RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 USP38Q8NB14 1042 aa12.46□□□□□ -0.41
SNCA-207ENST00000502987 SYMPKQ92797 1274 aaKnown RBP12.46□□□□□ -0.41
SNCA-207ENST00000502987 ALG1Q9BT22 464 aa12.46□□□□□ -0.41
SNCA-207ENST00000502987 PXMP2Q9NR77 195 aa12.46□□□□□ -0.41
SNCA-207ENST00000502987 YBX2Q9Y2T7 364 aaKnown RBP12.46□□□□□ -0.41
SNCA-207ENST00000502987 ZBTB5O15062 677 aa12.45□□□□□ -0.42
SNCA-207ENST00000502987 MMP3P08254 477 aa12.45□□□□□ -0.42
SNCA-207ENST00000502987 IQCF3P0C7M6 154 aa12.45□□□□□ -0.42
SNCA-207ENST00000502987 GSPT1P15170 499 aaKnown RBP12.45□□□□□ -0.42
SNCA-207ENST00000502987 MYOGP15173 224 aa12.45□□□□□ -0.42
SNCA-207ENST00000502987 HOXA13P31271 388 aaPredicted RBP12.45□□□□□ -0.42
SNCA-207ENST00000502987 RFC2P35250 354 aa12.45□□□□□ -0.42
SNCA-207ENST00000502987 PTH1RQ03431 593 aa12.45□□□□□ -0.42
SNCA-207ENST00000502987 ARHGAP1Q07960 439 aa12.45□□□□□ -0.42
SNCA-207ENST00000502987 TRAF1Q13077 416 aa12.45□□□□□ -0.42
SNCA-207ENST00000502987 WTAPQ15007 396 aa12.45□□□□□ -0.42
SNCA-207ENST00000502987 SEC23AQ15436 765 aa12.45□□□□□ -0.42
SNCA-207ENST00000502987 FCHSD1Q86WN1 690 aa12.45□□□□□ -0.42
SNCA-207ENST00000502987 MICALL1Q8N3F8 863 aa12.45□□□□□ -0.42
SNCA-207ENST00000502987 C7orf31Q8N865 590 aa12.45□□□□□ -0.42
SNCA-207ENST00000502987 PIBF1Q8WXW3 757 aa12.45□□□□□ -0.42
SNCA-207ENST00000502987 IL25Q9H293 177 aa12.45□□□□□ -0.42
SNCA-207ENST00000502987 MAD2L2Q9UI95 211 aa12.45□□□□□ -0.42
SNCA-207ENST00000502987 PCDHA11Q9Y5I1 949 aa12.45□□□□□ -0.42
SNCA-207ENST00000502987 CHD7Q9P2D1 2997 aa12.44□□□□□ -0.42
SNCA-207ENST00000502987 KIF28PB7ZC32 967 aa12.44□□□□□ -0.42
SNCA-207ENST00000502987 CYP21A2P08686 494 aa12.44□□□□□ -0.42
SNCA-207ENST00000502987 CHMLP26374 656 aa12.44□□□□□ -0.42
SNCA-207ENST00000502987 LAMC2Q13753 1193 aa12.44□□□□□ -0.42
SNCA-207ENST00000502987 TMEM67Q5HYA8 995 aa12.44□□□□□ -0.42
SNCA-207ENST00000502987 GDF6Q6KF10 455 aaPredicted RBP12.44□□□□□ -0.42
SNCA-207ENST00000502987 NCOA7Q8NI08 942 aa12.44□□□□□ -0.42
SNCA-207ENST00000502987 PIGSQ96S52 555 aa12.44□□□□□ -0.42
SNCA-207ENST00000502987 DDX41Q9UJV9 622 aaKnown RBP12.44□□□□□ -0.42
SNCA-207ENST00000502987 VCANP13611 3396 aa12.43□□□□□ -0.42
SNCA-207ENST00000502987 PALM3A6NDB9 673 aaPredicted RBP12.43□□□□□ -0.42
SNCA-207ENST00000502987 E7EWF7 191 aa12.43□□□□□ -0.42
SNCA-207ENST00000502987 GCOM1H8Y6P7 765 aaPredicted RBP12.43□□□□□ -0.42
SNCA-207ENST00000502987 POLR2MP0CAP2 368 aa12.43□□□□□ -0.42
SNCA-207ENST00000502987 CCND2P30279 289 aa12.43□□□□□ -0.42
SNCA-207ENST00000502987 KCNJ6P48051 423 aa12.43□□□□□ -0.42
SNCA-207ENST00000502987 PSEN2P49810 448 aa12.43□□□□□ -0.42
SNCA-207ENST00000502987 HSD17B4P51659 736 aa12.43□□□□□ -0.42
SNCA-207ENST00000502987 KCNV1Q6PIU1 500 aa12.43□□□□□ -0.42
SNCA-207ENST00000502987 CATIPQ7Z7H3 387 aa12.43□□□□□ -0.42
SNCA-207ENST00000502987 IL27Q8NEV9 243 aa12.43□□□□□ -0.42
SNCA-207ENST00000502987 PDCD2LQ9BRP1 358 aa12.43□□□□□ -0.42
SNCA-207ENST00000502987 ZBED2Q9BTP6 218 aa12.43□□□□□ -0.42
SNCA-207ENST00000502987 KATNAL1Q9BW62 490 aa12.43□□□□□ -0.42
SNCA-207ENST00000502987 CERS4Q9HA82 394 aa12.43□□□□□ -0.42
SNCA-207ENST00000502987 PRDM6Q9NQX0 595 aa12.43□□□□□ -0.42
SNCA-207ENST00000502987 MAP3K20Q9NYL2 800 aaKnown RBP12.43□□□□□ -0.42
SNCA-207ENST00000502987 TRANK1O15050 2925 aa12.43□□□□□ -0.42
SNCA-207ENST00000502987 PPP1R11O60927 126 aaPredicted RBP12.42□□□□□ -0.42
SNCA-207ENST00000502987 ZNF286BP0CG31 522 aa12.42□□□□□ -0.42
SNCA-207ENST00000502987 ADGRE1Q14246 886 aa12.42□□□□□ -0.42
SNCA-207ENST00000502987 MFSD10Q14728 455 aa12.42□□□□□ -0.42
SNCA-207ENST00000502987 GRM4Q14833 912 aa12.42□□□□□ -0.42
SNCA-207ENST00000502987 SKIV2LQ15477 1246 aaKnown RBP12.42□□□□□ -0.42
SNCA-207ENST00000502987 KIAA0753Q2KHM9 967 aa12.42□□□□□ -0.42
SNCA-207ENST00000502987 TJAP1Q5JTD0 557 aa12.42□□□□□ -0.42
SNCA-207ENST00000502987 STOX1Q6ZVD7 989 aa12.42□□□□□ -0.42
SNCA-207ENST00000502987 TET1Q8NFU7 2136 aa12.42□□□□□ -0.42
SNCA-207ENST00000502987 CAGE1Q8TC20 777 aa12.42□□□□□ -0.42
SNCA-207ENST00000502987 AFAP1L1Q8TED9 768 aa12.42□□□□□ -0.42
SNCA-207ENST00000502987 KAT2BQ92831 832 aa12.42□□□□□ -0.42
SNCA-207ENST00000502987 VWCEQ96DN2 955 aa12.42□□□□□ -0.42
SNCA-207ENST00000502987 MTMR8Q96EF0 704 aa12.42□□□□□ -0.42
SNCA-207ENST00000502987 SPATA33Q96N06 139 aa12.42□□□□□ -0.42
SNCA-207ENST00000502987 SLC9A7Q96T83 725 aa12.42□□□□□ -0.42
SNCA-207ENST00000502987 MLXIPQ9HAP2 919 aa12.42□□□□□ -0.42
SNCA-207ENST00000502987 HDAC6Q9UBN7 1215 aa12.42□□□□□ -0.42
SNCA-207ENST00000502987 REV3LO60673 3130 aa12.42□□□□□ -0.42
SNCA-207ENST00000502987 TANC1Q9C0D5 1861 aa12.42□□□□□ -0.42
SNCA-207ENST00000502987 PNMA6FA0A0J9YX94 578 aa12.41□□□□□ -0.42
SNCA-207ENST00000502987 OPLAHO14841 1288 aa12.41□□□□□ -0.42
SNCA-207ENST00000502987 GTPBP6O43824 516 aaPredicted RBP12.41□□□□□ -0.42
SNCA-207ENST00000502987 GGPS1O95749 300 aa12.41□□□□□ -0.42
SNCA-207ENST00000502987 CA3P07451 260 aa12.41□□□□□ -0.42
SNCA-207ENST00000502987 SELPP16109 830 aa12.41□□□□□ -0.42
SNCA-207ENST00000502987 PGM5Q15124 567 aa12.41□□□□□ -0.42
SNCA-207ENST00000502987 CASC1Q6TDU7 716 aa12.41□□□□□ -0.42
SNCA-207ENST00000502987 NFXL1Q6ZNB6 911 aa12.41□□□□□ -0.42
SNCA-207ENST00000502987 LRRC8DQ7L1W4 858 aa12.41□□□□□ -0.42
SNCA-207ENST00000502987 VSIG10LQ86VR7 867 aa12.41□□□□□ -0.42
SNCA-207ENST00000502987 SAMD3Q8N6K7 520 aa12.41□□□□□ -0.42
SNCA-207ENST00000502987 PPTC7Q8NI37 304 aa12.41□□□□□ -0.42
SNCA-207ENST00000502987 PHOSPHO2Q8TCD6 241 aa12.41□□□□□ -0.42
SNCA-207ENST00000502987 RIOX1Q9H6W3 641 aa12.41□□□□□ -0.42
SNCA-207ENST00000502987 SENP2Q9HC62 589 aa12.41□□□□□ -0.42
SNCA-207ENST00000502987 THEGQ9P2T0 379 aa12.41□□□□□ -0.42
SNCA-207ENST00000502987 GTF2IRD1Q9UHL9 959 aa12.41□□□□□ -0.42
SNCA-207ENST00000502987 RFXAPO00287 272 aa12.4□□□□□ -0.42
SNCA-207ENST00000502987 SGSM2O43147 1006 aa12.4□□□□□ -0.42
SNCA-207ENST00000502987 TLL1O43897 1013 aa12.4□□□□□ -0.42
SNCA-207ENST00000502987 PPFIA4O75335 1185 aa12.4□□□□□ -0.42
SNCA-207ENST00000502987 CELF3Q5SZQ8 465 aaKnown RBP12.4□□□□□ -0.42
SNCA-207ENST00000502987 MYSM1Q5VVJ2 828 aa12.4□□□□□ -0.42
SNCA-207ENST00000502987 SESTD1Q86VW0 696 aa12.4□□□□□ -0.42
SNCA-207ENST00000502987 HERC6Q8IVU3 1022 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms