RNA–Protein interactions for RNA: ENST00000503420.5

CCHCR1-217, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-217ENST00000503420 NOD1Q9Y239 953 aa25.29■■□□□ 1.64
CCHCR1-217ENST00000503420 KIAA1217Q5T5P2 1943 aa25.28■■□□□ 1.64
CCHCR1-217ENST00000503420 SOX1O00570 391 aaPredicted RBP25.28■■□□□ 1.64
CCHCR1-217ENST00000503420 FIBPO43427 364 aa25.28■■□□□ 1.64
CCHCR1-217ENST00000503420 SORBS3O60504 671 aa25.28■■□□□ 1.64
CCHCR1-217ENST00000503420 PPFIA4O75335 1185 aa25.28■■□□□ 1.64
CCHCR1-217ENST00000503420 UBA1P22314 1058 aaKnown RBP25.28■■□□□ 1.64
CCHCR1-217ENST00000503420 ICAM3P32942 547 aa25.28■■□□□ 1.64
CCHCR1-217ENST00000503420 ADCY7P51828 1080 aa25.28■■□□□ 1.64
CCHCR1-217ENST00000503420 LRCH3Q96II8 777 aa25.28■■□□□ 1.64
CCHCR1-217ENST00000503420 INPP4AQ96PE3 977 aaPredicted RBP25.28■■□□□ 1.64
CCHCR1-217ENST00000503420 KATNAL1Q9BW62 490 aa25.28■■□□□ 1.64
CCHCR1-217ENST00000503420 RIC8AQ9NPQ8 531 aa25.28■■□□□ 1.64
CCHCR1-217ENST00000503420 PCDHA6Q9UN73 950 aa25.28■■□□□ 1.64
CCHCR1-217ENST00000503420 PCDHA8Q9Y5H6 950 aa25.28■■□□□ 1.64
CCHCR1-217ENST00000503420 SMCO2A6NFE2 343 aa25.27■■□□□ 1.64
CCHCR1-217ENST00000503420 SPATA31C2B4DYI2 1134 aa25.27■■□□□ 1.64
CCHCR1-217ENST00000503420 NOP56O00567 594 aaKnown RBP25.27■■□□□ 1.64
CCHCR1-217ENST00000503420 CYP2C18P33260 490 aa25.27■■□□□ 1.64
CCHCR1-217ENST00000503420 C9orf50Q5SZB4 431 aa25.27■■□□□ 1.64
CCHCR1-217ENST00000503420 CDHR1Q96JP9 859 aa25.27■■□□□ 1.64
CCHCR1-217ENST00000503420 TRMT13Q9NUP7 481 aaKnown RBP25.27■■□□□ 1.64
CCHCR1-217ENST00000503420 BARHL2Q9NY43 387 aa25.27■■□□□ 1.64
CCHCR1-217ENST00000503420 FOSP01100 380 aaPredicted RBP25.26■■□□□ 1.63
CCHCR1-217ENST00000503420 SP2Q02086 613 aa25.26■■□□□ 1.63
CCHCR1-217ENST00000503420 GIMAP8Q8ND71 665 aaPredicted RBP25.26■■□□□ 1.63
CCHCR1-217ENST00000503420 CCDC12Q8WUD4 166 aaPredicted RBP25.26■■□□□ 1.63
CCHCR1-217ENST00000503420 RNPC3Q96LT9 517 aaKnown RBP25.26■■□□□ 1.63
CCHCR1-217ENST00000503420 PDRG1Q9NUG6 133 aa25.26■■□□□ 1.63
CCHCR1-217ENST00000503420 STXBP3O00186 592 aa25.25■■□□□ 1.63
CCHCR1-217ENST00000503420 PDIA3P30101 505 aaKnown RBP25.25■■□□□ 1.63
CCHCR1-217ENST00000503420 PFKFB3Q16875 520 aaPredicted RBP25.25■■□□□ 1.63
CCHCR1-217ENST00000503420 GPR153Q6NV75 609 aa25.25■■□□□ 1.63
CCHCR1-217ENST00000503420 C7orf31Q8N865 590 aa25.25■■□□□ 1.63
CCHCR1-217ENST00000503420 NOC4LQ9BVI4 516 aaKnown RBP25.25■■□□□ 1.63
CCHCR1-217ENST00000503420 UPF3BQ9BZI7 483 aaKnown RBP25.25■■□□□ 1.63
CCHCR1-217ENST00000503420 LTBP2Q14767 1821 aa25.25■■□□□ 1.63
CCHCR1-217ENST00000503420 PRPF3O43395 683 aaKnown RBP25.24■■□□□ 1.63
CCHCR1-217ENST00000503420 CYP2C9P11712 490 aa25.24■■□□□ 1.63
CCHCR1-217ENST00000503420 SCG2P13521 617 aa25.24■■□□□ 1.63
CCHCR1-217ENST00000503420 CSF2RAP15509 400 aa25.24■■□□□ 1.63
CCHCR1-217ENST00000503420 PSEN2P49810 448 aa25.24■■□□□ 1.63
CCHCR1-217ENST00000503420 EPHB4P54760 987 aa25.24■■□□□ 1.63
CCHCR1-217ENST00000503420 CCT2P78371 535 aaKnown RBP25.24■■□□□ 1.63
CCHCR1-217ENST00000503420 HSDL1Q3SXM5 330 aa25.24■■□□□ 1.63
CCHCR1-217ENST00000503420 CYFIP1Q7L576 1253 aa25.24■■□□□ 1.63
CCHCR1-217ENST00000503420 RETREG2Q8NC44 543 aa25.24■■□□□ 1.63
CCHCR1-217ENST00000503420 GPRASP2Q96D09 838 aa25.24■■□□□ 1.63
CCHCR1-217ENST00000503420 SENP7Q9BQF6 1050 aa25.24■■□□□ 1.63
CCHCR1-217ENST00000503420 ALG1Q9BT22 464 aa25.24■■□□□ 1.63
CCHCR1-217ENST00000503420 ZNF286BP0CG31 522 aa25.23■■□□□ 1.63
CCHCR1-217ENST00000503420 CCL23P55773 120 aa25.23■■□□□ 1.63
CCHCR1-217ENST00000503420 EVCP57679 992 aa25.23■■□□□ 1.63
CCHCR1-217ENST00000503420 MFSD10Q14728 455 aa25.23■■□□□ 1.63
CCHCR1-217ENST00000503420 PTGISQ16647 500 aa25.23■■□□□ 1.63
CCHCR1-217ENST00000503420 METTL7BQ6UX53 244 aa25.23■■□□□ 1.63
CCHCR1-217ENST00000503420 RPUSD2Q8IZ73 545 aaKnown RBP25.23■■□□□ 1.63
CCHCR1-217ENST00000503420 PPP1R13LQ8WUF5 828 aa25.23■■□□□ 1.63
CCHCR1-217ENST00000503420 KAT2BQ92831 832 aa25.23■■□□□ 1.63
CCHCR1-217ENST00000503420 NID2Q14112 1375 aa25.22■■□□□ 1.63
CCHCR1-217ENST00000503420 CPLX1O14810 134 aa25.22■■□□□ 1.63
CCHCR1-217ENST00000503420 BFSP2Q13515 415 aa25.22■■□□□ 1.63
CCHCR1-217ENST00000503420 TOB2Q14106 344 aaPredicted RBP25.22■■□□□ 1.63
CCHCR1-217ENST00000503420 KIAA0753Q2KHM9 967 aa25.22■■□□□ 1.63
CCHCR1-217ENST00000503420 TYW1BQ6NUM6 668 aa25.22■■□□□ 1.63
CCHCR1-217ENST00000503420 PSRC1Q6PGN9 363 aaPredicted RBP25.22■■□□□ 1.63
CCHCR1-217ENST00000503420 CPLX2Q6PUV4 134 aaKnown RBP25.22■■□□□ 1.63
CCHCR1-217ENST00000503420 SESTD1Q86VW0 696 aa25.22■■□□□ 1.63
CCHCR1-217ENST00000503420 ZNF274Q96GC6 653 aaPredicted RBP25.22■■□□□ 1.63
CCHCR1-217ENST00000503420 SLC26A6Q9BXS9 759 aa25.22■■□□□ 1.63
CCHCR1-217ENST00000503420 C6orf50Q9HD87 102 aa25.22■■□□□ 1.63
CCHCR1-217ENST00000503420 MAFGO15525 162 aa25.21■■□□□ 1.63
CCHCR1-217ENST00000503420 F2P00734 622 aa25.21■■□□□ 1.63
CCHCR1-217ENST00000503420 ANAPC15P60006 121 aa25.21■■□□□ 1.63
CCHCR1-217ENST00000503420 AP3B2Q13367 1082 aa25.21■■□□□ 1.63
CCHCR1-217ENST00000503420 MTMR1Q13613 665 aa25.21■■□□□ 1.63
CCHCR1-217ENST00000503420 TRIM22Q8IYM9 498 aa25.21■■□□□ 1.63
CCHCR1-217ENST00000503420 CCDC155Q8N6L0 562 aa25.21■■□□□ 1.63
CCHCR1-217ENST00000503420 PHKBQ93100 1093 aa25.21■■□□□ 1.63
CCHCR1-217ENST00000503420 RNF26Q9BY78 433 aaPredicted RBP25.21■■□□□ 1.63
CCHCR1-217ENST00000503420 IL23AQ9NPF7 189 aa25.21■■□□□ 1.63
CCHCR1-217ENST00000503420 SCN10AQ9Y5Y9 1956 aa25.21■■□□□ 1.63
CCHCR1-217ENST00000503420 ACRP10323 421 aa25.2■■□□□ 1.62
CCHCR1-217ENST00000503420 HOXD8P13378 290 aaPredicted RBP25.2■■□□□ 1.62
CCHCR1-217ENST00000503420 IFNAR1P17181 557 aa25.2■■□□□ 1.62
CCHCR1-217ENST00000503420 GNA11P29992 359 aa25.2■■□□□ 1.62
CCHCR1-217ENST00000503420 ZNF76P36508 570 aa25.2■■□□□ 1.62
CCHCR1-217ENST00000503420 SEMA3FQ13275 785 aa25.2■■□□□ 1.62
CCHCR1-217ENST00000503420 MCTP2Q6DN12 878 aa25.2■■□□□ 1.62
CCHCR1-217ENST00000503420 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.2■■□□□ 1.626e-7■■■□□ 16.7
CCHCR1-217ENST00000503420 MTIF3Q9H2K0 278 aaKnown RBP25.2■■□□□ 1.62
CCHCR1-217ENST00000503420 NCOA5Q9HCD5 579 aaKnown RBP25.2■■□□□ 1.62
CCHCR1-217ENST00000503420 UBIAD1Q9Y5Z9 338 aa25.2■■□□□ 1.62
CCHCR1-217ENST00000503420 MYH7BA7E2Y1 1941 aa25.2■■□□□ 1.62
CCHCR1-217ENST00000503420 UMODL1Q5DID0 1318 aa25.19■■□□□ 1.62
CCHCR1-217ENST00000503420 ITGB5P18084 799 aa25.19■■□□□ 1.62
CCHCR1-217ENST00000503420 SP4Q02446 784 aa25.19■■□□□ 1.62
CCHCR1-217ENST00000503420 SSRP1Q08945 709 aaKnown RBP25.19■■□□□ 1.62
CCHCR1-217ENST00000503420 ANO3Q9BYT9 981 aa25.19■■□□□ 1.62
CCHCR1-217ENST00000503420 JADE2Q9NQC1 790 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms