RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 UBTFL1P0CB47 393 aaPredicted RBP6.53□□□□□ -1.36
LINC01340-201ENST00000504012 MYBP10242 640 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 CCNB1P14635 433 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 NAT1P18440 290 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 BDNFP23560 247 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 FXR1P51114 621 aaKnown RBP eCLIP6.53□□□□□ -1.36
LINC01340-201ENST00000504012 NEK2P51955 445 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 HDAC4P56524 1084 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 PPP4CP60510 307 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 POU5F1Q01860 360 aaKnown RBP6.53□□□□□ -1.36
LINC01340-201ENST00000504012 PLS1Q14651 629 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 KRT72Q14CN4 511 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 DIXDC1Q155Q3 683 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 GJC2Q5T442 439 aaPredicted RBP6.53□□□□□ -1.36
LINC01340-201ENST00000504012 MFSD4BQ5TF39 518 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 C8orf74Q6P047 294 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 PI16Q6UXB8 463 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 DPH6Q7L8W6 267 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 EXOC3L1Q86VI1 746 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 PASD1Q8IV76 773 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 CLASRPQ8N2M8 674 aaKnown RBP6.53□□□□□ -1.36
LINC01340-201ENST00000504012 LARGE2Q8N3Y3 721 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 DNAJC9Q8WXX5 260 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 IFT81Q8WYA0 676 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 GATA6Q92908 595 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 KLHL29Q96CT2 875 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 DDX27Q96GQ7 796 aaKnown RBP6.53□□□□□ -1.36
LINC01340-201ENST00000504012 HIC2Q96JB3 615 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 CGREF1Q99674 301 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 FAM167BQ9BTA0 163 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 SPATA16Q9BXB7 569 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 EIF2AQ9BY44 585 aaKnown RBP6.53□□□□□ -1.36
LINC01340-201ENST00000504012 PUS3Q9BZE2 481 aaKnown RBP6.53□□□□□ -1.36
LINC01340-201ENST00000504012 HELLSQ9NRZ9 838 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 BABAM1Q9NWV8 329 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 QPCTLQ9NXS2 382 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 DDX43Q9NXZ2 648 aaKnown RBP6.53□□□□□ -1.36
LINC01340-201ENST00000504012 CYP39A1Q9NYL5 469 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 PLAAQ9Y263 795 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 CLIC4Q9Y696 253 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 AGLP35573 1532 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 CARMIL3Q8ND23 1372 aa6.53□□□□□ -1.36
LINC01340-201ENST00000504012 CLTCQ00610 1675 aaKnown RBP6.52□□□□□ -1.37
LINC01340-201ENST00000504012 CASZ1Q86V15 1759 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 ABCC1P33527 1531 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 A0A0U1RQJ8 604 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 IGF2BP3O00425 579 aaKnown RBP eCLIP6.52□□□□□ -1.37
LINC01340-201ENST00000504012 TEX33O43247 280 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 HNRNPCL1O60812 293 aaKnown RBP6.52□□□□□ -1.37
LINC01340-201ENST00000504012 ZBED4O75132 1171 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 RAPGEF3O95398 923 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 TFRCP02786 760 aaKnown RBP6.52□□□□□ -1.37
LINC01340-201ENST00000504012 ASLP04424 464 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 TPBGLP0DKB5 382 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 PIM1P11309 404 aaPredicted RBP6.52□□□□□ -1.37
LINC01340-201ENST00000504012 IDEP14735 1019 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 VAMP1P23763 118 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 TMOD1P28289 359 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 PDE6BP35913 854 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 PDE6CP51160 858 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 RHBDL3P58872 404 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 BPIFB4P59827 614 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 HERVK_113P62684 666 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 GPSM2P81274 684 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 PDE1BQ01064 536 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 FMR1Q06787 632 aaKnown RBP eCLIP6.52□□□□□ -1.37
LINC01340-201ENST00000504012 ADCY1Q08828 1119 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 C2orf54Q08AI8 447 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 NEXNQ0ZGT2 675 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 STK3Q13188 491 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 NMIQ13287 307 aaPredicted RBP6.52□□□□□ -1.37
LINC01340-201ENST00000504012 PNOCQ13519 176 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 PTPAQ15257 358 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 INAQ16352 499 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 BCL2A1Q16548 175 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 PTPROQ16827 1216 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 CFAP221Q4G0U5 840 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 SLC44A4Q53GD3 710 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 NAALADL2Q58DX5 795 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 SHC4Q6S5L8 630 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 HDGFL2Q7Z4V5 671 aaPredicted RBP6.52□□□□□ -1.37
LINC01340-201ENST00000504012 PCGF5Q86SE9 256 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 RAB11FIP4Q86YS3 637 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 LRRC49Q8IUZ0 686 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 GSPT2Q8IYD1 628 aaKnown RBP6.52□□□□□ -1.37
LINC01340-201ENST00000504012 STAG2Q8N3U4 1231 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 TRPC4APQ8TEL6 797 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 PIGOQ8TEQ8 1089 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 DIS3LQ8TF46 1054 aaKnown RBP6.52□□□□□ -1.37
LINC01340-201ENST00000504012 NOC3LQ8WTT2 800 aaKnown RBP6.52□□□□□ -1.37
LINC01340-201ENST00000504012 ATXN2LQ8WWM7 1075 aaKnown RBP6.52□□□□□ -1.37
LINC01340-201ENST00000504012 INPP5DQ92835 1189 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 ZNF333Q96JL9 665 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 SNX27Q96L92 541 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 TUBGCP5Q96RT8 1024 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 RPS6KC1Q96S38 1066 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 MTRQ99707 1265 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 CENPKQ9BS16 269 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 NACA2Q9H009 215 aa6.52□□□□□ -1.37
LINC01340-201ENST00000504012 USP44Q9H0E7 712 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms