RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 KDM3AQ9Y4C1 1321 aa15.19■□□□□ 0.02
SGCA-203ENST00000502555 LOC102724159A0A0B4J2E5 919 aa15.19■□□□□ 0.02
SGCA-203ENST00000502555 POTEMA6NI47 508 aa15.19■□□□□ 0.02
SGCA-203ENST00000502555 B4DLN1 442 aa15.19■□□□□ 0.02
SGCA-203ENST00000502555 IGF2BP3O00425 579 aaKnown RBP eCLIP15.19■□□□□ 0.02
SGCA-203ENST00000502555 FCER1AP12319 257 aa15.19■□□□□ 0.02
SGCA-203ENST00000502555 YY1P25490 414 aa15.19■□□□□ 0.02
SGCA-203ENST00000502555 STAT6P42226 847 aa15.19■□□□□ 0.02
SGCA-203ENST00000502555 SPIRE1Q08AE8 756 aa15.19■□□□□ 0.02
SGCA-203ENST00000502555 MTMR1Q13613 665 aa15.19■□□□□ 0.02
SGCA-203ENST00000502555 KARSQ15046 597 aaKnown RBP15.19■□□□□ 0.02
SGCA-203ENST00000502555 PWP2Q15269 919 aaKnown RBP15.19■□□□□ 0.02
SGCA-203ENST00000502555 RRAGBQ5VZM2 374 aa15.19■□□□□ 0.02
SGCA-203ENST00000502555 NLRX1Q86UT6 975 aa15.19■□□□□ 0.02
SGCA-203ENST00000502555 IFNL1Q8IU54 200 aa15.19■□□□□ 0.02
SGCA-203ENST00000502555 CKAP2LQ8IYA6 745 aa15.19■□□□□ 0.02
SGCA-203ENST00000502555 ABRAQ8N0Z2 381 aa15.19■□□□□ 0.02
SGCA-203ENST00000502555 ZNF784Q8NCA9 323 aaPredicted RBP15.19■□□□□ 0.02
SGCA-203ENST00000502555 ERMNQ8TAM6 284 aa15.19■□□□□ 0.02
SGCA-203ENST00000502555 CALML4Q96GE6 196 aa15.19■□□□□ 0.02
SGCA-203ENST00000502555 INPP4AQ96PE3 977 aaPredicted RBP15.19■□□□□ 0.02
SGCA-203ENST00000502555 PURBQ96QR8 312 aaKnown RBP15.19■□□□□ 0.02
SGCA-203ENST00000502555 MPHOSPH6Q99547 160 aaKnown RBP15.19■□□□□ 0.02
SGCA-203ENST00000502555 ZNF577Q9BSK1 485 aa15.19■□□□□ 0.02
SGCA-203ENST00000502555 MMTAG2Q9BU76 263 aaKnown RBP15.19■□□□□ 0.02
SGCA-203ENST00000502555 SERTAD1Q9UHV2 236 aa15.19■□□□□ 0.02
SGCA-203ENST00000502555 VAV3Q9UKW4 847 aa15.19■□□□□ 0.02
SGCA-203ENST00000502555 DNAJC25-GNG10A0A024R161 153 aa15.18■□□□□ 0.02
SGCA-203ENST00000502555 IPO5O00410 1097 aaKnown RBP15.18■□□□□ 0.02
SGCA-203ENST00000502555 MAFGO15525 162 aa15.18■□□□□ 0.02
SGCA-203ENST00000502555 GAS7O60861 476 aa15.18■□□□□ 0.02
SGCA-203ENST00000502555 PSMD10O75832 226 aa15.18■□□□□ 0.02
SGCA-203ENST00000502555 CCDC192P0DO97 292 aa15.18■□□□□ 0.02
SGCA-203ENST00000502555 MYCLP12524 364 aaPredicted RBP15.18■□□□□ 0.02
SGCA-203ENST00000502555 EDNRBP24530 442 aa15.18■□□□□ 0.02
SGCA-203ENST00000502555 CDC25AP30304 524 aa15.18■□□□□ 0.02
SGCA-203ENST00000502555 ALDH5A1P51649 535 aaPredicted RBP15.18■□□□□ 0.02
SGCA-203ENST00000502555 PPP2R5CQ13362 524 aa15.18■□□□□ 0.02
SGCA-203ENST00000502555 LRCH2Q5VUJ6 765 aa15.18■□□□□ 0.02
SGCA-203ENST00000502555 HAUS3Q68CZ6 603 aa15.18■□□□□ 0.02
SGCA-203ENST00000502555 SNX29Q8TEQ0 813 aa15.18■□□□□ 0.02
SGCA-203ENST00000502555 CDHR1Q96JP9 859 aa15.18■□□□□ 0.02
SGCA-203ENST00000502555 FUCA2Q9BTY2 467 aa15.18■□□□□ 0.02
SGCA-203ENST00000502555 PANK2Q9BZ23 570 aa15.18■□□□□ 0.02
SGCA-203ENST00000502555 PORCNQ9H237 461 aa15.18■□□□□ 0.02
SGCA-203ENST00000502555 AGO4Q9HCK5 861 aaKnown RBP15.18■□□□□ 0.02
SGCA-203ENST00000502555 KCNH7Q9NS40 1196 aa15.18■□□□□ 0.02
SGCA-203ENST00000502555 STK17AQ9UEE5 414 aa15.18■□□□□ 0.02
SGCA-203ENST00000502555 STRNO43815 780 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 ARP10275 920 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 MAPK4P31152 587 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 TM4SF4P48230 202 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 CNTN2Q02246 1040 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 POSTNQ15063 836 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 TAF1CQ15572 869 aaPredicted RBP15.17■□□□□ 0.02
SGCA-203ENST00000502555 STXBP2Q15833 593 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 GNPTABQ3T906 1256 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 HYIQ5T013 277 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 WDR78Q5VTH9 848 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 PDXDC2PQ6P474 469 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 SASS6Q6UVJ0 657 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 SH3RF1Q7Z6J0 888 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 KCTD17Q8N5Z5 321 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 GJA10Q969M2 543 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 CDK5RAP3Q96JB5 506 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 TEKT3Q9BXF9 490 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 TSPY26PQ9H489 355 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 EFCC1Q9HA90 598 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 CREBZFQ9NS37 354 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 TBC1D22BQ9NU19 505 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 KIAA1468Q9P260 1216 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 ASTN1O14525 1302 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 SOWAHBA6NEL2 793 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 RASSF10A6NK89 507 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 EIF3JO75822 258 aaKnown RBP15.17■□□□□ 0.02
SGCA-203ENST00000502555 MYL1P05976 194 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 PLCG1P19174 1290 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 MDM2Q00987 491 aaPredicted RBP15.17■□□□□ 0.02
SGCA-203ENST00000502555 NOGQ13253 232 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 TMEM119Q4V9L6 283 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 NAALADL2Q58DX5 795 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 NCAPH2Q6IBW4 605 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 OTOP1Q7RTM1 612 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 PAGE5Q96GU1 130 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 NT5C3AQ9H0P0 336 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 ZFYVE28Q9HCC9 887 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 TUBE1Q9UJT0 475 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 IVNS1ABPQ9Y6Y0 642 aa15.17■□□□□ 0.02
SGCA-203ENST00000502555 FSD2A1L4K1 749 aa15.16■□□□□ 0.02
SGCA-203ENST00000502555 CCT6AP40227 531 aaKnown RBP15.16■□□□□ 0.02
SGCA-203ENST00000502555 TYRO3Q06418 890 aa15.16■□□□□ 0.02
SGCA-203ENST00000502555 GRB10Q13322 594 aa15.16■□□□□ 0.02
SGCA-203ENST00000502555 ZRSR1Q15695 479 aaKnown RBP15.16■□□□□ 0.02
SGCA-203ENST00000502555 B3GNT9Q6UX72 402 aa15.16■□□□□ 0.02
SGCA-203ENST00000502555 PAXIP1Q6ZW49 1069 aaPredicted RBP15.16■□□□□ 0.02
SGCA-203ENST00000502555 REM2Q8IYK8 340 aaPredicted RBP15.16■□□□□ 0.02
SGCA-203ENST00000502555 ZFP91Q96JP5 570 aaPredicted RBP15.16■□□□□ 0.02
SGCA-203ENST00000502555 PNMA5Q96PV4 448 aa15.16■□□□□ 0.02
SGCA-203ENST00000502555 R3HDMLQ9H3Y0 253 aa15.16■□□□□ 0.02
SGCA-203ENST00000502555 TCEAL9Q9UHQ7 104 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms