RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 PAK1Q13153 545 aa4.6□□□□□ -1.67
ATXN3-208ENST00000504047 SSPNQ14714 243 aa4.6□□□□□ -1.67
ATXN3-208ENST00000504047 EMC4Q5J8M3 183 aa4.6□□□□□ -1.67
ATXN3-208ENST00000504047 CYP4F22Q6NT55 531 aa4.6□□□□□ -1.67
ATXN3-208ENST00000504047 B3GNT8Q7Z7M8 397 aa4.6□□□□□ -1.67
ATXN3-208ENST00000504047 TRIM48Q8IWZ4 208 aa4.6□□□□□ -1.67
ATXN3-208ENST00000504047 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.6□□□□□ -1.67
ATXN3-208ENST00000504047 KISS1RQ969F8 398 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-208ENST00000504047 KRTAP4-12Q9BQ66 201 aa4.6□□□□□ -1.67
ATXN3-208ENST00000504047 JAM3Q9BX67 310 aa4.6□□□□□ -1.67
ATXN3-208ENST00000504047 KRTAP9-2Q9BYQ4 174 aa4.6□□□□□ -1.67
ATXN3-208ENST00000504047 IRF2BPLQ9H1B7 796 aa4.6□□□□□ -1.67
ATXN3-208ENST00000504047 SMOC1Q9H4F8 434 aa4.6□□□□□ -1.67
ATXN3-208ENST00000504047 BCAS3Q9H6U6 928 aa4.6□□□□□ -1.67
ATXN3-208ENST00000504047 SLC6A20Q9NP91 592 aa4.6□□□□□ -1.67
ATXN3-208ENST00000504047 MYOTQ9UBF9 498 aa4.6□□□□□ -1.67
ATXN3-208ENST00000504047 PTCH2Q9Y6C5 1203 aa4.6□□□□□ -1.67
ATXN3-208ENST00000504047 TADA3O75528 432 aa4.59□□□□□ -1.67
ATXN3-208ENST00000504047 C6orf222P0C671 652 aaPredicted RBP4.59□□□□□ -1.67
ATXN3-208ENST00000504047 CYP2C8P10632 490 aa4.59□□□□□ -1.67
ATXN3-208ENST00000504047 IGFBP6P24592 240 aaPredicted RBP4.59□□□□□ -1.67
ATXN3-208ENST00000504047 AFF3P51826 1226 aaKnown RBP4.59□□□□□ -1.67
ATXN3-208ENST00000504047 JAG1P78504 1218 aa4.59□□□□□ -1.67
ATXN3-208ENST00000504047 ST5P78524 1137 aa4.59□□□□□ -1.67
ATXN3-208ENST00000504047 FAM47CQ5HY64 1035 aa4.59□□□□□ -1.67
ATXN3-208ENST00000504047 ASXL2Q76L83 1435 aa4.59□□□□□ -1.67
ATXN3-208ENST00000504047 OTOP3Q7RTS5 596 aa4.59□□□□□ -1.67
ATXN3-208ENST00000504047 FAM129CQ86XR2 697 aa4.59□□□□□ -1.67
ATXN3-208ENST00000504047 MIB1Q86YT6 1006 aa4.59□□□□□ -1.67
ATXN3-208ENST00000504047 FAM126BQ8IXS8 530 aa4.59□□□□□ -1.67
ATXN3-208ENST00000504047 TMEFF1Q8IYR6 380 aa4.59□□□□□ -1.67
ATXN3-208ENST00000504047 LILRB2Q8N423 598 aa4.59□□□□□ -1.67
ATXN3-208ENST00000504047 PANK1Q8TE04 598 aa4.59□□□□□ -1.67
ATXN3-208ENST00000504047 PWWP2AQ96N64 755 aa4.59□□□□□ -1.67
ATXN3-208ENST00000504047 KCNJ15Q99712 375 aa4.59□□□□□ -1.67
ATXN3-208ENST00000504047 MRPL4Q9BYD3 311 aaKnown RBP4.59□□□□□ -1.67
ATXN3-208ENST00000504047 PPARGC1AQ9UBK2 798 aaKnown RBP4.59□□□□□ -1.67
ATXN3-208ENST00000504047 NDOR1Q9UHB4 597 aa4.59□□□□□ -1.67
ATXN3-208ENST00000504047 SFMBT1Q9UHJ3 866 aa4.59□□□□□ -1.67
ATXN3-208ENST00000504047 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-208ENST00000504047 ZSCAN22P10073 491 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-208ENST00000504047 ATF2P15336 505 aa4.58□□□□□ -1.68
ATXN3-208ENST00000504047 MC3RP41968 323 aa4.58□□□□□ -1.68
ATXN3-208ENST00000504047 LIMS1P48059 325 aa4.58□□□□□ -1.68
ATXN3-208ENST00000504047 NKX3-2P78367 333 aa4.58□□□□□ -1.68
ATXN3-208ENST00000504047 CAP1Q01518 475 aa4.58□□□□□ -1.68
ATXN3-208ENST00000504047 FZD5Q13467 585 aa4.58□□□□□ -1.68
ATXN3-208ENST00000504047 CD300LDQ6UXZ3 194 aa4.58□□□□□ -1.68
ATXN3-208ENST00000504047 EP400NLQ6ZTU2 488 aa4.58□□□□□ -1.68
ATXN3-208ENST00000504047 KRTAP19-1Q8IUB9 90 aa4.58□□□□□ -1.68
ATXN3-208ENST00000504047 SIAH1Q8IUQ4 282 aa4.58□□□□□ -1.68
ATXN3-208ENST00000504047 ZC3H7AQ8IWR0 971 aaKnown RBP4.58□□□□□ -1.68
ATXN3-208ENST00000504047 SMARCC2Q8TAQ2 1214 aa4.58□□□□□ -1.68
ATXN3-208ENST00000504047 PIP4K2CQ8TBX8 421 aa4.58□□□□□ -1.68
ATXN3-208ENST00000504047 FBXW5Q969U6 566 aa4.58□□□□□ -1.68
ATXN3-208ENST00000504047 TOE1Q96GM8 510 aaKnown RBP4.58□□□□□ -1.68
ATXN3-208ENST00000504047 MAGEB10Q96LZ2 347 aaPredicted RBP4.58□□□□□ -1.68
ATXN3-208ENST00000504047 CDIP1Q9H305 208 aa4.58□□□□□ -1.68
ATXN3-208ENST00000504047 IPPKQ9H8X2 491 aa4.58□□□□□ -1.68
ATXN3-208ENST00000504047 DTLQ9NZJ0 730 aa4.58□□□□□ -1.68
ATXN3-208ENST00000504047 PLA2G2DQ9UNK4 145 aa4.58□□□□□ -1.68
ATXN3-208ENST00000504047 PCDHA8Q9Y5H6 950 aa4.58□□□□□ -1.68
ATXN3-208ENST00000504047 PMF1-BGLAPU3KQ54 211 aa4.58□□□□□ -1.68
ATXN3-208ENST00000504047 KRTAP9-6A0A140TA67 174 aa4.57□□□□□ -1.68
ATXN3-208ENST00000504047 TCRBV5S2A0A599 114 aa4.57□□□□□ -1.68
ATXN3-208ENST00000504047 PLD2O14939 933 aa4.57□□□□□ -1.68
ATXN3-208ENST00000504047 SMARCA5O60264 1052 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-208ENST00000504047 CRTAMO95727 393 aa4.57□□□□□ -1.68
ATXN3-208ENST00000504047 CRY1Q16526 586 aa4.57□□□□□ -1.68
ATXN3-208ENST00000504047 TRIM61Q5EBN2 209 aa4.57□□□□□ -1.68
ATXN3-208ENST00000504047 CILP2Q8IUL8 1156 aa4.57□□□□□ -1.68
ATXN3-208ENST00000504047 NLGN4XQ8N0W4 816 aa4.57□□□□□ -1.68
ATXN3-208ENST00000504047 UHMK1Q8TAS1 419 aaKnown RBP4.57□□□□□ -1.68
ATXN3-208ENST00000504047 SH3TC2Q8TF17 1288 aa4.57□□□□□ -1.68
ATXN3-208ENST00000504047 DACT3Q96B18 629 aaPredicted RBP4.57□□□□□ -1.68
ATXN3-208ENST00000504047 SLC52A2Q9HAB3 445 aa4.57□□□□□ -1.68
ATXN3-208ENST00000504047 NCOA5Q9HCD5 579 aaKnown RBP4.57□□□□□ -1.68
ATXN3-208ENST00000504047 CATSPERZQ9NTU4 200 aa4.57□□□□□ -1.68
ATXN3-208ENST00000504047 ASH2LQ9UBL3 628 aa4.57□□□□□ -1.68
ATXN3-208ENST00000504047 DSEQ9UL01 958 aa4.57□□□□□ -1.68
ATXN3-208ENST00000504047 PCDHA9Q9Y5H5 950 aa4.57□□□□□ -1.68
ATXN3-208ENST00000504047 ARVCFO00192 962 aa4.56□□□□□ -1.68
ATXN3-208ENST00000504047 WNT9AO14904 365 aa4.56□□□□□ -1.68
ATXN3-208ENST00000504047 SLC27A2O14975 620 aa4.56□□□□□ -1.68
ATXN3-208ENST00000504047 COL6A2P12110 1019 aa4.56□□□□□ -1.68
ATXN3-208ENST00000504047 GPR19Q15760 415 aa4.56□□□□□ -1.68
ATXN3-208ENST00000504047 TTLL7Q6ZT98 887 aa4.56□□□□□ -1.68
ATXN3-208ENST00000504047 C1QL4Q86Z23 238 aa4.56□□□□□ -1.68
ATXN3-208ENST00000504047 SYNPOQ8N3V7 929 aa4.56□□□□□ -1.68
ATXN3-208ENST00000504047 ARRDC4Q8NCT1 418 aa4.56□□□□□ -1.68
ATXN3-208ENST00000504047 PIF1Q9H611 641 aa4.56□□□□□ -1.68
ATXN3-208ENST00000504047 EPB41L4AQ9HCS5 686 aaPredicted RBP4.56□□□□□ -1.68
ATXN3-208ENST00000504047 TMEM260Q9NX78 707 aa4.56□□□□□ -1.68
ATXN3-208ENST00000504047 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-208ENST00000504047 NKRFO15226 690 aaKnown RBP eCLIP4.55□□□□□ -1.68
ATXN3-208ENST00000504047 KCNQ2O43526 872 aa4.55□□□□□ -1.68
ATXN3-208ENST00000504047 C8BP07358 591 aa4.55□□□□□ -1.68
ATXN3-208ENST00000504047 SRGAP2CP0DJJ0 459 aa4.55□□□□□ -1.68
ATXN3-208ENST00000504047 PYGMP11217 842 aa4.55□□□□□ -1.68
ATXN3-208ENST00000504047 STAT5AP42229 794 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms