RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 ANKRD33Q7Z3H0 272 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 FAM126BQ8IXS8 530 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 TMEM199Q8N511 208 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 NUP133Q8WUM0 1156 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 SDR42E1Q8WUS8 393 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 HERVK_113Q902F9 699 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 GLT1D1Q96MS3 346 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 TINF2Q9BSI4 451 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 CCDC8Q9H0W5 538 aaPredicted RBP4.41□□□□□ -1.7
USP46-205ENST00000504078 TRPV6Q9H1D0 765 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 ANTXR1Q9H6X2 564 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 CABP5Q9NP86 173 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 IL23AQ9NPF7 189 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 COPRSQ9NQ92 184 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 HOMER2Q9NSB8 354 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 ISY1Q9ULR0 285 aaKnown RBP4.41□□□□□ -1.7
USP46-205ENST00000504078 NOB1Q9ULX3 412 aaKnown RBP4.41□□□□□ -1.7
USP46-205ENST00000504078 CNPY2Q9Y2B0 182 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 AKAP2Q9Y2D5 859 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 MTCH2Q9Y6C9 303 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 SMCHD1A6NHR9 2005 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 ASTN1O14525 1302 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 A0A1B0GTH6 734 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 ERC2O15083 957 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 TLR3O15455 904 aaKnown RBP4.4□□□□□ -1.71
USP46-205ENST00000504078 B4GALT4O60513 344 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 SNAI1O95863 264 aaPredicted RBP4.4□□□□□ -1.71
USP46-205ENST00000504078 CHGBP05060 677 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 POLR3DP05423 398 aaPredicted RBP4.4□□□□□ -1.71
USP46-205ENST00000504078 UQCRFS1P1P0C7P4 283 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 CYP2C9P11712 490 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 IL9P15248 144 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 ATP2A2P16615 1042 aaKnown RBP4.4□□□□□ -1.71
USP46-205ENST00000504078 FGFR3P22607 806 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 CHMP4BP1P59074 171 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 NHLH1Q02575 133 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 CLN3Q13286 438 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 UBAP2LQ14157 1087 aaKnown RBP4.4□□□□□ -1.71
USP46-205ENST00000504078 KCTD2Q14681 263 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 COG2Q14746 738 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 ZNF792Q3KQV3 632 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 TNNI3KQ59H18 835 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 C1orf53Q5VUE5 145 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 MCTP1Q6DN14 999 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 SNRNP48Q6IEG0 339 aaKnown RBP4.4□□□□□ -1.71
USP46-205ENST00000504078 TATDN1Q6P1N9 297 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 ATF7IPQ6VMQ6 1270 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 CHSY3Q70JA7 882 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 METTL16Q86W50 562 aaKnown RBP4.4□□□□□ -1.71
USP46-205ENST00000504078 FOXP4Q8IVH2 680 aaPredicted RBP4.4□□□□□ -1.71
USP46-205ENST00000504078 CPXCR1Q8N123 301 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 PGBD3Q8N328 593 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 LCORLQ8N3X6 602 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 SHCBP1Q8NEM2 672 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 KLHDC9Q8NEP7 349 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 ZNF592Q92610 1267 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 FGD4Q96M96 766 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 PLVAPQ9BX97 442 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 FAM86C1Q9NVL1 165 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 MCM9Q9NXL9 1143 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 SLC5A4Q9NY91 659 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 DBNLQ9UJU6 430 aaKnown RBP4.4□□□□□ -1.71
USP46-205ENST00000504078 RIPK3Q9Y572 518 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 PCDHB9Q9Y5E1 797 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 SLC4A7Q9Y6M7 1214 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 FPGT-TNNI3KV9GXZ4 949 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 ZNFX1Q9P2E3 1918 aaKnown RBP4.4□□□□□ -1.71
USP46-205ENST00000504078 MROH7Q68CQ1 1323 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 ZNF521Q96K83 1311 aa4.4□□□□□ -1.71
USP46-205ENST00000504078 ARID1BQ8NFD5 2236 aaPredicted RBP4.4□□□□□ -1.71
USP46-205ENST00000504078 LCTP09848 1927 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 ARVCFO00192 962 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 CTAGE5O15320 804 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 PRKAB2O43741 272 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 MAP4K4O95819 1239 aaPredicted RBP4.39□□□□□ -1.71
USP46-205ENST00000504078 FGBP02675 491 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 H2AFB1P0C5Y9 115 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 H2AFB2P0C5Z0 115 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 KCNA5P22460 613 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 CTBSQ01459 385 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 TAP1Q03518 808 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 G3BP1Q13283 466 aaKnown RBP eCLIP4.39□□□□□ -1.71
USP46-205ENST00000504078 GRB10Q13322 594 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 AAK1Q2M2I8 961 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 CCDC144BQ3MJ40 725 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 FAM47CQ5HY64 1035 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 EFHC2Q5JST6 749 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 GNASQ5JWF2 1037 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 CCSAPQ6IQ19 270 aaPredicted RBP4.39□□□□□ -1.71
USP46-205ENST00000504078 FAM117BQ6P1L5 589 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 CCDC174Q6PII3 467 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 EP400NLQ6ZTU2 488 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 ARMCX2Q7L311 632 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 EEPD1Q7L9B9 569 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 RASGRP2Q7LDG7 609 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 TLK2Q86UE8 772 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 RIOX2Q8IUF8 465 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 HOMEZQ8IX15 550 aa4.39□□□□□ -1.71
USP46-205ENST00000504078 FBXO16Q8IX29 292 aaPredicted RBP4.39□□□□□ -1.71
USP46-205ENST00000504078 REPS2Q8NFH8 660 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms