RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 JAK2O60674 1132 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 CABYRO75952 493 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 GGPS1O95749 300 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 MYL3P08590 195 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 ITGB5P18084 799 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 UBA1P22314 1058 aaKnown RBP8.34□□□□□ -1.07
USP46-203ENST00000502443 ICAM3P32942 547 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 ZNF76P36508 570 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 SREBF1P36956 1147 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 RTP1P59025 263 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 ARHGAP4P98171 946 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 SP2Q02086 613 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 ARHGAP1Q07960 439 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 MAPK8IP2Q13387 824 aaPredicted RBP8.34□□□□□ -1.07
USP46-203ENST00000502443 LAMC2Q13753 1193 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 SNX17Q15036 470 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 TRIM60Q495X7 471 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 CELF3Q5SZQ8 465 aaKnown RBP8.34□□□□□ -1.07
USP46-203ENST00000502443 MYSM1Q5VVJ2 828 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 MCTP2Q6DN12 878 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 CCDC83Q8IWF9 413 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 NSUN7Q8NE18 718 aaKnown RBP8.34□□□□□ -1.07
USP46-203ENST00000502443 IL27Q8NEV9 243 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 RASGRP4Q8TDF6 673 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 WASF1Q92558 559 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 EMID1Q96A84 441 aaPredicted RBP8.34□□□□□ -1.07
USP46-203ENST00000502443 ALG1Q9BT22 464 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 MLXIPQ9HAP2 919 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 SH2B1Q9NRF2 756 aaPredicted RBP8.34□□□□□ -1.07
USP46-203ENST00000502443 POLR3EQ9NVU0 708 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 PCDHA4Q9UN74 947 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 KCNJ14Q9UNX9 436 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 ATP11BQ9Y2G3 1177 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 DOCK5Q9H7D0 1870 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 ELP1O95163 1332 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 A0A0U1RQG5 324 aaPredicted RBP8.33□□□□□ -1.08
USP46-203ENST00000502443 NOP56O00567 594 aaKnown RBP8.33□□□□□ -1.08
USP46-203ENST00000502443 MAFGO15525 162 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 KPNA6O60684 536 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 PQBP1O60828 265 aaKnown RBP8.33□□□□□ -1.08
USP46-203ENST00000502443 MMP3P08254 477 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 FDPSP14324 419 aaKnown RBP8.33□□□□□ -1.08
USP46-203ENST00000502443 SYN1P17600 705 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 CHMP4BP1P59074 171 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 PSMC6P62333 389 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 PURAQ00577 322 aaKnown RBP8.33□□□□□ -1.08
USP46-203ENST00000502443 ST3GAL1Q11201 340 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 SEMA3FQ13275 785 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 MTMR1Q13613 665 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 ITGA7Q13683 1181 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 NEDD9Q14511 834 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 DGKDQ16760 1214 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 CEP55Q53EZ4 464 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 PDE4DIPQ5VU43 2346 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 C1orf53Q5VUE5 145 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 GALNT17Q6IS24 598 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 CYFIP1Q7L576 1253 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 BLIDQ8IZY5 108 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 FAM177A1Q8N128 213 aaPredicted RBP8.33□□□□□ -1.08
USP46-203ENST00000502443 PPTC7Q8NI37 304 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 CYP2W1Q8TAV3 490 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 GPRASP2Q96D09 838 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 CDHR1Q96JP9 859 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 SPATA33Q96N06 139 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 SENP7Q9BQF6 1050 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 MXRA8Q9BRK3 442 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 LLPHQ9BRT6 129 aaKnown RBP8.33□□□□□ -1.08
USP46-203ENST00000502443 MTG1Q9BT17 334 aaPredicted RBP8.33□□□□□ -1.08
USP46-203ENST00000502443 PHF20Q9BVI0 1012 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 BCAS3Q9H6U6 928 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 JADE2Q9NQC1 790 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 GJB4Q9NTQ9 266 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 PKD2L1Q9P0L9 805 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 UBIAD1Q9Y5Z9 338 aa8.33□□□□□ -1.08
USP46-203ENST00000502443 DCDC2CA8MYV0 355 aa8.32□□□□□ -1.08
USP46-203ENST00000502443 ARVCFO00192 962 aa8.32□□□□□ -1.08
USP46-203ENST00000502443 ATP9AO75110 1047 aa8.32□□□□□ -1.08
USP46-203ENST00000502443 CD2BP2O95400 341 aaKnown RBP8.32□□□□□ -1.08
USP46-203ENST00000502443 CYP3A4P08684 503 aa8.32□□□□□ -1.08
USP46-203ENST00000502443 FOSBP53539 338 aa8.32□□□□□ -1.08
USP46-203ENST00000502443 SP4Q02446 784 aa8.32□□□□□ -1.08
USP46-203ENST00000502443 TLE2Q04725 743 aa8.32□□□□□ -1.08
USP46-203ENST00000502443 NPY5RQ15761 445 aa8.32□□□□□ -1.08
USP46-203ENST00000502443 HSDL1Q3SXM5 330 aa8.32□□□□□ -1.08
USP46-203ENST00000502443 PRPF38BQ5VTL8 546 aaKnown RBP8.32□□□□□ -1.08
USP46-203ENST00000502443 METTL7BQ6UX53 244 aa8.32□□□□□ -1.08
USP46-203ENST00000502443 DAGLBQ8NCG7 672 aa8.32□□□□□ -1.08
USP46-203ENST00000502443 GIMAP8Q8ND71 665 aaPredicted RBP8.32□□□□□ -1.08
USP46-203ENST00000502443 CRYGNQ8WXF5 182 aa8.32□□□□□ -1.08
USP46-203ENST00000502443 PRDM5Q9NQX1 630 aaPredicted RBP8.32□□□□□ -1.08
USP46-203ENST00000502443 KCNH7Q9NS40 1196 aa8.32□□□□□ -1.08
USP46-203ENST00000502443 PRKAG2Q9UGJ0 569 aa8.32□□□□□ -1.08
USP46-203ENST00000502443 ZMYND8Q9ULU4 1186 aaPredicted RBP8.32□□□□□ -1.08
USP46-203ENST00000502443 GRIN2DO15399 1336 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 MROH7Q68CQ1 1323 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 CCDC194A0A1B0GVG4 234 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 FAM86B1E9PN63 330 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 M0R2N6 131 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 MEIS1O00470 390 aa8.31□□□□□ -1.08
USP46-203ENST00000502443 PPFIA4O75335 1185 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms