RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 ACER1Q8TDN7 264 aa12.91□□□□□ -0.34
USP46-204ENST00000503060 LARP4BQ92615 738 aaKnown RBP12.91□□□□□ -0.34
USP46-204ENST00000503060 RAD54LQ92698 747 aa12.91□□□□□ -0.34
USP46-204ENST00000503060 IRF2BPLQ9H1B7 796 aa12.91□□□□□ -0.34
USP46-204ENST00000503060 TAB2Q9NYJ8 693 aa12.91□□□□□ -0.34
USP46-204ENST00000503060 TPX2Q9ULW0 747 aaKnown RBP12.91□□□□□ -0.34
USP46-204ENST00000503060 TMX2Q9Y320 296 aa12.91□□□□□ -0.34
USP46-204ENST00000503060 AKR1B15C9JRZ8 316 aaPredicted RBP12.91□□□□□ -0.34
USP46-204ENST00000503060 N4BP3O15049 544 aa12.91□□□□□ -0.34
USP46-204ENST00000503060 TBC1D12O60347 775 aa12.91□□□□□ -0.34
USP46-204ENST00000503060 STX10O60499 249 aa12.91□□□□□ -0.34
USP46-204ENST00000503060 USH1GQ495M9 461 aa12.91□□□□□ -0.34
USP46-204ENST00000503060 MOXD1Q6UVY6 613 aa12.91□□□□□ -0.34
USP46-204ENST00000503060 FAM83AQ86UY5 434 aa12.91□□□□□ -0.34
USP46-204ENST00000503060 PPFIBP1Q86W92 1011 aa12.91□□□□□ -0.34
USP46-204ENST00000503060 IRF2BP1Q8IU81 584 aa12.91□□□□□ -0.34
USP46-204ENST00000503060 SPICE1Q8N0Z3 855 aa12.91□□□□□ -0.34
USP46-204ENST00000503060 ZBED3Q96IU2 234 aaPredicted RBP12.91□□□□□ -0.34
USP46-204ENST00000503060 P2RX7Q99572 595 aaKnown RBP12.91□□□□□ -0.34
USP46-204ENST00000503060 TMEM39BQ9GZU3 492 aa12.91□□□□□ -0.34
USP46-204ENST00000503060 PRR12Q9ULL5 1215 aa12.91□□□□□ -0.34
USP46-204ENST00000503060 ITIH6Q6UXX5 1313 aa12.91□□□□□ -0.34
USP46-204ENST00000503060 MYMKA6NI61 221 aa12.9□□□□□ -0.34
USP46-204ENST00000503060 PPP1R2P41236 205 aa12.9□□□□□ -0.34
USP46-204ENST00000503060 STK4Q13043 487 aa12.9□□□□□ -0.34
USP46-204ENST00000503060 KIAA1755Q5JYT7 1200 aa12.9□□□□□ -0.34
USP46-204ENST00000503060 TTI2Q6NXR4 508 aa12.9□□□□□ -0.34
USP46-204ENST00000503060 CDAN1Q8IWY9 1227 aa12.9□□□□□ -0.34
USP46-204ENST00000503060 CRYGNQ8WXF5 182 aa12.9□□□□□ -0.34
USP46-204ENST00000503060 GJA10Q969M2 543 aa12.9□□□□□ -0.34
USP46-204ENST00000503060 TRIM47Q96LD4 638 aa12.9□□□□□ -0.34
USP46-204ENST00000503060 VPS16Q9H269 839 aa12.9□□□□□ -0.34
USP46-204ENST00000503060 THAP9Q9H5L6 903 aa12.9□□□□□ -0.34
USP46-204ENST00000503060 KCNMB3Q9NPA1 279 aa12.9□□□□□ -0.34
USP46-204ENST00000503060 PCDHA12Q9UN75 941 aa12.9□□□□□ -0.34
USP46-204ENST00000503060 CCNE1P24864 410 aa12.9□□□□□ -0.34
USP46-204ENST00000503060 ARHGAP4P98171 946 aa12.9□□□□□ -0.34
USP46-204ENST00000503060 RBL2Q08999 1139 aa12.9□□□□□ -0.34
USP46-204ENST00000503060 COBLL1Q53SF7 1204 aa12.9□□□□□ -0.34
USP46-204ENST00000503060 CNNM4Q6P4Q7 775 aa12.9□□□□□ -0.34
USP46-204ENST00000503060 UNC13DQ70J99 1090 aa12.9□□□□□ -0.34
USP46-204ENST00000503060 NOC3LQ8WTT2 800 aaKnown RBP12.9□□□□□ -0.34
USP46-204ENST00000503060 P2RX5Q93086 422 aa12.9□□□□□ -0.34
USP46-204ENST00000503060 ITFG2Q969R8 447 aa12.9□□□□□ -0.34
USP46-204ENST00000503060 PANX2Q96RD6 677 aa12.9□□□□□ -0.34
USP46-204ENST00000503060 GOPCQ9HD26 462 aa12.9□□□□□ -0.34
USP46-204ENST00000503060 PVALEFA0A1B0GWK0 134 aa12.89□□□□□ -0.35
USP46-204ENST00000503060 ZBTB7AO95365 584 aa12.89□□□□□ -0.35
USP46-204ENST00000503060 FOSP01100 380 aaPredicted RBP12.89□□□□□ -0.35
USP46-204ENST00000503060 FAM200BP0CF97 657 aa12.89□□□□□ -0.35
USP46-204ENST00000503060 FCER1AP12319 257 aa12.89□□□□□ -0.35
USP46-204ENST00000503060 TAL1P17542 331 aaPredicted RBP12.89□□□□□ -0.35
USP46-204ENST00000503060 EEF1GP26641 437 aaKnown RBP12.89□□□□□ -0.35
USP46-204ENST00000503060 STAT2P52630 851 aa12.89□□□□□ -0.35
USP46-204ENST00000503060 DALRD3Q5D0E6 543 aaKnown RBP12.89□□□□□ -0.35
USP46-204ENST00000503060 CIAPIN1Q6FI81 312 aa12.89□□□□□ -0.35
USP46-204ENST00000503060 KCNK18Q7Z418 384 aa12.89□□□□□ -0.35
USP46-204ENST00000503060 DUSP9Q99956 384 aaKnown RBP12.89□□□□□ -0.35
USP46-204ENST00000503060 SRRTQ9BXP5 876 aaKnown RBP12.89□□□□□ -0.35
USP46-204ENST00000503060 LRRC27Q9C0I9 530 aa12.89□□□□□ -0.35
USP46-204ENST00000503060 BICDL2A1A5D9 508 aa12.89□□□□□ -0.35
USP46-204ENST00000503060 SPDYE3A6NKU9 549 aa12.89□□□□□ -0.35
USP46-204ENST00000503060 EIF3JO75822 258 aaKnown RBP12.89□□□□□ -0.35
USP46-204ENST00000503060 TCF3P15923 654 aa12.89□□□□□ -0.35
USP46-204ENST00000503060 ECM1Q16610 540 aa12.89□□□□□ -0.35
USP46-204ENST00000503060 HYIQ5T013 277 aa12.89□□□□□ -0.35
USP46-204ENST00000503060 FAM83BQ5T0W9 1011 aa12.89□□□□□ -0.35
USP46-204ENST00000503060 KIAA0895Q8NCT3 520 aa12.89□□□□□ -0.35
USP46-204ENST00000503060 MRRFQ96E11 262 aaKnown RBP12.89□□□□□ -0.35
USP46-204ENST00000503060 KDM4CQ9H3R0 1056 aa12.89□□□□□ -0.35
USP46-204ENST00000503060 PGAP2Q9UHJ9 254 aa12.89□□□□□ -0.35
USP46-204ENST00000503060 ZHX1Q9UKY1 873 aaPredicted RBP12.89□□□□□ -0.35
USP46-204ENST00000503060 KDM3AQ9Y4C1 1321 aa12.89□□□□□ -0.35
USP46-204ENST00000503060 OPLAHO14841 1288 aa12.88□□□□□ -0.35
USP46-204ENST00000503060 ZSCAN12O43309 604 aa12.88□□□□□ -0.35
USP46-204ENST00000503060 SLC26A4O43511 780 aa12.88□□□□□ -0.35
USP46-204ENST00000503060 TUBB4AP04350 444 aa12.88□□□□□ -0.35
USP46-204ENST00000503060 SREBF1P36956 1147 aa12.88□□□□□ -0.35
USP46-204ENST00000503060 MIGA2Q7L4E1 593 aa12.88□□□□□ -0.35
USP46-204ENST00000503060 RPAINQ86UA6 219 aa12.88□□□□□ -0.35
USP46-204ENST00000503060 REXO1L1PQ8IX06 675 aa12.88□□□□□ -0.35
USP46-204ENST00000503060 KIF18AQ8NI77 898 aa12.88□□□□□ -0.35
USP46-204ENST00000503060 TSC1Q92574 1164 aa12.88□□□□□ -0.35
USP46-204ENST00000503060 TAOK3Q9H2K8 898 aa12.88□□□□□ -0.35
USP46-204ENST00000503060 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.88□□□□□ -0.35
USP46-204ENST00000503060 WNT10BO00744 389 aa12.88□□□□□ -0.35
USP46-204ENST00000503060 MFAP3LO75121 409 aa12.88□□□□□ -0.35
USP46-204ENST00000503060 CAP2P40123 477 aa12.88□□□□□ -0.35
USP46-204ENST00000503060 TRAF1Q13077 416 aa12.88□□□□□ -0.35
USP46-204ENST00000503060 Q4G0T1 1027 aa12.88□□□□□ -0.35
USP46-204ENST00000503060 DYMQ7RTS9 669 aa12.88□□□□□ -0.35
USP46-204ENST00000503060 C11orf96Q7Z7L8 435 aa12.88□□□□□ -0.35
USP46-204ENST00000503060 SLFN12Q8IYM2 578 aa12.88□□□□□ -0.35
USP46-204ENST00000503060 CSGALNACT2Q8N6G5 542 aa12.88□□□□□ -0.35
USP46-204ENST00000503060 CPLX3Q8WVH0 158 aa12.88□□□□□ -0.35
USP46-204ENST00000503060 HPS3Q969F9 1004 aa12.88□□□□□ -0.35
USP46-204ENST00000503060 UIMC1Q96RL1 719 aa12.88□□□□□ -0.35
USP46-204ENST00000503060 VCPKMTQ9H867 229 aa12.88□□□□□ -0.35
USP46-204ENST00000503060 PPP2R2CQ9Y2T4 447 aa12.88□□□□□ -0.35
USP46-204ENST00000503060 CTIFO43310 598 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms