14.84□□□□□ -0.03
LSM6-204ENST00000504181 F2P00734 622 aa14.84□□□□□ -0.03
LSM6-204ENST00000504181 CT47B1P0C2W7 299 aaPredicted RBP14.84□□□□□ -0.03
LSM6-204ENST00000504181 RARSP54136 660 aaKnown RBP14.84□□□□□ -0.03
LSM6-204ENST00000504181 COL9A2Q14055 689 aaPredicted RBP14.84□□□□□ -0.03
LSM6-204ENST00000504181 BTG3Q14201 252 aaPredicted RBP14.84□□□□□ -0.03
LSM6-204ENST00000504181 RCSD1Q6JBY9 416 aa14.84□□□□□ -0.03
LSM6-204ENST00000504181 SEPT14Q6ZU15 432 aa14.84□□□□□ -0.03
LSM6-204ENST00000504181 SERINC5Q86VE9 423 aa14.84□□□□□ -0.03
LSM6-204ENST00000504181 HINFPQ9BQA5 517 aa14.84□□□□□ -0.03
LSM6-204ENST00000504181 PLVAPQ9BX97 442 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms