RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 TTC3P53804 2025 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 DOCK6Q96HP0 2047 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 FNDC1Q4ZHG4 1894 aaPredicted RBP5.94□□□□□ -1.46
CSTF1-207ENST00000498689 ATG2BQ96BY7 2078 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 USP9YO00507 2555 aaPredicted RBP5.94□□□□□ -1.46
CSTF1-207ENST00000498689 ABHD14A-ACY1A0A1B0GW23 586 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 NEURL1BA8MQ27 555 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 C5orf67F2Z3F1 127 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 WDR46O15213 610 aaKnown RBP5.94□□□□□ -1.46
CSTF1-207ENST00000498689 CABYRO75952 493 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 CXCL10P02778 98 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 MMP1P03956 469 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 TROAPQ12815 778 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 NEUROD2Q15784 382 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 SYCE2Q6PIF2 218 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 TSSK4Q6SA08 328 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 PADI6Q6TGC4 694 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 LDHAL6AQ6ZMR3 332 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 SPRYD3Q8NCJ5 442 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 ZBTB44Q8NCP5 570 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 FEZF2Q8TBJ5 459 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 ATP8B4Q8TF62 1192 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 CTAGE1Q96RT6 745 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 KATNBL1Q9H079 304 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 LMAN2LQ9H0V9 348 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 SIL1Q9H173 461 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 TBC1D17Q9HA65 648 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 GMEB2Q9UKD1 530 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 ADAMTS8Q9UP79 889 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 DIS3Q9Y2L1 958 aaKnown RBP5.94□□□□□ -1.46
CSTF1-207ENST00000498689 CHMP3Q9Y3E7 222 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 NR2E1Q9Y466 385 aa5.94□□□□□ -1.46
CSTF1-207ENST00000498689 DDX49Q9Y6V7 483 aaKnown RBP5.94□□□□□ -1.46
CSTF1-207ENST00000498689 SPG11Q96JI7 2443 aa5.93□□□□□ -1.46
CSTF1-207ENST00000498689 PDZD2O15018 2839 aa5.93□□□□□ -1.46
CSTF1-207ENST00000498689 CFHP08603 1231 aa5.93□□□□□ -1.46
CSTF1-207ENST00000498689 WEE2P0C1S8 567 aa5.93□□□□□ -1.46
CSTF1-207ENST00000498689 SUPT20HL2P0C7V6 817 aa5.93□□□□□ -1.46
CSTF1-207ENST00000498689 RHBDL3P58872 404 aa5.93□□□□□ -1.46
CSTF1-207ENST00000498689 FOXO4P98177 505 aa5.93□□□□□ -1.46
CSTF1-207ENST00000498689 CSTF1Q05048 431 aaKnown RBP5.93□□□□□ -1.46
CSTF1-207ENST00000498689 ZNF252P-AS1Q0IIN9 211 aa5.93□□□□□ -1.46
CSTF1-207ENST00000498689 IFIT5Q13325 482 aaKnown RBP5.93□□□□□ -1.46
CSTF1-207ENST00000498689 MBTPS1Q14703 1052 aa5.93□□□□□ -1.46
CSTF1-207ENST00000498689 FAM47CQ5HY64 1035 aa5.93□□□□□ -1.46
CSTF1-207ENST00000498689 KIAA1211LQ6NV74 962 aa5.93□□□□□ -1.46
CSTF1-207ENST00000498689 TLK2Q86UE8 772 aa5.93□□□□□ -1.46
CSTF1-207ENST00000498689 SLF2Q8IX21 1173 aa5.93□□□□□ -1.46
CSTF1-207ENST00000498689 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.93□□□□□ -1.46
CSTF1-207ENST00000498689 ATRIPQ8WXE1 791 aa5.93□□□□□ -1.46
CSTF1-207ENST00000498689 DHX38Q92620 1227 aaKnown RBP5.93□□□□□ -1.46
CSTF1-207ENST00000498689 FGD4Q96M96 766 aa5.93□□□□□ -1.46
CSTF1-207ENST00000498689 PURBQ96QR8 312 aaKnown RBP5.93□□□□□ -1.46
CSTF1-207ENST00000498689 YME1L1Q96TA2 773 aa5.93□□□□□ -1.46
CSTF1-207ENST00000498689 KLK13Q9UKR3 277 aa5.93□□□□□ -1.46
CSTF1-207ENST00000498689 CA14Q9ULX7 337 aa5.93□□□□□ -1.46
CSTF1-207ENST00000498689 GNEQ9Y223 722 aaKnown RBP5.93□□□□□ -1.46
CSTF1-207ENST00000498689 PCDHGA2Q9Y5H1 932 aa5.93□□□□□ -1.46
CSTF1-207ENST00000498689 DYNC1LI2O43237 492 aaPredicted RBP5.92□□□□□ -1.46
CSTF1-207ENST00000498689 POU3F2P20265 443 aaPredicted RBP5.92□□□□□ -1.46
CSTF1-207ENST00000498689 BMPR1AP36894 532 aa5.92□□□□□ -1.46
CSTF1-207ENST00000498689 BTDP43251 543 aa5.92□□□□□ -1.46
CSTF1-207ENST00000498689 SLC4A3P48751 1232 aa5.92□□□□□ -1.46
CSTF1-207ENST00000498689 IKBKEQ14164 716 aa5.92□□□□□ -1.46
CSTF1-207ENST00000498689 TMEM132BQ14DG7 1078 aa5.92□□□□□ -1.46
CSTF1-207ENST00000498689 CSRP2Q16527 193 aa5.92□□□□□ -1.46
CSTF1-207ENST00000498689 ZNF528Q3MIS6 628 aa5.92□□□□□ -1.46
CSTF1-207ENST00000498689 KIAA1755Q5JYT7 1200 aa5.92□□□□□ -1.46
CSTF1-207ENST00000498689 MAMDC4Q6UXC1 1216 aa5.92□□□□□ -1.46
CSTF1-207ENST00000498689 ATG4CQ96DT6 458 aa5.92□□□□□ -1.46
CSTF1-207ENST00000498689 NEK1Q96PY6 1258 aa5.92□□□□□ -1.46
CSTF1-207ENST00000498689 FEZ1Q99689 392 aa5.92□□□□□ -1.46
CSTF1-207ENST00000498689 C11orf84Q9BUA3 381 aaPredicted RBP5.92□□□□□ -1.46
CSTF1-207ENST00000498689 FOXQ1Q9C009 403 aa5.92□□□□□ -1.46
CSTF1-207ENST00000498689 PLAGL2Q9UPG8 496 aa5.92□□□□□ -1.46
CSTF1-207ENST00000498689 MUC22E2RYF6 1773 aaPredicted RBP5.92□□□□□ -1.46
CSTF1-207ENST00000498689 ADGRG4Q8IZF6 3080 aa5.92□□□□□ -1.46
CSTF1-207ENST00000498689 NAV3Q8IVL0 2385 aa5.92□□□□□ -1.46
CSTF1-207ENST00000498689 KIF26AQ9ULI4 1882 aaPredicted RBP5.92□□□□□ -1.46
CSTF1-207ENST00000498689 OTOGQ6ZRI0 2925 aa5.92□□□□□ -1.46
CSTF1-207ENST00000498689 HYAL3O43820 417 aaPredicted RBP5.91□□□□□ -1.46
CSTF1-207ENST00000498689 TBC1D4O60343 1298 aa5.91□□□□□ -1.46
CSTF1-207ENST00000498689 GH2P01242 217 aa5.91□□□□□ -1.46
CSTF1-207ENST00000498689 LDHBP07195 334 aaKnown RBP5.91□□□□□ -1.46
CSTF1-207ENST00000498689 TECP42680 631 aa5.91□□□□□ -1.46
CSTF1-207ENST00000498689 TNFAIP2Q03169 654 aa5.91□□□□□ -1.46
CSTF1-207ENST00000498689 COG2Q14746 738 aa5.91□□□□□ -1.46
CSTF1-207ENST00000498689 SF3A2Q15428 464 aaKnown RBP5.91□□□□□ -1.46
CSTF1-207ENST00000498689 COLEC12Q5KU26 742 aa5.91□□□□□ -1.46
CSTF1-207ENST00000498689 SNRNP48Q6IEG0 339 aaKnown RBP5.91□□□□□ -1.46
CSTF1-207ENST00000498689 NOL8Q76FK4 1167 aaKnown RBP5.91□□□□□ -1.46
CSTF1-207ENST00000498689 LRRC8DQ7L1W4 858 aa5.91□□□□□ -1.46
CSTF1-207ENST00000498689 SPPL3Q8TCT6 385 aa5.91□□□□□ -1.46
CSTF1-207ENST00000498689 SPIRE2Q8WWL2 714 aa5.91□□□□□ -1.46
CSTF1-207ENST00000498689 NELL1Q92832 810 aa5.91□□□□□ -1.46
CSTF1-207ENST00000498689 SEZ6LQ9BYH1 1024 aa5.91□□□□□ -1.46
CSTF1-207ENST00000498689 OSBPL7Q9BZF2 842 aa5.91□□□□□ -1.46
CSTF1-207ENST00000498689 GPR108Q9NPR9 543 aa5.91□□□□□ -1.46
CSTF1-207ENST00000498689 DUSP12Q9UNI6 340 aa5.91□□□□□ -1.46
CSTF1-207ENST00000498689 SIT1Q9Y3P8 196 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms