RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 PTGS1P23219 599 aa17.74■□□□□ 0.43
CPNE1-228ENST00000498814 KRT2P35908 639 aa17.74■□□□□ 0.43
CPNE1-228ENST00000498814 SEMA3FQ13275 785 aa17.74■□□□□ 0.43
CPNE1-228ENST00000498814 CEP55Q53EZ4 464 aa17.74■□□□□ 0.43
CPNE1-228ENST00000498814 CCSAPQ6IQ19 270 aaPredicted RBP17.74■□□□□ 0.43
CPNE1-228ENST00000498814 NIPA1Q7RTP0 329 aa17.74■□□□□ 0.43
CPNE1-228ENST00000498814 NECAB2Q7Z6G3 386 aa17.74■□□□□ 0.43
CPNE1-228ENST00000498814 FBXO18Q8NFZ0 1043 aa17.74■□□□□ 0.43
CPNE1-228ENST00000498814 OXER1Q8TDS5 423 aa17.74■□□□□ 0.43
CPNE1-228ENST00000498814 DIS3LQ8TF46 1054 aaKnown RBP17.74■□□□□ 0.43
CPNE1-228ENST00000498814 COPS5Q92905 334 aa17.74■□□□□ 0.43
CPNE1-228ENST00000498814 EMID1Q96A84 441 aaPredicted RBP17.74■□□□□ 0.43
CPNE1-228ENST00000498814 PAWRQ96IZ0 340 aaKnown RBP17.74■□□□□ 0.43
CPNE1-228ENST00000498814 CDHR1Q96JP9 859 aa17.74■□□□□ 0.43
CPNE1-228ENST00000498814 MYADML2A6NDP7 307 aa17.73■□□□□ 0.43
CPNE1-228ENST00000498814 MEIS1O00470 390 aa17.73■□□□□ 0.43
CPNE1-228ENST00000498814 GJB2P29033 226 aa17.73■□□□□ 0.43
CPNE1-228ENST00000498814 CIITAP33076 1130 aa17.73■□□□□ 0.43
CPNE1-228ENST00000498814 ZNF76P36508 570 aa17.73■□□□□ 0.43
CPNE1-228ENST00000498814 USP11P51784 963 aa17.73■□□□□ 0.43
CPNE1-228ENST00000498814 FOSBP53539 338 aa17.73■□□□□ 0.43
CPNE1-228ENST00000498814 IRX5P78411 483 aaPredicted RBP17.73■□□□□ 0.43
CPNE1-228ENST00000498814 SP2Q02086 613 aa17.73■□□□□ 0.43
CPNE1-228ENST00000498814 ARHGAP1Q07960 439 aa17.73■□□□□ 0.43
CPNE1-228ENST00000498814 MTMR1Q13613 665 aa17.73■□□□□ 0.43
CPNE1-228ENST00000498814 NONOQ15233 471 aaKnown RBP eCLIP17.73■□□□□ 0.43
CPNE1-228ENST00000498814 FSCN1Q16658 493 aaKnown RBP17.73■□□□□ 0.43
CPNE1-228ENST00000498814 GNASQ5JWF2 1037 aa17.73■□□□□ 0.43
CPNE1-228ENST00000498814 PCSK9Q8NBP7 692 aaKnown RBP17.73■□□□□ 0.43
CPNE1-228ENST00000498814 OR6J1Q8NGC5 347 aa17.73■□□□□ 0.43
CPNE1-228ENST00000498814 TBCKQ8TEA7 893 aa17.73■□□□□ 0.43
CPNE1-228ENST00000498814 SENP7Q9BQF6 1050 aa17.73■□□□□ 0.43
CPNE1-228ENST00000498814 PHF24Q9UPV7 400 aa17.73■□□□□ 0.43
CPNE1-228ENST00000498814 SMC3Q9UQE7 1217 aa17.73■□□□□ 0.43
CPNE1-228ENST00000498814 CCDC194A0A1B0GVG4 234 aa17.72■□□□□ 0.43
CPNE1-228ENST00000498814 MOXD2PA6NHM9 499 aa17.72■□□□□ 0.43
CPNE1-228ENST00000498814 A6NJR5 290 aa17.72■□□□□ 0.43
CPNE1-228ENST00000498814 EDIL3O43854 480 aa17.72■□□□□ 0.43
CPNE1-228ENST00000498814 UBA1P22314 1058 aaKnown RBP17.72■□□□□ 0.43
CPNE1-228ENST00000498814 CPT1AP50416 773 aa17.72■□□□□ 0.43
CPNE1-228ENST00000498814 LAMC2Q13753 1193 aa17.72■□□□□ 0.43
CPNE1-228ENST00000498814 NEDD9Q14511 834 aa17.72■□□□□ 0.43
CPNE1-228ENST00000498814 SAFBQ15424 915 aaKnown RBP eCLIP17.72■□□□□ 0.43
CPNE1-228ENST00000498814 KCNA10Q16322 511 aa17.72■□□□□ 0.43
CPNE1-228ENST00000498814 CELF3Q5SZQ8 465 aaKnown RBP17.72■□□□□ 0.43
CPNE1-228ENST00000498814 DHX37Q8IY37 1157 aaKnown RBP17.72■□□□□ 0.43
CPNE1-228ENST00000498814 DIS3L2Q8IYB7 885 aaKnown RBP17.72■□□□□ 0.43
CPNE1-228ENST00000498814 CYP2W1Q8TAV3 490 aa17.72■□□□□ 0.43
CPNE1-228ENST00000498814 TNFRSF25Q93038 417 aa17.72■□□□□ 0.43
CPNE1-228ENST00000498814 INTS4Q96HW7 963 aaKnown RBP17.72■□□□□ 0.43
CPNE1-228ENST00000498814 C11orf49Q9H6J7 331 aa17.72■□□□□ 0.43
CPNE1-228ENST00000498814 IGLV3-22A0A075B6J6 115 aa17.71■□□□□ 0.43
CPNE1-228ENST00000498814 BTBD18B2RXH4 712 aa17.71■□□□□ 0.43
CPNE1-228ENST00000498814 FAM86B1E9PN63 330 aa17.71■□□□□ 0.43
CPNE1-228ENST00000498814 ZEB2O60315 1214 aa17.71■□□□□ 0.43
CPNE1-228ENST00000498814 GGPS1O95749 300 aa17.71■□□□□ 0.43
CPNE1-228ENST00000498814 FAM86B2P0C5J1 330 aa17.71■□□□□ 0.43
CPNE1-228ENST00000498814 ACLYP53396 1101 aa17.71■□□□□ 0.43
CPNE1-228ENST00000498814 BEX3Q00994 111 aa17.71■□□□□ 0.43
CPNE1-228ENST00000498814 GUCY1B3Q02153 619 aa17.71■□□□□ 0.43
CPNE1-228ENST00000498814 NR5A1Q13285 461 aa17.71■□□□□ 0.43
CPNE1-228ENST00000498814 BRDTQ58F21 947 aaPredicted RBP17.71■□□□□ 0.43
CPNE1-228ENST00000498814 MYSM1Q5VVJ2 828 aa17.71■□□□□ 0.43
CPNE1-228ENST00000498814 HSCBQ8IWL3 235 aa17.71■□□□□ 0.43
CPNE1-228ENST00000498814 GIMAP8Q8ND71 665 aaPredicted RBP17.71■□□□□ 0.43
CPNE1-228ENST00000498814 KCNH7Q9NS40 1196 aa17.71■□□□□ 0.43
CPNE1-228ENST00000498814 MKI67P46013 3256 aaKnown RBP17.7■□□□□ 0.42
CPNE1-228ENST00000498814 ATP9AO75110 1047 aa17.7■□□□□ 0.42
CPNE1-228ENST00000498814 ASGR1P07306 291 aa17.7■□□□□ 0.42
CPNE1-228ENST00000498814 KCNA2P16389 499 aa17.7■□□□□ 0.42
CPNE1-228ENST00000498814 INF2Q27J81 1249 aa17.7■□□□□ 0.42
CPNE1-228ENST00000498814 MOXD1Q6UVY6 613 aa17.7■□□□□ 0.42
CPNE1-228ENST00000498814 PIK3AP1Q6ZUJ8 805 aa17.7■□□□□ 0.42
CPNE1-228ENST00000498814 PLA2G4DQ86XP0 818 aa17.7■□□□□ 0.42
CPNE1-228ENST00000498814 SENP6Q9GZR1 1112 aaPredicted RBP17.7■□□□□ 0.42
CPNE1-228ENST00000498814 MLXIPQ9HAP2 919 aa17.7■□□□□ 0.42
CPNE1-228ENST00000498814 ALPK3Q96L96 1907 aa17.69■□□□□ 0.42
CPNE1-228ENST00000498814 CYP3A7-CYP3A51PA0A087WV96 503 aa17.69■□□□□ 0.42
CPNE1-228ENST00000498814 KPNA6O60684 536 aa17.69■□□□□ 0.42
CPNE1-228ENST00000498814 ARP10275 920 aa17.69■□□□□ 0.42
CPNE1-228ENST00000498814 CYP3A7P24462 503 aa17.69■□□□□ 0.42
CPNE1-228ENST00000498814 SETQ01105 290 aaPredicted RBP17.69■□□□□ 0.42
CPNE1-228ENST00000498814 EARS2Q5JPH6 523 aaKnown RBP17.69■□□□□ 0.42
CPNE1-228ENST00000498814 METTL7BQ6UX53 244 aa17.69■□□□□ 0.42
CPNE1-228ENST00000498814 NEK8Q86SG6 692 aa17.69■□□□□ 0.42
CPNE1-228ENST00000498814 PPTC7Q8NI37 304 aa17.69■□□□□ 0.42
CPNE1-228ENST00000498814 AFG1LQ8WV93 481 aa17.69■□□□□ 0.42
CPNE1-228ENST00000498814 SPATA33Q96N06 139 aa17.69■□□□□ 0.42
CPNE1-228ENST00000498814 FOXP1Q9H334 677 aaPredicted RBP17.69■□□□□ 0.42
CPNE1-228ENST00000498814 BCAS3Q9H6U6 928 aa17.69■□□□□ 0.42
CPNE1-228ENST00000498814 POLR3EQ9NVU0 708 aa17.69■□□□□ 0.42
CPNE1-228ENST00000498814 A0A1W2PQ45 241 aaPredicted RBP17.68■□□□□ 0.42
CPNE1-228ENST00000498814 A0A1W2PQY0 241 aa17.68■□□□□ 0.42
CPNE1-228ENST00000498814 CABYRO75952 493 aa17.68■□□□□ 0.42
CPNE1-228ENST00000498814 MMP3P08254 477 aa17.68■□□□□ 0.42
CPNE1-228ENST00000498814 PRR16Q569H4 304 aa17.68■□□□□ 0.42
CPNE1-228ENST00000498814 CYFIP1Q7L576 1253 aa17.68■□□□□ 0.42
CPNE1-228ENST00000498814 FERMT2Q96AC1 680 aa17.68■□□□□ 0.42
CPNE1-228ENST00000498814 LENG9Q96B70 501 aa17.68■□□□□ 0.42
CPNE1-228ENST00000498814 MBOAT7Q96N66 472 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms