RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 HAS3O00219 553 aa22.76■■□□□ 1.23
SFXN1-203ENST00000502393 PIK3CDO00329 1044 aa22.76■■□□□ 1.23
SFXN1-203ENST00000502393 ZNF286BP0CG31 522 aa22.76■■□□□ 1.23
SFXN1-203ENST00000502393 ATP2A2P16615 1042 aaKnown RBP22.76■■□□□ 1.23
SFXN1-203ENST00000502393 UBA1P22314 1058 aaKnown RBP22.76■■□□□ 1.23
SFXN1-203ENST00000502393 COL9A3Q14050 684 aaPredicted RBP22.76■■□□□ 1.23
SFXN1-203ENST00000502393 MFSD10Q14728 455 aa22.76■■□□□ 1.23
SFXN1-203ENST00000502393 KIAA0753Q2KHM9 967 aa22.76■■□□□ 1.23
SFXN1-203ENST00000502393 HSDL1Q3SXM5 330 aa22.76■■□□□ 1.23
SFXN1-203ENST00000502393 SRBD1Q8N5C6 995 aaKnown RBP22.76■■□□□ 1.23
SFXN1-203ENST00000502393 AFAP1L1Q8TED9 768 aa22.76■■□□□ 1.23
SFXN1-203ENST00000502393 CUL5Q93034 780 aa22.76■■□□□ 1.23
SFXN1-203ENST00000502393 SLC28A3Q9HAS3 691 aa22.76■■□□□ 1.23
SFXN1-203ENST00000502393 HDAC6Q9UBN7 1215 aa22.76■■□□□ 1.23
SFXN1-203ENST00000502393 SLC12A7Q9Y666 1083 aa22.76■■□□□ 1.23
SFXN1-203ENST00000502393 PLEKHA8P1O95397 391 aa22.75■■□□□ 1.23
SFXN1-203ENST00000502393 MRPS9P82933 396 aaKnown RBP22.75■■□□□ 1.23
SFXN1-203ENST00000502393 SMARCC2Q8TAQ2 1214 aa22.75■■□□□ 1.23
SFXN1-203ENST00000502393 ZFP91Q96JP5 570 aaPredicted RBP22.75■■□□□ 1.23
SFXN1-203ENST00000502393 INPP4AQ96PE3 977 aaPredicted RBP22.75■■□□□ 1.23
SFXN1-203ENST00000502393 ALG1Q9BT22 464 aa22.75■■□□□ 1.23
SFXN1-203ENST00000502393 NKX2-4Q9H2Z4 354 aa22.75■■□□□ 1.23
SFXN1-203ENST00000502393 MLXIPQ9HAP2 919 aa22.75■■□□□ 1.23
SFXN1-203ENST00000502393 YBX2Q9Y2T7 364 aaKnown RBP22.75■■□□□ 1.23
SFXN1-203ENST00000502393 PCDHA11Q9Y5I1 949 aa22.75■■□□□ 1.23
SFXN1-203ENST00000502393 PARNO95453 639 aaKnown RBP22.74■■□□□ 1.23
SFXN1-203ENST00000502393 ICAM3P32942 547 aa22.74■■□□□ 1.23
SFXN1-203ENST00000502393 RBL2Q08999 1139 aa22.74■■□□□ 1.23
SFXN1-203ENST00000502393 XRRA1Q6P2D8 792 aa22.74■■□□□ 1.23
SFXN1-203ENST00000502393 SGMS1Q86VZ5 419 aa22.74■■□□□ 1.23
SFXN1-203ENST00000502393 SKAP1Q86WV1 359 aa22.74■■□□□ 1.23
SFXN1-203ENST00000502393 GPKOWQ92917 476 aaPredicted RBP eCLIP22.74■■□□□ 1.23
SFXN1-203ENST00000502393 GAS2L1Q99501 681 aaPredicted RBP22.74■■□□□ 1.23
SFXN1-203ENST00000502393 FTOQ9C0B1 505 aaKnown RBP eCLIP22.74■■□□□ 1.23
SFXN1-203ENST00000502393 TANC1Q9C0D5 1861 aa22.73■■□□□ 1.23
SFXN1-203ENST00000502393 MYH7BA7E2Y1 1941 aa22.73■■□□□ 1.23
SFXN1-203ENST00000502393 SPATA31C2B4DYI2 1134 aa22.73■■□□□ 1.23
SFXN1-203ENST00000502393 MEIS2O14770 477 aa22.73■■□□□ 1.23
SFXN1-203ENST00000502393 SORBS3O60504 671 aa22.73■■□□□ 1.23
SFXN1-203ENST00000502393 SELPP16109 830 aa22.73■■□□□ 1.23
SFXN1-203ENST00000502393 RXRAP19793 462 aa22.73■■□□□ 1.23
SFXN1-203ENST00000502393 RABGGTBP53611 331 aa22.73■■□□□ 1.23
SFXN1-203ENST00000502393 NEDD9Q14511 834 aa22.73■■□□□ 1.23
SFXN1-203ENST00000502393 PCNX4Q63HM2 1172 aa22.73■■□□□ 1.23
SFXN1-203ENST00000502393 USP17L6PQ6QN14 398 aa22.73■■□□□ 1.23
SFXN1-203ENST00000502393 CMTR1Q8N1G2 835 aaKnown RBP22.73■■□□□ 1.23
SFXN1-203ENST00000502393 FANCBQ8NB91 859 aa22.73■■□□□ 1.23
SFXN1-203ENST00000502393 PHOSPHO2Q8TCD6 241 aa22.73■■□□□ 1.23
SFXN1-203ENST00000502393 DHX38Q92620 1227 aaKnown RBP22.73■■□□□ 1.23
SFXN1-203ENST00000502393 LRRC2Q9BYS8 371 aa22.73■■□□□ 1.23
SFXN1-203ENST00000502393 CHD9Q3L8U1 2897 aa22.73■■□□□ 1.23
SFXN1-203ENST00000502393 PRUNE2Q8WUY3 3088 aa22.73■■□□□ 1.23
SFXN1-203ENST00000502393 SCN5AQ14524 2016 aa22.72■■□□□ 1.23
SFXN1-203ENST00000502393 FIBPO43427 364 aa22.72■■□□□ 1.23
SFXN1-203ENST00000502393 PTK7Q13308 1070 aa22.72■■□□□ 1.23
SFXN1-203ENST00000502393 SYNE3Q6ZMZ3 975 aa22.72■■□□□ 1.23
SFXN1-203ENST00000502393 NEK1Q96PY6 1258 aa22.72■■□□□ 1.23
SFXN1-203ENST00000502393 SLC9A7Q96T83 725 aa22.72■■□□□ 1.23
SFXN1-203ENST00000502393 C16orf70Q9BSU1 422 aa22.72■■□□□ 1.23
SFXN1-203ENST00000502393 PRDM12Q9H4Q4 367 aa22.72■■□□□ 1.23
SFXN1-203ENST00000502393 RTEL1Q9NZ71 1219 aa22.72■■□□□ 1.23
SFXN1-203ENST00000502393 BAIAP3O94812 1187 aa22.71■■□□□ 1.23
SFXN1-203ENST00000502393 CKBP12277 381 aa22.71■■□□□ 1.23
SFXN1-203ENST00000502393 TSGA10IPQ3SY00 556 aa22.71■■□□□ 1.23
SFXN1-203ENST00000502393 METTL7BQ6UX53 244 aa22.71■■□□□ 1.23
SFXN1-203ENST00000502393 TMTC3Q6ZXV5 915 aa22.71■■□□□ 1.23
SFXN1-203ENST00000502393 LRRC8DQ7L1W4 858 aa22.71■■□□□ 1.23
SFXN1-203ENST00000502393 PSTPIP2Q9H939 334 aa22.71■■□□□ 1.23
SFXN1-203ENST00000502393 NOP56O00567 594 aaKnown RBP22.7■■□□□ 1.22
SFXN1-203ENST00000502393 PPP2R2DQ66LE6 453 aa22.7■■□□□ 1.22
SFXN1-203ENST00000502393 MICU3Q86XE3 530 aa22.7■■□□□ 1.22
SFXN1-203ENST00000502393 USP26Q9BXU7 913 aa22.7■■□□□ 1.22
SFXN1-203ENST00000502393 BCAS3Q9H6U6 928 aa22.7■■□□□ 1.22
SFXN1-203ENST00000502393 GBF1Q92538 1859 aa22.69■■□□□ 1.22
SFXN1-203ENST00000502393 H3BRB1 525 aa22.69■■□□□ 1.22
SFXN1-203ENST00000502393 CDC45O75419 566 aa22.69■■□□□ 1.22
SFXN1-203ENST00000502393 MYOGP15173 224 aa22.69■■□□□ 1.22
SFXN1-203ENST00000502393 EXOSC10Q01780 885 aaKnown RBP22.69■■□□□ 1.22
SFXN1-203ENST00000502393 SEMA3FQ13275 785 aa22.69■■□□□ 1.22
SFXN1-203ENST00000502393 GPNMBQ14956 572 aa22.69■■□□□ 1.22
SFXN1-203ENST00000502393 CYFIP1Q7L576 1253 aa22.69■■□□□ 1.22
SFXN1-203ENST00000502393 NLRX1Q86UT6 975 aa22.69■■□□□ 1.22
SFXN1-203ENST00000502393 RAB11FIP4Q86YS3 637 aa22.69■■□□□ 1.22
SFXN1-203ENST00000502393 CCDC82Q8N4S0 544 aa22.69■■□□□ 1.22
SFXN1-203ENST00000502393 SENP7Q9BQF6 1050 aa22.69■■□□□ 1.22
SFXN1-203ENST00000502393 TUT1Q9H6E5 874 aaKnown RBP22.69■■□□□ 1.22
SFXN1-203ENST00000502393 VCANP13611 3396 aa22.68■■□□□ 1.22
SFXN1-203ENST00000502393 CXCL10P02778 98 aa22.68■■□□□ 1.22
SFXN1-203ENST00000502393 LGALS2P05162 132 aa22.68■■□□□ 1.22
SFXN1-203ENST00000502393 ZNF200P98182 395 aaPredicted RBP22.68■■□□□ 1.22
SFXN1-203ENST00000502393 KRT32Q14532 448 aa22.68■■□□□ 1.22
SFXN1-203ENST00000502393 APOA5Q6Q788 366 aa22.68■■□□□ 1.22
SFXN1-203ENST00000502393 DHX32Q7L7V1 743 aaKnown RBP22.68■■□□□ 1.22
SFXN1-203ENST00000502393 COL25A1Q9BXS0 654 aaPredicted RBP22.68■■□□□ 1.22
SFXN1-203ENST00000502393 RBM28Q9NW13 759 aaKnown RBP22.68■■□□□ 1.22
SFXN1-203ENST00000502393 HIC1Q14526 733 aa22.67■■□□□ 1.22
SFXN1-203ENST00000502393 TRIM71Q2Q1W2 868 aaKnown RBP22.67■■□□□ 1.22
SFXN1-203ENST00000502393 CNKSR3Q6P9H4 555 aa22.67■■□□□ 1.22
SFXN1-203ENST00000502393 GIMAP8Q8ND71 665 aaPredicted RBP22.67■■□□□ 1.22
SFXN1-203ENST00000502393 CDHR1Q96JP9 859 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms