RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 NLGN1Q8N2Q7 840 aa8.46□□□□□ -1.06
NIPBL-203ENST00000503274 ALG3Q92685 438 aa8.46□□□□□ -1.06
NIPBL-203ENST00000503274 SCLYQ96I15 445 aa8.46□□□□□ -1.06
NIPBL-203ENST00000503274 PPP1R16BQ96T49 567 aa8.46□□□□□ -1.06
NIPBL-203ENST00000503274 GCM1Q9NP62 436 aa8.46□□□□□ -1.06
NIPBL-203ENST00000503274 PALD1Q9ULE6 856 aa8.46□□□□□ -1.06
NIPBL-203ENST00000503274 ETV2O00321 342 aaPredicted RBP8.45□□□□□ -1.06
NIPBL-203ENST00000503274 KRIT1O00522 736 aa8.45□□□□□ -1.06
NIPBL-203ENST00000503274 WNT9AO14904 365 aa8.45□□□□□ -1.06
NIPBL-203ENST00000503274 TADA3O75528 432 aa8.45□□□□□ -1.06
NIPBL-203ENST00000503274 RFPL3O75679 317 aa8.45□□□□□ -1.06
NIPBL-203ENST00000503274 GNAT1P11488 350 aa8.45□□□□□ -1.06
NIPBL-203ENST00000503274 GLDCP23378 1020 aa8.45□□□□□ -1.06
NIPBL-203ENST00000503274 DLG4P78352 724 aa8.45□□□□□ -1.06
NIPBL-203ENST00000503274 EMC4Q5J8M3 183 aa8.45□□□□□ -1.06
NIPBL-203ENST00000503274 OTOP3Q7RTS5 596 aa8.45□□□□□ -1.06
NIPBL-203ENST00000503274 FGD2Q7Z6J4 655 aa8.45□□□□□ -1.06
NIPBL-203ENST00000503274 MILR1Q7Z6M3 343 aa8.45□□□□□ -1.06
NIPBL-203ENST00000503274 ZC3H7AQ8IWR0 971 aaKnown RBP8.45□□□□□ -1.06
NIPBL-203ENST00000503274 BHLHE22Q8NFJ8 381 aaPredicted RBP8.45□□□□□ -1.06
NIPBL-203ENST00000503274 PIP4K2CQ8TBX8 421 aa8.45□□□□□ -1.06
NIPBL-203ENST00000503274 BCAS3Q9H6U6 928 aa8.45□□□□□ -1.06
NIPBL-203ENST00000503274 SLC6A20Q9NP91 592 aa8.45□□□□□ -1.06
NIPBL-203ENST00000503274 ZNF652Q9Y2D9 606 aa8.45□□□□□ -1.06
NIPBL-203ENST00000503274 MAFKO60675 156 aa8.44□□□□□ -1.06
NIPBL-203ENST00000503274 SRGAP2CP0DJJ0 459 aa8.44□□□□□ -1.06
NIPBL-203ENST00000503274 COL6A2P12110 1019 aa8.44□□□□□ -1.06
NIPBL-203ENST00000503274 CDR1P51861 262 aa8.44□□□□□ -1.06
NIPBL-203ENST00000503274 TKFCQ3LXA3 575 aa8.44□□□□□ -1.06
NIPBL-203ENST00000503274 MZB1Q8WU39 189 aa8.44□□□□□ -1.06
NIPBL-203ENST00000503274 FBXW5Q969U6 566 aa8.44□□□□□ -1.06
NIPBL-203ENST00000503274 SMOC1Q9H4F8 434 aa8.44□□□□□ -1.06
NIPBL-203ENST00000503274 PCDHA5Q9Y5H7 936 aa8.44□□□□□ -1.06
NIPBL-203ENST00000503274 CD2APQ9Y5K6 639 aa8.44□□□□□ -1.06
NIPBL-203ENST00000503274 IRS2Q9Y4H2 1338 aa8.44□□□□□ -1.06
NIPBL-203ENST00000503274 TCRBV16S1A1N1A0A5B0 115 aa8.43□□□□□ -1.06
NIPBL-203ENST00000503274 NFIBO00712 420 aa8.43□□□□□ -1.06
NIPBL-203ENST00000503274 N4BP3O15049 544 aa8.43□□□□□ -1.06
NIPBL-203ENST00000503274 GSTA4O15217 222 aa8.43□□□□□ -1.06
NIPBL-203ENST00000503274 MED14OSP0DP75 135 aa8.43□□□□□ -1.06
NIPBL-203ENST00000503274 PABPC4Q13310 644 aaKnown RBP eCLIP8.43□□□□□ -1.06
NIPBL-203ENST00000503274 TARBP2Q15633 366 aaKnown RBP8.43□□□□□ -1.06
NIPBL-203ENST00000503274 SDE2Q6IQ49 451 aa8.43□□□□□ -1.06
NIPBL-203ENST00000503274 C16orf59Q7L2K0 433 aa8.43□□□□□ -1.06
NIPBL-203ENST00000503274 PLA2G2DQ9UNK4 145 aa8.43□□□□□ -1.06
NIPBL-203ENST00000503274 ARID1BQ8NFD5 2236 aaPredicted RBP8.42□□□□□ -1.06
NIPBL-203ENST00000503274 KRT1P04264 644 aa8.42□□□□□ -1.06
NIPBL-203ENST00000503274 ASGR2P07307 311 aa8.42□□□□□ -1.06
NIPBL-203ENST00000503274 NCAM1P13591 858 aa8.42□□□□□ -1.06
NIPBL-203ENST00000503274 FBLN1P23142 703 aa8.42□□□□□ -1.06
NIPBL-203ENST00000503274 PMLP29590 882 aa8.42□□□□□ -1.06
NIPBL-203ENST00000503274 EPHB3P54753 998 aa8.42□□□□□ -1.06
NIPBL-203ENST00000503274 NCKAP1LP55160 1127 aa8.42□□□□□ -1.06
NIPBL-203ENST00000503274 ST5P78524 1137 aa8.42□□□□□ -1.06
NIPBL-203ENST00000503274 FAM47CQ5HY64 1035 aa8.42□□□□□ -1.06
NIPBL-203ENST00000503274 HABP4Q5JVS0 413 aaKnown RBP8.42□□□□□ -1.06
NIPBL-203ENST00000503274 CYP4F22Q6NT55 531 aa8.42□□□□□ -1.06
NIPBL-203ENST00000503274 ATG14Q6ZNE5 492 aa8.42□□□□□ -1.06
NIPBL-203ENST00000503274 KIAA0907Q7Z7F0 614 aaPredicted RBP8.42□□□□□ -1.06
NIPBL-203ENST00000503274 PHOSPHO1Q8TCT1 267 aa8.42□□□□□ -1.06
NIPBL-203ENST00000503274 FEZ1Q99689 392 aa8.42□□□□□ -1.06
NIPBL-203ENST00000503274 CATSPERZQ9NTU4 200 aa8.42□□□□□ -1.06
NIPBL-203ENST00000503274 MYOTQ9UBF9 498 aa8.42□□□□□ -1.06
NIPBL-203ENST00000503274 PCDHB4Q9Y5E5 795 aa8.42□□□□□ -1.06
NIPBL-203ENST00000503274 BICRAQ9NZM4 1560 aa8.42□□□□□ -1.06
NIPBL-203ENST00000503274 NKRFO15226 690 aaKnown RBP eCLIP8.41□□□□□ -1.06
NIPBL-203ENST00000503274 TSPAN15O95858 294 aa8.41□□□□□ -1.06
NIPBL-203ENST00000503274 C8AP07357 584 aa8.41□□□□□ -1.06
NIPBL-203ENST00000503274 C1QTNF9P0C862 333 aa8.41□□□□□ -1.06
NIPBL-203ENST00000503274 PYGMP11217 842 aa8.41□□□□□ -1.06
NIPBL-203ENST00000503274 PFKLP17858 780 aa8.41□□□□□ -1.06
NIPBL-203ENST00000503274 PKN1Q16512 942 aa8.41□□□□□ -1.06
NIPBL-203ENST00000503274 C21orf62-AS1Q17RA5 79 aa8.41□□□□□ -1.06
NIPBL-203ENST00000503274 PLEKHG4Q58EX7 1191 aa8.41□□□□□ -1.06
NIPBL-203ENST00000503274 LCE1DQ5T752 114 aa8.41□□□□□ -1.06
NIPBL-203ENST00000503274 AMIGO3Q86WK7 504 aa8.41□□□□□ -1.06
NIPBL-203ENST00000503274 IGDCC3Q8IVU1 814 aa8.41□□□□□ -1.06
NIPBL-203ENST00000503274 RNF38Q9H0F5 515 aa8.41□□□□□ -1.06
NIPBL-203ENST00000503274 NUB1Q9Y5A7 615 aa8.41□□□□□ -1.06
NIPBL-203ENST00000503274 TCRBV5S2A0A599 114 aa8.4□□□□□ -1.06
NIPBL-203ENST00000503274 CCDC66A2RUB6 948 aa8.4□□□□□ -1.06
NIPBL-203ENST00000503274 TCAF2A6NFQ2 919 aa8.4□□□□□ -1.06
NIPBL-203ENST00000503274 BUB1BO60566 1050 aaPredicted RBP8.4□□□□□ -1.06
NIPBL-203ENST00000503274 DNAJC8O75937 253 aaPredicted RBP8.4□□□□□ -1.06
NIPBL-203ENST00000503274 CKMP06732 381 aa8.4□□□□□ -1.06
NIPBL-203ENST00000503274 SDSP20132 328 aa8.4□□□□□ -1.06
NIPBL-203ENST00000503274 HSD3B2P26439 372 aa8.4□□□□□ -1.06
NIPBL-203ENST00000503274 DNM2P50570 870 aa8.4□□□□□ -1.06
NIPBL-203ENST00000503274 TRIM48Q8IWZ4 208 aa8.4□□□□□ -1.06
NIPBL-203ENST00000503274 UHMK1Q8TAS1 419 aaKnown RBP8.4□□□□□ -1.06
NIPBL-203ENST00000503274 PANK1Q8TE04 598 aa8.4□□□□□ -1.06
NIPBL-203ENST00000503274 CPA5Q8WXQ8 436 aa8.4□□□□□ -1.06
NIPBL-203ENST00000503274 NINJ1Q92982 152 aa8.4□□□□□ -1.06
NIPBL-203ENST00000503274 DSEQ9UL01 958 aa8.4□□□□□ -1.06
NIPBL-203ENST00000503274 SHROOM4Q9ULL8 1493 aa8.39□□□□□ -1.07
NIPBL-203ENST00000503274 SLC27A2O14975 620 aa8.39□□□□□ -1.07
NIPBL-203ENST00000503274 OPA1O60313 960 aa8.39□□□□□ -1.07
NIPBL-203ENST00000503274 ASLP04424 464 aa8.39□□□□□ -1.07
NIPBL-203ENST00000503274 KCNA6P17658 529 aa8.39□□□□□ -1.07
NIPBL-203ENST00000503274 IGFALSP35858 605 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms